CX296317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_TRIEI (Photosystem I reaction center subunit XI OS=Trichodesmium erythraeum (strain IMS101) GN=psaL PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.821e-26 Identity = 57/148 (38.51%), Postives = 84/148 (56.76%), Query Frame = 1 Query: 181 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLL 624 +QP GDPF+G L TPI+ S ++ NLP YR +SP+LRG+EVG+AHG+ +VGP+ K GPLR++ + V+I +ICL+ YG+ SF P A D L+T++GW++ + G + A+FLL Sbjct: 10 VQPYKGDPFVGHLSTPISDSDFTRAFIGNLPIYRPGLSPILRGLEVGMAHGYFIVGPWTKLGPLRDSAVANLGGLISTIALVLIATICLSAYGLVSFQGKSPEGA------------DPLKTSEGWSQFTGGFFIGAMGGAVVAFFLL 145
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_SYNY3 (Photosystem I reaction center subunit XI OS=Synechocystis sp. (strain PCC 6803) GN=psaL PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.908e-26 Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 1 Query: 175 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNL 639 QV+Q NGDPF+G L TPI+ S ++ NLPAYR +SP+LRG+EVG+AHG+ L+GP+ GPLR++E +++ + L+ YG+ +F G + D LQTADGW++ + G AYFLL L++ Sbjct: 6 QVVQAYNGDPFVGHLSTPISDSAFTRTFIGNLPAYRKGLSPILRGLEVGMAHGYFLIGPWTLLGPLRDSEYQYIGGLIGALALILVATAALSSYGLVTFQ-------------GEQGSGDTLQTADGWSQFAAGFFVGGMGGAFVAYFLLENLSV 147
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_ODOSI (Photosystem I reaction center subunit XI OS=Odontella sinensis GN=psaL PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.908e-26 Identity = 58/126 (46.03%), Postives = 80/126 (63.49%), Query Frame = 1 Query: 181 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGW 558 I+P N DPF+G L TPITSS + L NLPAYR ++PLLRG+E+GLAHG+ L+GPFVK GPLRN++I ++IL++ LTIYG+A+F +G+ + + + LQT W Sbjct: 5 IKPYNDDPFVGHLATPITSSSITRAILKNLPAYRFGLTPLLRGLEIGLAHGYFLMGPFVKLGPLRNSDIALFSGFLSTIGLILILTLGLTIYGVAAFGQGQTT-----------ENSNDLQTKKAW 119
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_CYAP4 (Photosystem I reaction center subunit XI OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=psaL PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.519e-25 Identity = 57/150 (38.00%), Postives = 84/150 (56.00%), Query Frame = 1 Query: 175 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLL 624 ++I+P NGDPF G L TPI+ S ++ NLPAYR +SP+LRG+E+G+AHG+ L+GP+VK GPLR++++ ++I + CL YGI SF + E + P L TA+GW++ G A+ LL Sbjct: 8 ELIKPYNGDPFTGHLSTPISDSDFTRTFIGNLPAYRKGLSPILRGLEIGMAHGYFLIGPWVKLGPLRDSDVANLGGLISGIALILIATACLAAYGIVSFQKEEAAANP-------------LNTAEGWSQFTAGFFVGATGGAFVAFTLL 144
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_CYAME (Photosystem I reaction center subunit XI OS=Cyanidioschyzon merolae GN=psaL PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.519e-25 Identity = 60/148 (40.54%), Postives = 80/148 (54.05%), Query Frame = 1 Query: 181 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLL 624 I+P N DPF+G L TPI SS L YLS LP YR VSP LRG+E+G+AHG+ L+GPFV+ GPLRNT+I +VIL++ + +YG SF + L++ DGW + + G +AY LL Sbjct: 5 IKPYNNDPFVGHLATPINSSSLTRAYLSQLPIYRRGVSPFLRGLEIGMAHGYFLIGPFVQLGPLRNTDIKYLAGLLSAIGLIVILTLGMLLYGAVSFT----------------NDSQDLESVDGWRQLASGFLLGAVGGAGFAYLLL 136
