CX296315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_SYNE7 (50S ribosomal protein L5 OS=Synechococcus elongatus (strain PCC 7942) GN=rplE PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.123e-45 Identity = 84/141 (59.57%), Postives = 112/141 (79.43%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 LKT Y + IVP L +EF YTNIHQVPK+ K+ +N G+G+ AQNAK LE+++ ++A I GQ+PV TRA+ +IA FKIR G P+G+ VTLRG+ +FL+RLINL LPR RDF+G++P SFDG GNY++G++EQ +FPEI YD Sbjct: 3 LKTKYRDIIVPKLMKEFGYTNIHQVPKVVKVTINRGLGEGAQNAKALESSLAEIAKIAGQKPVVTRAKKAIAGFKIRAGMPVGLMVTLRGDRRDAFLERLINLSLPRIRDFRGISPRSFDGRGNYTLGLREQLIFPEITYD 143
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_PROM3 (50S ribosomal protein L5 OS=Prochlorococcus marinus (strain MIT 9303) GN=rplE PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.123e-45 Identity = 87/141 (61.70%), Postives = 112/141 (79.43%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 LK Y E I P L ++ S +NIH+VPK+ KI VN G+G+AAQNAK LEA++ +LA ITGQ+ V TRA+ +IA FKIR+G P+G AVTLRG MY+FL+RLINL LPR RDF+GV+P SFDG GNY++GV+EQ +FPE+ +D Sbjct: 3 LKQRYRETIQPKLLKDLSLSNIHEVPKVLKITVNRGLGEAAQNAKSLEASITELATITGQKVVVTRAKKAIAGFKIRQGMPIGCAVTLRGERMYAFLERLINLALPRIRDFRGVSPKSFDGRGNYTLGVREQLIFPEVSFD 143
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_GEOSW (50S ribosomal protein L5 OS=Geobacillus sp. (strain WCH70) GN=rplE PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.123e-45 Identity = 84/142 (59.15%), Postives = 110/142 (77.46%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK YL+++ P L +F+Y +I QVPKIEKIV+N G+GDA QN K L++A+ +L LI GQ+PV TRA+ SIA F++R G P+G VTLRG MY FLD+LI++ LPR RDF+GV+ SFDG GNY++G+KEQ +FPEI YD Sbjct: 3 RLKEKYLKEVTPALMSKFNYKSIMQVPKIEKIVINMGVGDAVQNPKALDSAVEELTLIAGQKPVVTRAKKSIAGFRLRAGMPIGAKVTLRGERMYDFLDKLISVSLPRVRDFRGVSKKSFDGRGNYTLGIKEQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_BREBN (50S ribosomal protein L5 OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=rplE PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.123e-45 Identity = 82/142 (57.75%), Postives = 110/142 (77.46%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK Y +IVP L +F+YT+I QVPK+EKI++N G+G+A NAK L+ A+ DL +I GQ+PV T+A+ SIA FK+REG P+G VTLRG MY FLD+L+N+ LPR RDF+G++ +FDG GNY++G+KEQ +FPEI YD Sbjct: 4 RLKEKYTSEIVPSLMSKFNYTSIMQVPKVEKIIINMGVGEAVANAKSLDTAIEDLQIIAGQKPVVTKAKKSIAGFKLREGMPIGAKVTLRGERMYHFLDKLMNVSLPRVRDFRGISSKAFDGRGNYTLGLKEQLIFPEIEYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RK5_CHAVU (50S ribosomal protein L5, chloroplastic OS=Chara vulgaris GN=rpl5 PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.123e-45 Identity = 82/142 (57.75%), Postives = 112/142 (78.87%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK YL+ +VP L ++F YTNIHQ+P ++KIV+NCG G+A+QN+K LE + DL++I Q+P+ TRAR +IA F+IR+ P+G+ VTLRG MY+FLDRLI+L LPR +DFQG+N SFDG+GN+ G++EQ +FPEI YD Sbjct: 4 RLKKFYLDNVVPDLYQKFEYTNIHQLPYLKKIVINCGFGEASQNSKFLEGTIKDLSIIASQKPIVTRARKAIAGFQIRKKMPVGVCVTLRGETMYAFLDRLIHLALPRIKDFQGLNWKSFDGYGNFHFGIREQLIFPEIHYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_PROMS (50S ribosomal protein L5 OS=Prochlorococcus marinus (strain AS9601) GN=rplE PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.079e-45 Identity = 86/141 (60.99%), Postives = 109/141 (77.30%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 LK Y E I P L ++ NIHQVPK+ K+ VN G+G+AA N+K LEA++N++A ITGQ+ + TRA+ +IA FKIREG P+G VTLRG+ MYSFL+R INL LPR RDF+GVNP SFDG GNY++GVKEQ +FPEI +D Sbjct: 3 LKNRYKESIRPKLLKDLGLKNIHQVPKVVKVNVNRGLGEAASNSKALEASLNEMATITGQKALVTRAKKAIAGFKIREGMPIGCTVTLRGDRMYSFLERFINLALPRIRDFRGVNPKSFDGRGNYTVGVKEQLIFPEISFD 143
