CX296315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RK5_NEPOL (50S ribosomal protein L5, chloroplastic OS=Nephroselmis olivacea GN=rpl5 PE=3 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 6.293e-46 Identity = 87/142 (61.27%), Postives = 112/142 (78.87%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLKT YL +VP LR++F + NIH+VP I+KIV+N G+GDA+QNAK L+ ++ +L I GQR V TR++ +IA FKIR+ P+GI+VTLRG MY+FLDRLINL LPR RDFQG++ SFDG GNYS+G+ EQ +FPEI YD Sbjct: 4 RLKTFYLNSVVPKLRQQFHHRNIHEVPSIKKIVINRGLGDASQNAKLLDGSLQELTTIAGQRGVITRSKQAIAAFKIRQDMPVGISVTLRGERMYAFLDRLINLALPRIRDFQGMSTKSFDGQGNYSLGLNEQLMFPEINYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_SYNPW (50S ribosomal protein L5 OS=Synechococcus sp. (strain WH7803) GN=rplE PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 8.219e-46 Identity = 87/141 (61.70%), Postives = 113/141 (80.14%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 LK Y E I P L ++ S +N+H+VPK+ K+ VN G+G+AAQNAK LEA++N+LA ITGQ+ V TRA+ +IA FKIR+G P+G AVTLRG MY+FL+RLINL LPR RDF+GV+P SFDG GNY++GV+EQ +FPEI +D Sbjct: 3 LKQRYRETIQPKLLKDLSLSNVHEVPKVVKVTVNRGLGEAAQNAKSLEASVNELAQITGQKVVVTRAKKAIAGFKIRQGMPIGCAVTLRGERMYAFLERLINLALPRIRDFRGVSPKSFDGRGNYTLGVREQIIFPEISFD 143
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_LISW6 (50S ribosomal protein L5 OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=rplE PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.073e-45 Identity = 84/142 (59.15%), Postives = 114/142 (80.28%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK YL++IVP L +F+Y ++ +VPKI+KIV+N G+GDA NAK L++A+ +LALITGQ+PV T+A+NSIA F++REG P+G VTLRG MY FLD+L+ + LPR RDF+GV+ +FDG GNY++GV+EQ +FPEI YD Sbjct: 3 RLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDATANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDKLVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_LISMO (50S ribosomal protein L5 OS=Listeria monocytogenes GN=rplE PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.073e-45 Identity = 84/142 (59.15%), Postives = 114/142 (80.28%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK YL++IVP L +F+Y ++ +VPKI+KIV+N G+GDA NAK L++A+ +LALITGQ+PV T+A+NSIA F++REG P+G VTLRG MY FLD+L+ + LPR RDF+GV+ +FDG GNY++GV+EQ +FPEI YD Sbjct: 3 RLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDATANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDKLVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_LISMH (50S ribosomal protein L5 OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=rplE PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.073e-45 Identity = 84/142 (59.15%), Postives = 114/142 (80.28%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK YL++IVP L +F+Y ++ +VPKI+KIV+N G+GDA NAK L++A+ +LALITGQ+PV T+A+NSIA F++REG P+G VTLRG MY FLD+L+ + LPR RDF+GV+ +FDG GNY++GV+EQ +FPEI YD Sbjct: 3 RLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDATANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDKLVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_LISMF (50S ribosomal protein L5 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=rplE PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.073e-45 Identity = 84/142 (59.15%), Postives = 114/142 (80.28%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK YL++IVP L +F+Y ++ +VPKI+KIV+N G+GDA NAK L++A+ +LALITGQ+PV T+A+NSIA F++REG P+G VTLRG MY FLD+L+ + LPR RDF+GV+ +FDG GNY++GV+EQ +FPEI YD Sbjct: 3 RLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDATANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDKLVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_LISMC (50S ribosomal protein L5 OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=rplE PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.073e-45 Identity = 84/142 (59.15%), Postives = 114/142 (80.28%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK YL++IVP L +F+Y ++ +VPKI+KIV+N G+GDA NAK L++A+ +LALITGQ+PV T+A+NSIA F++REG P+G VTLRG MY FLD+L+ + LPR RDF+GV+ +FDG GNY++GV+EQ +FPEI YD Sbjct: 3 RLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDATANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDKLVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_LISIN (50S ribosomal protein L5 OS=Listeria innocua GN=rplE PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.073e-45 Identity = 84/142 (59.15%), Postives = 114/142 (80.28%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK YL++IVP L +F+Y ++ +VPKI+KIV+N G+GDA NAK L++A+ +LALITGQ+PV T+A+NSIA F++REG P+G VTLRG MY FLD+L+ + LPR RDF+GV+ +FDG GNY++GV+EQ +FPEI YD Sbjct: 3 RLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDATANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDKLVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_BACST (50S ribosomal protein L5 OS=Bacillus stearothermophilus GN=rplE PE=1 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.073e-45 Identity = 84/142 (59.15%), Postives = 112/142 (78.87%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK Y++++VP L +F+Y +I QVPKIEKIV+N G+GDA QN K L++A+ +L LI GQRPV TRA+ SIA F++R+G P+G VTLRG MY FLD+LI++ LPR RDF+GV+ +FDG GNY++G+KEQ +FPEI YD Sbjct: 3 RLKEKYVKEVVPALMSKFNYKSIMQVPKIEKIVINMGVGDAVQNPKALDSAVEELTLIAGQRPVVTRAKKSIAGFRLRQGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFRGVSKKAFDGRGNYTLGIKEQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_DICT6 (50S ribosomal protein L5 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rplE PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.402e-45 Identity = 86/141 (60.99%), Postives = 108/141 (76.60%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 LK Y++++VP + ++F Y N VPKIEKIVVN G+ +A QN +EAA DLA+ITGQRP+ +AR SIA F +R+G P+G+ VTLRG MY+FL +LINL LPR RDF GV+PNSFDG GNYS+G+KEQ VFPEI YD Sbjct: 4 LKQKYIQEVVPAMMKKFGYKNPMAVPKIEKIVVNIGVSEAVQNPGAIEAAARDLAIITGQRPIVRKARKSIANFHLRKGMPIGVKVTLRGERMYAFLYKLINLALPRVRDFSGVSPNSFDGRGNYSLGLKEQLVFPEIEYD 144 The following BLAST results are available for this feature:
BLAST of CX296315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296315 ID=CX296315; Name=CX296315; organism=Citrus clementina; type=EST; length=619bpback to top |