CX296315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_BACHD (50S ribosomal protein L5 OS=Bacillus halodurans GN=rplE PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.079e-45 Identity = 84/142 (59.15%), Postives = 112/142 (78.87%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK Y ++IVP L E+F+Y+++ VPK+EKIVVN G+GDA QNAK L+ A+ +L ITGQ+P+ T+A+ SIA FK+REG P+G VTLRG MY FLD+LI++ LPR RDF+G++ +FDG GNY++GVKEQ +FPEI YD Sbjct: 3 RLKEKYQKEIVPSLTEKFNYSSVMAVPKLEKIVVNMGVGDAVQNAKALDKAVEELTEITGQKPIITKAKKSIAGFKLREGMPIGAKVTLRGERMYEFLDKLISVSLPRVRDFRGISKKAFDGRGNYTLGVKEQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_SYNS3 (50S ribosomal protein L5 OS=Synechococcus sp. (strain CC9311) GN=rplE PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.328e-45 Identity = 86/141 (60.99%), Postives = 112/141 (79.43%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 LK Y E I P L ++ S +NIH+VPK+ K+ VN G+G+AA NAK LEA++N+LA ITGQ+ V TRA+ +IA FKIR+G P+G AVTLRG+ MY+FL+R INL LPR RDF+GV+P SFDG GNY++GV+EQ +FPEI +D Sbjct: 3 LKQRYRETIQPKLLKDLSLSNIHEVPKVLKVTVNRGLGEAATNAKSLEASVNELAQITGQKVVITRAKKAIAAFKIRQGMPIGCAVTLRGDRMYAFLERFINLALPRIRDFRGVSPKSFDGRGNYTVGVREQIIFPEISFD 143
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_LEPIN (50S ribosomal protein L5 OS=Leptospira interrogans GN=rplE PE=3 SV=2) HSP 1 Score: 180.644 bits (457), Expect = 5.328e-45 Identity = 86/142 (60.56%), Postives = 113/142 (79.58%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RL+T Y ++IVP L ++F +++I QVP++EKIV+N G+G+A N K LEAA+ +LALITGQRPVKT+A+ SIA FKIREG LG VTLRG+ MY FLDRL+N+ LPR RDF+GV+ FDG GNY++ +KEQ +FPEI+ D Sbjct: 4 RLRTKYKKEIVPELNKKFKFSSIMQVPRLEKIVLNVGMGEAHTNPKALEAAVEELALITGQRPVKTKAKKSIAGFKIREGMSLGCMVTLRGDYMYEFLDRLVNVALPRVRDFKGVSEKGFDGRGNYNMSIKEQIIFPEIKVD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_LEPIC (50S ribosomal protein L5 OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=rplE PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.328e-45 Identity = 86/142 (60.56%), Postives = 113/142 (79.58%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RL+T Y ++IVP L ++F +++I QVP++EKIV+N G+G+A N K LEAA+ +LALITGQRPVKT+A+ SIA FKIREG LG VTLRG+ MY FLDRL+N+ LPR RDF+GV+ FDG GNY++ +KEQ +FPEI+ D Sbjct: 4 RLRTKYKKEIVPELNKKFKFSSIMQVPRLEKIVLNVGMGEAHTNPKALEAAVEELALITGQRPVKTKAKKSIAGFKIREGMSLGCMVTLRGDYMYEFLDRLVNVALPRVRDFKGVSEKGFDGRGNYNMSIKEQIIFPEIKVD 145
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_EXIS2 (50S ribosomal protein L5 OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=rplE PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.328e-45 Identity = 82/142 (57.75%), Postives = 111/142 (78.17%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK Y ++IV ++ E+F+YT++ Q PK++KIV+N G+GDA N K L+ A+ +L L+TGQ+P+ T+A+ SIA FK+REG P+G VTLRG MY FLD+LIN+ LPR RDF+GV+ SFDG GNY++GVKEQ +FPEI YD Sbjct: 3 RLKAKYQDEIVKVMMEKFNYTSVMQAPKVDKIVINMGVGDAVTNTKALDMAVEELQLLTGQKPLITKAKKSIAGFKLREGMPIGAKVTLRGERMYEFLDKLINVSLPRVRDFRGVSKKSFDGRGNYTLGVKEQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_BARHE (50S ribosomal protein L5 OS=Bartonella henselae GN=rplE PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 5.328e-45 Identity = 84/149 (56.38%), Postives = 113/149 (75.84%), Query Frame = 3 Query: 171 SEAEKTGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 +E ++T R+KT Y E + L+E+F+Y N+ Q+P+++KIV+N GIG+A ++K A DL LITGQ+ V TRARNSIATFK+REG PLG VTLR + M+ FLDRL+ + LPR RDF+G+NP SFDG GN+++G+KE VFPEI YD Sbjct: 2 AEEKQTPRMKTHYFEVVRKTLQEKFNYKNVMQIPRVDKIVINMGIGEATADSKKPSIAAEDLGLITGQKAVVTRARNSIATFKVREGMPLGAKVTLRKDRMFEFLDRLVTIALPRVRDFRGLNPKSFDGRGNFAMGIKEHIVFPEINYD 150
