CX296315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RK5_PAUCH (50S ribosomal protein L5, organellar chromatophore OS=Paulinella chromatophora GN=rpl5 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.402e-45 Identity = 89/141 (63.12%), Postives = 113/141 (80.14%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 LK Y E I L E S++NIH+VPK+ KI VN G+G+AAQNAK LEA++ +L+ ITGQ+ + TRA+ +IA FKIR+G P+G+AVTLRG+ MYSFL+RLINL LPR RDF+GV+P SFDG GNY++GVKEQ +FPEI YD Sbjct: 3 LKQRYRETIQGKLLTELSFSNIHEVPKVTKITVNRGLGEAAQNAKFLEASITELSNITGQKVLVTRAKKAIAGFKIRQGMPIGVAVTLRGDRMYSFLERLINLALPRIRDFRGVSPKSFDGRGNYTLGVKEQIIFPEISYD 143
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_ROSCS (50S ribosomal protein L5 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=rplE PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.831e-45 Identity = 86/142 (60.56%), Postives = 111/142 (78.17%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK Y ++VP L +EF Y ++ Q P++EKIV+N G+G+A QN+K L+AA +DLA I GQ+PV TRAR SIA FK+R+G P+G+ VTLRG M+SF DRL+NL LPR RDF+GV+ SFDG GNYS+G++EQ VFPEI YD Sbjct: 4 RLKEKYQTEVVPALMQEFQYRSVMQAPRLEKIVLNIGLGEAIQNSKALDAATSDLAAIAGQKPVITRARKSIAAFKVRQGMPIGVMVTLRGPRMWSFFDRLVNLVLPRLRDFRGVSRRSFDGRGNYSLGLREQIVFPEIDYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_PROM2 (50S ribosomal protein L5 OS=Prochlorococcus marinus (strain MIT 9215) GN=rplE PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.831e-45 Identity = 87/141 (61.70%), Postives = 109/141 (77.30%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 LK Y E I P L +E NIHQVPK+ K+ VN G+G+AA N+K LEA++N++A ITGQ+ + TRA+ +IA FKIREG P+G VTLRG+ MYSFL+R INL LPR RDF+GVNP SFDG GNY++GVKEQ +FPEI +D Sbjct: 3 LKNRYKESIRPKLLKELGLKNIHQVPKVVKVNVNRGLGEAASNSKALEASLNEMATITGQKALVTRAKKAIAGFKIREGMPIGCTVTLRGDRMYSFLERFINLALPRIRDFRGVNPKSFDGRGNYTVGVKEQLIFPEISFD 143
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_GEOTN (50S ribosomal protein L5 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplE PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.831e-45 Identity = 84/142 (59.15%), Postives = 111/142 (78.17%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK Y +++VP L +F+Y +I QVPKIEKIV+N G+GDA QN K L++A+ +L LI GQRPV TRA+ SIA F++R+G P+G VTLRG MY FLD+LI++ LPR RDF+GV+ +FDG GNY++G+KEQ +FPEI YD Sbjct: 3 RLKEKYTKEVVPALMSKFNYKSIMQVPKIEKIVINMGVGDAVQNPKALDSAVEELTLIAGQRPVVTRAKKSIAGFRLRQGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFRGVSKKAFDGRGNYTLGIKEQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_DESHY (50S ribosomal protein L5 OS=Desulfitobacterium hafniense (strain Y51) GN=rplE PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.831e-45 Identity = 80/142 (56.34%), Postives = 112/142 (78.87%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK + +I P L+++F+Y N+ Q+PK+EK+V+N G+G+A QN+K ++AA+ DL+ ITGQ+PV TRA+ SIA FK+R G P+G VTLRG+ MY F+DRL+N+ LPR RDF GV+ +FDG GNY++G+KEQ +FPEI YD Sbjct: 3 RLKDKFSNEIAPALQQKFNYKNVMQIPKLEKVVINVGVGEAIQNSKAIDAAVGDLSKITGQKPVVTRAKKSIAAFKLRTGMPIGTKVTLRGDRMYEFVDRLMNVALPRVRDFHGVSDKAFDGRGNYTLGIKEQLIFPEIEYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_DESHD (50S ribosomal protein L5 OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=rplE PE=3 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 1.831e-45 Identity = 80/142 (56.34%), Postives = 112/142 (78.87%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK + +I P L+++F+Y N+ Q+PK+EK+V+N G+G+A QN+K ++AA+ DL+ ITGQ+PV TRA+ SIA FK+R G P+G VTLRG+ MY F+DRL+N+ LPR RDF GV+ +FDG GNY++G+KEQ +FPEI YD Sbjct: 3 RLKDKFSSEIAPALQQKFNYKNVMQIPKLEKVVINVGVGEAIQNSKAIDAAVGDLSKITGQKPVVTRAKKSIAAFKLRTGMPIGTKVTLRGDRMYEFVDRLMNVALPRVRDFHGVSDKAFDGRGNYTLGIKEQLIFPEIEYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_PROMM (50S ribosomal protein L5 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplE PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.391e-45 Identity = 88/141 (62.41%), Postives = 112/141 (79.43%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 LK Y E I P L ++ S +NIH+VPK+ KI VN G+G+AAQNAK LEA++ +LA ITGQ+ V TRA+ +IA FKIR+G P+G AVTLRG MY+FL+RLINL LPR RDF+GV+P SFDG GNY++GV+EQ +FPEI +D Sbjct: 3 LKQRYRETIQPKLLKDLSLSNIHEVPKVLKITVNRGLGEAAQNAKSLEASITELATITGQKVVVTRAKKAIAGFKIRQGMPIGCAVTLRGERMYAFLERLINLALPRIRDFRGVSPKSFDGRGNYTLGVREQLIFPEISFD 143
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_LYSSC (50S ribosomal protein L5 OS=Lysinibacillus sphaericus (strain C3-41) GN=rplE PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.391e-45 Identity = 82/142 (57.75%), Postives = 111/142 (78.17%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK YL ++ P L +F Y ++ Q+PK+EKIV+N G+GDA QN+K L+AA+ +L +ITGQ+PV T+A+ SIA F++REG P+G VTLRG MY FLD+LI++ LPR RDF+GV+ +FDG GNY++GVKEQ +FPEI YD Sbjct: 3 RLKEKYLNEVSPALMSKFGYKSVMQLPKVEKIVINMGVGDAVQNSKALDAAVEELTIITGQKPVVTKAKKSIAGFRLREGMPIGAKVTLRGERMYEFLDKLISISLPRVRDFRGVSKKAFDGRGNYTLGVKEQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_LEPBJ (50S ribosomal protein L5 OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=rplE PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.391e-45 Identity = 87/142 (61.27%), Postives = 112/142 (78.87%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RL+T Y ++IVP L ++F + +I QVP++EKIV+N G+G+A N K LEAA+ +LALITGQRPVKT+A+ SIA FKIREG LG VTLRG+ MY FLDRL+N+ LPR RDF+GVN FDG GNY++ +KEQ +FPEI+ D Sbjct: 4 RLRTKYKKEIVPELNKKFKFESIMQVPRLEKIVLNVGMGEAHTNPKALEAAVEELALITGQRPVKTKAKKSIAGFKIREGMSLGCMVTLRGDYMYEFLDRLVNVALPRVRDFKGVNDKGFDGRGNYNMSIKEQIIFPEIKVD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_SYNP6 (50S ribosomal protein L5 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplE PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.123e-45 Identity = 84/141 (59.57%), Postives = 112/141 (79.43%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 LKT Y + IVP L +EF YTNIHQVPK+ K+ +N G+G+ AQNAK LE+++ ++A I GQ+PV TRA+ +IA FKIR G P+G+ VTLRG+ +FL+RLINL LPR RDF+G++P SFDG GNY++G++EQ +FPEI YD Sbjct: 3 LKTKYRDIIVPKLMKEFGYTNIHQVPKVVKVTINRGLGEGAQNAKALESSLAEIAKIAGQKPVVTRAKKAIAGFKIRAGMPVGLMVTLRGDRRDAFLERLINLSLPRIRDFRGISPRSFDGRGNYTLGLREQLIFPEITYD 143 The following BLAST results are available for this feature:
BLAST of CX296315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296315 ID=CX296315; Name=CX296315; organism=Citrus clementina; type=EST; length=619bpback to top |