CX296318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_IGNH4 (Elongation factor 1-alpha OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=tuf PE=3 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 2.384e-76 Identity = 134/223 (60.09%), Postives = 174/223 (78.03%), Query Frame = 2 Query: 8 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEP--KRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPSGL 670 SFKYAW+LDKLK ERERG+TID+ KFET KYY T+IDAPGHRDFIKNMITG SQAD A+L++ + G FEAG+S +GQTREH LLA T+G+ Q+I NKMDAT P +S+ RY +IV+ + ++K +G+ +++PFVP+S + GDN+I+RS N+ WYKGPTL++ALDN+ P ++ + PLR+P+QDVY I G+GTVPV RVETGVLK G V F P G+ Sbjct: 54 SFKYAWLLDKLKEERERGVTIDLTFMKFETPKYYFTIIDAPGHRDFIKNMITGASQADAAILVVSARPGEFEAGMSAEGQTREHILLAKTMGIDQIIVAVNKMDATEPPWSEKRYKQIVETLKKFMKGLGFKVDEIPFVPVSAWTGDNIIKRSENMPWYKGPTLVEALDNLKPPSVEKWAKLPLRIPIQDVYSITGVGTVPVGRVETGVLKVGDKVVFMPPGV 276
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1AS_PORPU (Elongation factor 1-alpha S OS=Porphyra purpurea GN=TEF-S PE=2 SV=1) HSP 1 Score: 284.648 bits (727), Expect = 3.114e-76 Identity = 148/252 (58.73%), Postives = 176/252 (69.84%), Query Frame = 2 Query: 2 RGSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPK----YSKARYDEIVKEVSSYLKKVGYNPE--------------------------KVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPSG 667 + SFKYAWVLDKLKAERERGITIDIALWKF T K+ TVIDAPGHRDFIKNMITGTSQAD A+L+ID FEAGI++ G T+EHALLA+TLGVKQ+ NKMD K +++ RY+E+V + L K+G+ + FVPISG+ GDNM+E+STN+ WY GPTL + LD + PKRP++ PLRLPLQDVYKIGGIGTVPV RVETG+LK GM VTF P+G Sbjct: 51 KSSFKYAWVLDKLKAERERGITIDIALWKFSTAKFEYTVIDAPGHRDFIKNMITGTSQADVALLVIDGNN--FEAGIAEGGSTKEHALLAYTLGVKQLAVGINKMDDVKDKDGGPWAQGRYNEVVDYLGPELMKIGFKKKDKGDKKKGDKKEKKDKKDKGEKKYVCSATFVPISGWTGDNMLEKSTNMPWYTGPTLFEVLDAMKPPKRPTEDPLRLPLQDVYKIGGIGTVPVGRVETGILKAGMQVTFEPAG 300
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_AERPE (Elongation factor 1-alpha OS=Aeropyrum pernix GN=tuf PE=3 SV=1) HSP 1 Score: 283.108 bits (723), Expect = 9.059e-76 Identity = 129/221 (58.37%), Postives = 169/221 (76.47%), Query Frame = 2 Query: 8 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPSGL 670 SFK+AW+LDK+K ERERGITID+ KFET KY T+IDAPGHRDF+KNMITG SQAD A+L++ + G FEAG+S +GQTREH LLA T+G++Q+I NKMDA Y + RY+ +V + ++K +GY +K+PF+P+S ++GDN+IERS N+ WY GPTL++ALD + P +P DKPLR+P+Q+VY I G GTVPV RVETGVL+ G V F P G+ Sbjct: 52 SFKFAWILDKMKEERERGITIDLTFMKFETKKYVFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGEFEAGMSTEGQTREHLLLARTMGIEQIIVAVNKMDAPDVNYDQKRYEFVVSVLKKFMKGLGYQVDKIPFIPVSAWKGDNLIERSPNMPWYNGPTLVEALDQLQPPAKPVDKPLRIPVQNVYSIPGAGTVPVGRVETGVLRVGDKVVFMPPGV 272
