CX296315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_RICBR (50S ribosomal protein L5 OS=Rickettsia bellii (strain RML369-C) GN=rplE PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.705e-39 Identity = 75/142 (52.82%), Postives = 106/142 (74.65%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 R K Y ++I+ L++EFSY N H++P IEKIV+N G+G+A ++K ++ A+NDL LI+GQ+P T AR SIATFK+R+G +G VTLR + MY FL+RL+ + LPR ++F+G + SFDG GN++ G+KEQ VFPEI YD Sbjct: 3 RFKELYQKEIISNLQKEFSYKNKHEIPAIEKIVINMGVGEAIADSKVIDKAVNDLTLISGQKPFVTSARKSIATFKLRDGMKIGCKVTLRKDRMYDFLERLVIVALPRVKEFRGFSYKSFDGKGNFTFGLKEQIVFPEINYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_RICB8 (50S ribosomal protein L5 OS=Rickettsia bellii (strain OSU 85-389) GN=rplE PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.705e-39 Identity = 75/142 (52.82%), Postives = 106/142 (74.65%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 R K Y ++I+ L++EFSY N H++P IEKIV+N G+G+A ++K ++ A+NDL LI+GQ+P T AR SIATFK+R+G +G VTLR + MY FL+RL+ + LPR ++F+G + SFDG GN++ G+KEQ VFPEI YD Sbjct: 3 RFKELYQKEIISNLQKEFSYKNKHEIPAIEKIVINMGVGEAIADSKVIDKAVNDLTLISGQKPFVTSARKSIATFKLRDGMKIGCKVTLRKDRMYDFLERLVIVALPRVKEFRGFSYKSFDGKGNFTFGLKEQIVFPEINYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_PSEHT (50S ribosomal protein L5 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=rplE PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.705e-39 Identity = 74/142 (52.11%), Postives = 107/142 (75.35%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 +L Y +K+V L+E+F ++++ QVP IEKI +N G+G+A + K L+ A+ DLA I+GQ+P+ T+AR S+A FK+REG P+G VTLRG M+ F +RL+++ +PR RDF+GV+ SFDG GNYS+GV+EQ +FPEI YD Sbjct: 3 KLHEVYKDKVVAELQEKFGFSSVMQVPLIEKITLNMGVGEALADKKILDNAVADLAAISGQKPLITKARKSVAGFKVREGYPIGCKVTLRGERMWDFFERLVSIAIPRIRDFRGVSAKSFDGRGNYSMGVREQIIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_PROAC (50S ribosomal protein L5 OS=Propionibacterium acnes GN=rplE PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.705e-39 Identity = 78/147 (53.06%), Postives = 104/147 (70.75%), Query Frame = 3 Query: 177 AEKTGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 A + RLK Y E+I ++EEF Y N +P +EKIVVN G+GDAA ++K ++ A+ D+ ITGQ+P T+AR SIA FK+REG+P+G VTLRG+ M+ F DRL+ L LPR RDF+G+N N FDG GNY+ G+ EQ +F EI D Sbjct: 7 AHEMPRLKKQYREQIRAAMQEEFGYRNPMLIPGLEKIVVNMGVGDAAHDSKVMDGAIRDITAITGQKPQVTKARKSIAQFKLREGQPIGCHVTLRGDRMWEFADRLLTLALPRIRDFRGLNSNQFDGKGNYTFGLSEQVMFLEIDQD 153
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_METCA (50S ribosomal protein L5 OS=Methylococcus capsulatus GN=rplE PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.705e-39 Identity = 76/142 (53.52%), Postives = 103/142 (72.54%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RL+ Y EK+VP L F Y ++ +VP++ KI +N G+G+A + K L+ A+ ++ I GQ+P+ T AR SIA FKIREG P+G VTLR MY FLDRLI++ +PR RDF+G+NP +FDG GNYS+GV+EQ +FPEI YD Sbjct: 3 RLENHYKEKVVPELMARFGYKSVMEVPRLVKITLNMGVGEAVADKKILQNAVENMQAIGGQKPIVTHARKSIAGFKIREGMPVGCKVTLRRARMYEFLDRLISVAIPRIRDFRGLNPKAFDGRGNYSMGVREQIIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_FRAP2 (50S ribosomal protein L5 OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=rplE PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.705e-39 Identity = 78/142 (54.93%), Postives = 102/142 (71.83%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK Y ++V L+ E + NI +VP I+KI +N G+GDAA++ K + A+NDL I GQ+PV T ++ SIA FKIR+G P+G VTLRG MY FLDRLI + +PR RDF+G++ SFDG GNYS+G+KEQ FPEI YD Sbjct: 3 RLKDYYQNEVVAKLKSELNLDNIMEVPAIKKITLNMGVGDAAKDKKIMTFALNDLTAIAGQKPVVTMSKKSIAGFKIRDGWPIGAKVTLRGERMYEFLDRLITIAIPRIRDFRGLSAKSFDGRGNYSLGMKEQISFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_DESVM (50S ribosomal protein L5 OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=rplE PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.705e-39 Identity = 74/142 (52.11%), Postives = 105/142 (73.94%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RL+ Y EK+VP+L++EF+YT+ QVP IEK+ +N G+G A+QN K +E A+ +L I GQ+ V TRA+ SIA+FK+REG P+G VTLR M+ FLD+L+N LPR RDF+G+ FDG GN+++G+KE ++FPE+ D Sbjct: 3 RLEQIYREKVVPVLQKEFNYTSSMQVPGIEKVSLNIGLGAASQNNKLMEEAIKELTAIAGQKAVVTRAKKSIASFKLREGMPIGCRVTLRKERMWDFLDKLMNFALPRVRDFRGIPDRGFDGRGNFTLGIKEHTIFPELEVD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_COREF (50S ribosomal protein L5 OS=Corynebacterium efficiens GN=rplE PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.705e-39 Identity = 74/144 (51.39%), Postives = 106/144 (73.61%), Query Frame = 3 Query: 186 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 T RLK+ Y ++I P L+ +F ++N+ Q+P + K+VVN G+GDAA+++K + A+ DL ITGQ+P RA+ SIA FK+REG P+G VTLRG+ M+ FLDRL+ + LPR RDF+G++ FDGHGNY+ G+ EQ++F EI D Sbjct: 6 TPRLKSRYQDEIRPNLQTQFEFSNVMQIPGVTKVVVNMGVGDAARDSKMINGALEDLTAITGQKPQLRRAKKSIANFKLREGMPIGAKVTLRGDRMWEFLDRLLTVALPRIRDFRGLSDQQFDGHGNYTFGLTEQTMFYEIDVD 149
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_BIFAA (50S ribosomal protein L5 OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=rplE PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 5.705e-39 Identity = 78/148 (52.70%), Postives = 108/148 (72.97%), Query Frame = 3 Query: 174 EAEKTGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 EA T RLK Y E+IVP L +EF Y+N QV +++K+VV+ G+G AA+++K +E A+ DL LITGQ+P T+A+ S+A F +REG+ +G VTLRG M+ FLDRL+ + LPR RDF+G+N + FDG GNY+ G+ EQS+F EI D Sbjct: 7 EAPATPRLKQKYNEQIVPELEKEFHYSNPMQVARVQKVVVSMGVGAAARDSKLIEGAVKDLTLITGQKPKITKAKKSVAQFHLREGQAIGAYVTLRGERMWEFLDRLLTMALPRIRDFRGINGDQFDGQGNYNFGLTEQSMFHEIDPD 154
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_POLNA (50S ribosomal protein L5 OS=Polaromonas naphthalenivorans (strain CJ2) GN=rplE PE=3 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 7.451e-39 Identity = 77/142 (54.23%), Postives = 101/142 (71.13%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RL+ Y EKI P L E+F YT QVP+I KI +N G+ +A + K ++ A+ D+A I GQ+PV T+A+ +IA FKIRE P+G VTLRG MY FLDR + + LPR RDF+G++ +FDG GNY+IGVKEQ +FPEI YD Sbjct: 3 RLQDQYREKIAPALIEKFGYTTPMQVPRITKITLNMGVSEAVADKKVMDNAVADMAKIAGQKPVVTKAKKAIAGFKIREDLPIGCMVTLRGVQMYEFLDRFVTVALPRVRDFRGISGRAFDGRGNYNIGVKEQIIFPEIEYD 144 The following BLAST results are available for this feature:
BLAST of CX296315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296315 ID=CX296315; Name=CX296315; organism=Citrus clementina; type=EST; length=619bpback to top |