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_MOOTA (50S ribosomal protein L5 OS=Moorella thermoacetica (strain ATCC 39073) GN=rplE PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 6.958e-45 Identity = 82/142 (57.75%), Postives = 109/142 (76.76%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK YL++I L+ +F Y NI ++PK+EKIV+N G+ +A QN K ++ A+ DL ITGQ+PV T+A+ SIA FK+R+G +G VTLRG+ MY FLDRLIN+ LPR RDF GV+PNSFDG GNY++G++EQ +FPEI YD Sbjct: 3 RLKEKYLQEIRKALQAKFGYKNIMEIPKLEKIVINMGVSEATQNPKAIDNAVQDLMTITGQKPVVTKAKKSIAAFKLRQGTSIGCKVTLRGDRMYEFLDRLINVALPRVRDFHGVSPNSFDGRGNYTLGIREQLIFPEIEYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_BACSU (50S ribosomal protein L5 OS=Bacillus subtilis GN=rplE PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 6.958e-45 Identity = 83/142 (58.45%), Postives = 110/142 (77.46%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK Y ++I P L +F+Y ++ QVPKIEKIV+N G+GDA QNAK +++A+ +L I GQ+PV TRA+ SIA F++REG P+G VTLRG MY FLD+LI++ LPR RDF+GV+ SFDG GNY++G+KEQ +FPEI YD Sbjct: 3 RLKEKYNKEIAPALMTKFNYDSVMQVPKIEKIVINMGVGDAVQNAKAIDSAVEELTFIAGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGERMYDFLDKLISVSLPRVRDFRGVSKKSFDGRGNYTLGIKEQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_BACP2 (50S ribosomal protein L5 OS=Bacillus pumilus (strain SAFR-032) GN=rplE PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 6.958e-45 Identity = 82/142 (57.75%), Postives = 109/142 (76.76%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK Y+++I P L +F Y ++ QVPKIEKIV+N G+GDA QNAK ++ A+ +L I GQ+PV TRA+ SIA F++REG P+G VTLRG MY FLD+LI++ LPR RDF+G++ SFDG GNY++G+KEQ +FPEI YD Sbjct: 3 RLKEKYVKEITPALVSKFEYKSVMQVPKIEKIVINMGVGDAVQNAKAIDTAVEELTFIAGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGERMYDFLDKLISVSLPRVRDFRGISKKSFDGRGNYTLGIKEQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_BACLD (50S ribosomal protein L5 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rplE PE=3 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 6.958e-45 Identity = 82/142 (57.75%), Postives = 110/142 (77.46%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK Y ++I P L ++F Y ++ QVPKIEKIV+N G+GDA QNAK +++A+ +L I GQ+PV TRA+ SIA F++REG P+G VTLRG MY FLD+LI++ LPR RDF+G++ SFDG GNY++G+KEQ +FPEI YD Sbjct: 3 RLKEKYNKEITPALMKKFEYKSVMQVPKIEKIVINMGVGDAVQNAKAIDSAVEELTFIAGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGERMYDFLDKLISVSLPRVRDFRGISKKSFDGRGNYTLGIKEQLIFPEIDYD 144 The following BLAST results are available for this feature:
BLAST of CX296315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296315 ID=CX296315; Name=CX296315; organism=Citrus clementina; type=EST; length=619bpback to top |