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A2_EUPCR (Elongation factor 1-alpha 2 OS=Euplotes crassus GN=EFA2 PE=3 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 1.545e-75 Identity = 140/218 (64.22%), Postives = 170/218 (77.98%), Query Frame = 2 Query: 2 RGSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTF 655 + SFKYA+VLD LKAE+ERGITI+ AL +F+T T+IDAPGH+DFIKNMITGTSQAD AVLII + G FE G S++G T++HALLA+T+G+KQ I NKMD T Y + R++EIV+ VS +L K+GY E V ++PISGF+GDNM+E+S NL WYKGPTL +ALD PKRP KPLR+P+QDVYKI GIGTVPV RVETGVLK GM V F Sbjct: 52 KASFKYAFVLDNLKAEQERGITINCALRQFDTPSRSYTIIDAPGHKDFIKNMITGTSQADAAVLIIAAKKGEFEDGFSREGSTKDHALLAYTMGIKQAIVAINKMD--TIDYDEERFNEIVENVSDHLGKIGYKKENVKYIPISGFDGDNMLEQSENLPWYKGPTLTEALDEFKVPKRPIKKPLRVPIQDVYKIAGIGTVPVGRVETGVLKRGMEVQF 267
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_SULSO (Elongation factor 1-alpha OS=Sulfolobus solfataricus GN=tuf PE=1 SV=3) HSP 1 Score: 265.774 bits (678), Expect = 1.497e-70 Identity = 123/220 (55.91%), Postives = 163/220 (74.09%), Query Frame = 2 Query: 8 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPSG 667 S K+A++LD+LK ERERG+TI++ +FET KY+ T+IDAPGHRDF+KNMITG SQAD A+L++ + G +EAG+S +GQTREH +LA T+G+ Q+I NKMD T P Y + RY EIV +VS +++ G+N KV FVP+ GDN+ RS N+ WY GPTL + LD + P +P DKPLR+P+QDVY I G+GTVPV RVE+GVLK G + F P+G Sbjct: 52 SEKFAFLLDRLKEERERGVTINLTFMRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSVEGQTREHIILAKTMGLDQLIVAVNKMDLTEPPYDEKRYKEIVDQVSKFMRSYGFNTNKVRFVPVVAPAGDNITHRSENMKWYNGPTLEEYLDQLELPPKPVDKPLRIPIQDVYSISGVGTVPVGRVESGVLKVGDKIVFMPAG 271
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_EIMBO (Elongation factor 1-alpha (Fragment) OS=Eimeria bovis PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 4.355e-70 Identity = 129/170 (75.88%), Postives = 145/170 (85.29%), Query Frame = 2 Query: 164 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTP-KYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPSGL 670 GTSQAD A+L++ + GGFE SK+GQTREHALLAFTLGVKQMI NKMDATTP KYS+ R++EI EVS YLK VGYNPEKVPFVPISGF GDNM+ERS+N+ WYKG L++ALDN+ PKRPSDKPLRLPLQDVYKIGGIGTVPV RVETG+LKPGMVV F P+GL Sbjct: 1 GTSQADVALLVVPADQGGFEGAFSKEGQTREHALLAFTLGVKQMIVGINKMDATTPDKYSETRFNEIQAEVSRYLKTVGYNPEKVPFVPISGFMGDNMVERSSNMPWYKGKILVEALDNVEPPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGILKPGMVVCFAPTGL 170