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_PROM9 (50S ribosomal protein L5 OS=Prochlorococcus marinus (strain MIT 9312) GN=rplE PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.079e-45 Identity = 86/141 (60.99%), Postives = 109/141 (77.30%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 LK Y E I P L ++ NIHQVPK+ K+ VN G+G+AA N+K LEA++N++A ITGQ+ + TRA+ +IA FKIREG P+G VTLRG+ MYSFL+R INL LPR RDF+GVNP SFDG GNY++GVKEQ +FPEI +D Sbjct: 3 LKNRYKESIRPKLLKDLGLKNIHQVPKVVKVNVNRGLGEAASNSKSLEASLNEMATITGQKALVTRAKKAIAGFKIREGMPIGCTVTLRGDRMYSFLERFINLALPRIRDFRGVNPKSFDGRGNYTVGVKEQLIFPEISFD 143
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_PROM0 (50S ribosomal protein L5 OS=Prochlorococcus marinus (strain MIT 9301) GN=rplE PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.079e-45 Identity = 86/141 (60.99%), Postives = 109/141 (77.30%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 LK Y E I P L ++ NIHQVPK+ K+ VN G+G+AA N+K LEA++N++A ITGQ+ + TRA+ +IA FKIREG P+G VTLRG+ MYSFL+R INL LPR RDF+GVNP SFDG GNY++GVKEQ +FPEI +D Sbjct: 3 LKNRYKESIRPKLLKDLGLKNIHQVPKVVKVNVNRGLGEAASNSKALEASLNEMATITGQKALVTRAKKAIAGFKIREGMPIGCTVTLRGDRMYSFLERFINLALPRIRDFRGVNPKSFDGRGNYTVGVKEQLIFPEISFD 143
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_LACSS (50S ribosomal protein L5 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=rplE PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.079e-45 Identity = 84/144 (58.33%), Postives = 111/144 (77.08%), Query Frame = 3 Query: 186 TGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 T RLK Y++++ P L E+F+YT+ QVPKIEKIV+N G+GDA NAK L+ A+ +L LI GQ+P+ T+A+ SIA F++REG P+G VTLRG MY FLD+L+N+ LPR RDF GV+ SFDG GNY++GV+EQ +FPEI YD Sbjct: 2 TNRLKEKYVKEMTPALIEKFNYTSSMQVPKIEKIVLNMGVGDAVSNAKNLDKAVEELGLIAGQKPLITKAKKSIAGFRLREGMPIGAKVTLRGERMYDFLDKLVNVSLPRVRDFHGVSAKSFDGRGNYTLGVREQLIFPEIDYD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_EUBR3 (50S ribosomal protein L5 OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=rplE PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.079e-45 Identity = 84/142 (59.15%), Postives = 109/142 (76.76%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RL+ Y +I + ++F Y N ++PK++KIVVN G+G+A +NAK LEAA+ D+ ITGQ+ V T+A+N+IA FKIREG P+G VTLRG MY F DRLINL LPR RDF+GVNPN+FDG GNY++G+KEQ +FPEI YD Sbjct: 3 RLREQYENEIKDAMIKKFGYKNAMEIPKLDKIVVNMGVGEAKENAKVLEAAVKDMEAITGQKAVTTKAKNAIANFKIREGMPIGCKVTLRGEKMYEFADRLINLALPRVRDFRGVNPNAFDGRGNYALGIKEQIIFPEIEYD 144 The following BLAST results are available for this feature:
BLAST of CX296315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296315 ID=CX296315; Name=CX296315; organism=Citrus clementina; type=EST; length=619bpback to top |