CX296315
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_MACCJ (50S ribosomal protein L5 OS=Macrococcus caseolyticus (strain JCSC5402) GN=rplE PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.550e-44 Identity = 82/142 (57.75%), Postives = 112/142 (78.87%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK +L +I P + ++F Y++I +VPKIEKIVVN GIGDA QN+K L++A+ +L ITGQ+P+ T+A+ SIATF++REG P+G VTLRG MY F D+L+N+ LPR RDF+G++ +FDG GNY++GVKEQ +FPEI YD Sbjct: 3 RLKEKFLNEITPEMMKKFEYSSIMEVPKIEKIVVNMGIGDAVQNSKVLDSAVEELQAITGQKPMVTKAKKSIATFRLREGMPIGAKVTLRGERMYEFFDKLVNVSLPRVRDFRGISNKAFDGRGNYTLGVKEQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_GLOVI (50S ribosomal protein L5 OS=Gloeobacter violaceus GN=rplE PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.550e-44 Identity = 80/142 (56.34%), Postives = 113/142 (79.58%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 R+K Y ++VP L+E+F+YTN+ QVPKI KIV+N G+G+A+QNAK L+ ++ ++A I GQ+PV TRA+ +IA FK+R G P+G+ VTLR MY FLDRL+++ LPR RDF+GV+P +FDG GNY++G++EQ +FPEI YD Sbjct: 6 RMKDKYNREVVPRLQEQFNYTNLMQVPKISKIVINRGLGEASQNAKALDGSIAEVARIAGQKPVVTRAKKAIAGFKLRAGVPVGVTVTLRARRMYEFLDRLVSVALPRIRDFRGVSPKAFDGRGNYTLGLREQLIFPEIEYD 147
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_DICTD (50S ribosomal protein L5 OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=rplE PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.550e-44 Identity = 84/141 (59.57%), Postives = 107/141 (75.89%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 L+ Y++++VP + +F Y N VPKIEKIVVN G+ +A QN +EAA DLA+ITGQ+P+ +AR SIA F +R+G P+G+ VTLRG MY+FL +LINL LPR RDF GV+PNSFDG GNYS+G+KEQ VFPEI YD Sbjct: 4 LREKYIKEVVPAMMRKFGYKNPMAVPKIEKIVVNIGVSEAVQNPGAIEAAARDLAIITGQKPIVRKARKSIANFHLRKGMPIGLKVTLRGERMYAFLYKLINLALPRVRDFSGVSPNSFDGRGNYSLGLKEQLVFPEIEYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_CLOPH (50S ribosomal protein L5 OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=rplE PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.550e-44 Identity = 83/142 (58.45%), Postives = 108/142 (76.06%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK Y +I+ ++++F Y N Q+PK++KIV+N G+G+A NAK LEAA+ D+ +I GQ+ V T+AR S+A FK+REG +G VTLRG MY F DRLINL LPR RDF+GVNPN+FDG GNY++GVKEQ +FPEI YD Sbjct: 3 RLKEIYKNEIMAGMQKKFGYKNEMQIPKLDKIVINMGVGEAKDNAKALEAAVKDMEIIAGQKAVITKARKSVANFKLREGVAIGCKVTLRGEKMYEFADRLINLALPRVRDFRGVNPNAFDGRGNYALGVKEQLIFPEIEYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_BARQU (50S ribosomal protein L5 OS=Bartonella quintana GN=rplE PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.550e-44 Identity = 85/149 (57.05%), Postives = 112/149 (75.17%), Query Frame = 3 Query: 171 SEAEKTGRLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 +E ++T R+KT Y E I L+E+F+Y N Q+P+++K+VVN GIG+A ++K A DL LITGQ+ V TRARNSIATFK+REG PLG VTLR + M+ FLDRL+ + LPR RDF+G+NP SFDG GN+++G+KE VFPEI YD Sbjct: 2 AEEKQTPRMKTRYFEVIRKTLQEKFNYKNAMQIPRVDKVVVNMGIGEATIDSKRPSLAAEDLGLITGQKAVVTRARNSIATFKVREGMPLGAKVTLRKDRMFEFLDRLVTIALPRVRDFRGLNPKSFDGRGNFAMGIKEHIVFPEINYD 150
