CX296317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_PROMA (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus GN=psaL PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 52/155 (33.55%), Postives = 73/155 (47.10%), Query Frame = 1 Query: 181 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTG--RKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNL 639 + P++ DP +G+L TP+ S +L+NLP YR +SP RG+EVG A G+LL GP+ GPLRNT+ V IL+ L +Y P AP + + P L T GWA G ++A+ L L+L Sbjct: 39 VTPVS-DPCVGNLSTPVNSGYFTKAFLNNLPFYRGGLSPNFRGLEVGAAFGYLLYGPYAMTGPLRNTDYALTAGLLGTIGAVHILTALLVLY-------NAPGKAPNIQPSDCTINNPPADLFTRSGWADFTSGFWLGGCGGAVFAWLLCGTLHL 185
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_PROMS (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain AS9601) GN=psaL PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.432e-15 Identity = 50/149 (33.56%), Postives = 68/149 (45.64%), Query Frame = 1 Query: 199 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGR--KKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNL 639 DP +G+L TP+ S +++NLP YR +SP RG+E G A G+LL GPF GPLRN+E V IL+ L +Y P AP + P L T GWA G ++A+ L+ L+L Sbjct: 44 DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFTMTGPLRNSEFALTAGLLAAIGAVHILTALLVLY-------NAPGKAPNVQPPDATVNNPPKDLFTRAGWADFTSGFWLGGCGGSVFAWLLVGTLHL 185
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_PROM2 (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain MIT 9215) GN=psaL PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.432e-15 Identity = 49/149 (32.89%), Postives = 68/149 (45.64%), Query Frame = 1 Query: 199 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGR--KKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNL 639 DP +G+L TP+ S +++NLP YR +SP RG+E G A G+LL GPF GPLRN+E V I++ L +Y P AP + P L T GWA G ++A+ L+ L+L Sbjct: 44 DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFTMTGPLRNSEFAVTAGLLSAIGAVHIMTALLVLY-------NAPGKAPNVQPPDATVNNPPKDLFTRAGWADFTSGFWLGGCGGAVFAWLLVGTLHL 185
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_PROM0 (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain MIT 9301) GN=psaL PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15 Identity = 49/149 (32.89%), Postives = 67/149 (44.97%), Query Frame = 1 Query: 199 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGR--KKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNL 639 DP +G+L TP+ S +++NLP YR +SP RG+E G A G+LL GPF GPLRN+E V IL+ +Y P AP + P L T GWA G ++A+ L+ L+L Sbjct: 44 DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFTMTGPLRNSEFALTAGLLATIGAVHILTALFVLY-------NAPGKAPNVQPPDATVNNPPKDLFTRAGWADFTSGFWLGGCGGAVFAWLLVGTLHL 185
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_PROMP (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=psaL PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15 Identity = 50/155 (32.26%), Postives = 73/155 (47.10%), Query Frame = 1 Query: 181 IQPINGDPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRK--KEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNL 639 ++P++ DP +G+L TP+ S +++NLP YR +SP RG+E G A G+LL GPF GPLRN++ V IL+ L +Y P AP + P L T GWA G ++A+ L+ L+L Sbjct: 39 VKPVS-DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFSMTGPLRNSDFALTAGLLATIGAVHILTGLLVLY-------NAPGKAPNVQPPDATVYNPPADLFTRTGWADFTSGFWLGGCGGAVFAWLLVGTLHL 185
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_PROM5 (Photosystem I reaction center subunit XI OS=Prochlorococcus marinus (strain MIT 9515) GN=psaL PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15 Identity = 48/149 (32.21%), Postives = 68/149 (45.64%), Query Frame = 1 Query: 199 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGR--KKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLLYVLNL 639 DP +G+L TP+ S +++NLP YR +SP RG+E G A G+LL GPF GPLRN++ V I++ L +Y P AP + P L T GWA G ++A+ L+ L+L Sbjct: 44 DPCVGNLATPVNSGYFTKAFINNLPFYREGISPNFRGLETGAAFGYLLYGPFTMTGPLRNSDFAITAGLLAAIGAVHIMTALLVLY-------NAPGKAPNVQPPDATVNNPPADLFTRAGWADFTSGFWLGGCGGAVFAWLLVGTLHL 185
BLAST of CX296317 vs. ExPASy Swiss-Prot
Match: PSAL_GLOVI (Photosystem I reaction center subunit XI OS=Gloeobacter violaceus GN=psaL PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14 Identity = 48/142 (33.80%), Postives = 70/142 (49.30%), Query Frame = 1 Query: 199 DPFIGSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEIXXXXXXXXXXXXVVILSICLTIYGIASFNEGEPSTAPGLTLTGRKKEPDQLQTADGWAKXXXXXXXXXISGVIWAYFLL 624 DP G+L TP+ +S I W++ NLP R + RG+E+G+AHG+ L+GPF GPLRNTE+ ++I +I L+ G AS E P T RK GW++ + G I+A+ +L Sbjct: 11 DPQEGTLLTPVNNSTAIRWFIDNLPINRVGMDEFTRGLEIGMAHGYWLIGPFALLGPLRNTELGLVAGLVSTIGLLLISTIGLS--GYASLVEDVP------TEFDRK----------GWSRLAGGFLVGGVGGAIFAFAIL 134 The following BLAST results are available for this feature:
BLAST of CX296317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296317 ID=CX296317; Name=CX296317; organism=Citrus clementina; type=EST; length=684bpback to top |