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_PORYE (Photosystem I reaction center subunit XI OS=Porphyra yezoensis GN=psaL PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.985e-25 Identity = 60/156 (38.46%), Postives = 86/156 (55.13%), Query Frame = 1 Query: 175 QVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNLP 642 + I+P N DPF+G+L TP+++S NLPAYR +SPLLRG+E+G+AHG+ L+GPF K GPLR T++ ++IL+ CL++YG SF R D LQT++GW + + G +AY LL N+P Sbjct: 3 EFIKPYNDDPFVGNLSTPVSTSSFSKGTSRNLPAYRRGLSPLLRGLEIGMAHGYFLIGPFDKLGPLRGTDVALLAGFLSSVGLIIILTTCLSMYGNVSFT--------------RADSKDPLQTSEGWGQFTAGFLVGAVGGSGFAYLLL--ANIP 142
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_PHATR (Photosystem I reaction center subunit XI OS=Phaeodactylum tricornutum GN=psaL PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.541e-25 Identity = 60/126 (47.62%), Postives = 79/126 (62.70%), Query Frame = 1 Query: 181 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGW 558 I+P N DPF+G L TPITSS + L NLPAYR ++PLLRG+E+GLAHG+ L+GPFVK GPLR++EI +VIL++ LTIYG+A+F G+ T + + LQT W Sbjct: 5 IKPYNDDPFVGHLATPITSSAVTRAILQNLPAYRFGLTPLLRGLEIGLAHGYFLMGPFVKLGPLRDSEIGLLAGFLSTVGLIVILTLGLTIYGVAAF--GQEKT--------QSSNENDLQTKKAW 120
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_ANASP (Photosystem I reaction center subunit XI OS=Anabaena sp. (strain PCC 7120) GN=psaL PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.194e-24 Identity = 57/159 (35.85%), Postives = 85/159 (53.46%), Query Frame = 1 Query: 145 KAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFL 621 K + S+ +V+ P DP G+LETP+ +SPL+ W+++NLPAYR ++P RG+EVG+AHG+ L GPF K GPLR+ VV+ ++ L++Y N P+ +T+ PD Q+ +GW I G + AYFL Sbjct: 9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGMAHGYFLFGPFAKLGPLRDAANANLAGLLGAIGLVVLFTLALSLYA----NSNPPTALASVTV---PNPPDAFQSKEGWNNFASAFLIGGIGGAVVAYFL 160
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_THAPS (Photosystem I reaction center subunit XI OS=Thalassiosira pseudonana GN=psaL PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.743e-24 Identity = 57/126 (45.24%), Postives = 75/126 (59.52%), Query Frame = 1 Query: 181 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGW 558 I+P N DPF+G L TPITSS L L NLPAYR ++PLLRG+E+GLAHG+ L+GPF + GPLRN++I ++IL++ LTIYG A+F + K +LQT W Sbjct: 5 IKPYNDDPFVGHLATPITSSSLTRALLKNLPAYRFGLTPLLRGLEIGLAHGYFLIGPFAQLGPLRNSDIGLLAGFLSTIGLILILTLGLTIYGAAAFGQ-------------EKSNGSELQTKKSW 117
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_ANAVT (Photosystem I reaction center subunit XI OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=psaL PE=1 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 3.743e-24 Identity = 57/159 (35.85%), Postives = 84/159 (52.83%), Query Frame = 1 Query: 145 KAIQSEKPTYQVIQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFL 621 K + S+ +V+ P DP G+LETP+ +SPL+ W+++NLPAYR ++P RG+EVG+AHG+ L GPF K GPLR+ VV+ ++ L++Y N P +T+ PD Q+ +GW I G + AYFL Sbjct: 9 KNLPSDPRNREVVFPAGRDPQWGNLETPVNASPLVKWFINNLPAYRPGLTPFRRGLEVGMAHGYFLFGPFAKLGPLRDAANANLAGLLGAIGLVVLFTLSLSLYA----NSNPPKALASVTV---PNPPDAFQSKEGWNNFASAFLIGGIGGAVVAYFL 160 The following BLAST results are available for this feature:
BLAST of CX296317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296317 ID=CX296317; Name=CX296317; organism=Citrus clementina; type=EST; length=684bpback to top |