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_BACA2 (50S ribosomal protein L5 OS=Bacillus amyloliquefaciens (strain FZB42) GN=rplE PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.550e-44 Identity = 82/142 (57.75%), Postives = 110/142 (77.46%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK Y ++I P L +F+Y ++ QVPKIEKIV+N G+GDA QNAK +++A+ +L I GQ+PV TRA+ SIA F++REG P+G VTLRG MY FLD+LI++ LPR RDF+G++ SFDG GNY++G+KEQ +FPEI YD Sbjct: 3 RLKEKYNKEISPALMTKFNYDSVMQVPKIEKIVINMGVGDAVQNAKAIDSAVEELTFIAGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGERMYDFLDKLISVSLPRVRDFRGISKKSFDGRGNYTLGIKEQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_PROM1 (50S ribosomal protein L5 OS=Prochlorococcus marinus (strain NATL1A) GN=rplE PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.025e-44 Identity = 82/141 (58.16%), Postives = 112/141 (79.43%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 LKT Y E I P L ++ N+HQVPK++K+ +N G+G+AA N+K LEA++ ++A I+GQ+ + TRA+ +IATFKIR+G P+G +VTLRG+ MY+FL+R INL LPR RDF+GV+P SFDG GNY+IGVKEQ +FPEI +D Sbjct: 3 LKTRYRETIRPKLLKDLGLKNVHQVPKVQKVTLNRGLGEAATNSKALEASLKEMATISGQKALVTRAKKAIATFKIRQGMPIGCSVTLRGDRMYAFLERFINLALPRIRDFRGVSPKSFDGRGNYTIGVKEQLIFPEITFD 143
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_GEOSF (50S ribosomal protein L5 OS=Geobacter sp. (strain FRC-32) GN=rplE PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.025e-44 Identity = 84/142 (59.15%), Postives = 112/142 (78.87%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RL Y +++VP L ++F+Y NI QVPK+EKIV+N G+G+A QN K L++A++++ALI GQ+PV T+A+ SIA FK+R+G P+G AVTLR MY FLDRLIN+ LPR RDF+G++ FDG GNYS+GVKEQ +FPEI YD Sbjct: 3 RLNELYNKELVPQLMKDFNYRNIMQVPKLEKIVINMGLGEAIQNVKILDSAVSEMALIAGQKPVITKAKKSIAGFKLRQGMPIGCAVTLRREKMYEFLDRLINVSLPRVRDFKGISGKGFDGKGNYSLGVKEQLIFPEIDYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_DESRM (50S ribosomal protein L5 OS=Desulfotomaculum reducens (strain MI-1) GN=rplE PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.025e-44 Identity = 80/142 (56.34%), Postives = 108/142 (76.06%), Query Frame = 3 Query: 192 RLKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 RLK YL ++ P L ++F Y NI QVPK+EK+++N G+G+A QN+K ++AA+ DL ITGQRP+ T+A+ SIA FK+R G +G VTLRG MY F+DRL N+ LPR RDF+G++ SFDG GNY++G+KEQ +FPEI YD Sbjct: 3 RLKDKYLNEVQPNLMQKFGYKNIMQVPKLEKVIINIGLGEAVQNSKAVDAAVGDLMAITGQRPITTKAKKSIAAFKLRAGMTIGTKVTLRGERMYEFVDRLFNVALPRVRDFRGISDKSFDGRGNYTMGLKEQLIFPEIEYD 144
BLAST of CX296315 vs. ExPASy Swiss-Prot
Match: RL5_DESAA (50S ribosomal protein L5 OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rplE PE=3 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.025e-44 Identity = 77/141 (54.61%), Postives = 112/141 (79.43%), Query Frame = 3 Query: 195 LKTTYLEKIVPLLREEFSYTNIHQVPKIEKIVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARNSIATFKIREGEPLGIAVTLRGNMMYSFLDRLINLGLPRTRDFQGVNPNSFDGHGNYSIGVKEQSVFPEIRYD 617 L+T YLE + P L+EEF Y+N Q+P++ K+V+N G+G+A QN K LE A+++L LI+GQ+PV T+A+ SIA FK+REG P+G+ TLR + MY FL++L+N+ LPR RDF+G++P +FDG GNY++G++EQ +FPEI YD Sbjct: 4 LRTEYLENVAPKLQEEFGYSNAMQIPRLSKVVLNMGLGEAIQNNKILEGAVDELTLISGQKPVVTKAKKSIAAFKLREGMPIGVTATLRRDRMYDFLNKLVNVTLPRVRDFRGISPKAFDGRGNYTLGIREQIIFPEINYD 144 The following BLAST results are available for this feature:
BLAST of CX296315 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296315 ID=CX296315; Name=CX296315; organism=Citrus clementina; type=EST; length=619bpback to top |