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_THEAC (Elongation factor 1-alpha OS=Thermoplasma acidophilum GN=tuf PE=3 SV=2) HSP 1 Score: 263.462 bits (672), Expect = 7.428e-70 Identity = 129/221 (58.37%), Postives = 167/221 (75.57%), Query Frame = 2 Query: 2 RGSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPS 664 + +F++AWV+D+ K ERERG+TID+A KFET KYY T+IDAPGHRDF+KNMITGTSQAD A+L+I + G G+ + QTREHA LA TLGV QM+ NKMDAT+P YS+ RY+E+ + L+ +G+ + + FVPISG++GDN+ + S N+ WYKGPTLL ALD P++P +KPLR+P++DVY I GIGTVPV RVETGVLKPG V F P+ Sbjct: 51 KATFEFAWVMDRFKEERERGVTIDLAHRKFETDKYYFTLIDAPGHRDFVKNMITGTSQADAAILVISAREG---EGVME--QTREHAFLARTLGVPQMVVAINKMDATSPPYSEKRYNEVKADAEKLLRSIGF--KDISFVPISGYKGDNVTKPSPNMPWYKGPTLLQALDAFKVPEKPINKPLRIPVEDVYSITGIGTVPVGRVETGVLKPGDKVIFLPA 264
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_CENSY (Elongation factor 1-alpha OS=Cenarchaeum symbiosum GN=tuf PE=3 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 9.702e-70 Identity = 124/220 (56.36%), Postives = 162/220 (73.64%), Query Frame = 2 Query: 8 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPSG 667 +FKYAWV+D +K ERERGITID+A KFET KY+ T+IDAPGHRDFIKNMITG S+ADCA+L++ + G + I+ GQ REHA L TLGV Q+I NKMD + KYS+ Y + V++ +K VGY E VPF+P+SG++GDN+++RS N+ WYKG TLL++ D+ ++P KPLR+P+QDVY I G+GTVPV RVETG +KPG + PSG Sbjct: 57 TFKYAWVMDNIKDERERGITIDLAFQKFETPKYFFTLIDAPGHRDFIKNMITGASEADCAILVLSAKEGETDTAIAAGGQAREHAFLLKTLGVNQLIVAVNKMDDS--KYSEEAYKKTVEKGEGLVKSVGYKLENVPFIPVSGWKGDNLVKRSENMPWYKGKTLLESFDDFKMAEKPVGKPLRVPIQDVYTITGVGTVPVGRVETGTMKPGDKIVVMPSG 274
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_METMJ (Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 2.161e-69 Identity = 124/221 (56.11%), Postives = 167/221 (75.57%), Query Frame = 2 Query: 2 RGSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPS 664 +GSF++AWV+D LK ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD A+L++ + G E QT+EH L+ TLG+ Q+I NKMDA KY + RY+E+ +++S LK VGY P+ + F+P+S F GDN+ ++S N WYKGPT+LDAL+ ++EP++P++ P+RLP+QDVY I GIGTVPV RVETG++K GM V+F P+ Sbjct: 51 KGSFEFAWVMDSLKEERERGITIDIAHKRFDTDKYYFTVVDCPGHRDFVKNMITGASQADAALLVVAAPDGVME-------QTKEHVFLSRTLGINQLIIGINKMDAA--KYDEKRYNEVKEQLSQLLKMVGYKPDDISFIPMSAFVGDNIAKKSENTPWYKGPTVLDALNALSEPEKPTNLPMRLPIQDVYSISGIGTVPVGRVETGIMKKGMKVSFMPA 262
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_THEPD (Elongation factor 1-alpha OS=Thermofilum pendens (strain Hrk 5) GN=tuf PE=3 SV=1) HSP 1 Score: 260.766 bits (665), Expect = 4.815e-69 Identity = 128/221 (57.92%), Postives = 160/221 (72.40%), Query Frame = 2 Query: 2 RGSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERS-TNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGP 661 R ++KYAWVLDKLK ERE+GITID+ +KFET KY+ T+IDAPGHRDF+KNMITG SQAD A+L++ + G FEAGIS GQTREH LA T+GV Q++ NKMD T YSK RY+EI ++ L+ VGY +++PF+P S +EG N+ +R+ WY GP L +A D EP RP DKPLR+P+QDVY I G+GTVPV RVETGVLK G + P Sbjct: 51 RETWKYAWVLDKLKEEREKGITIDLGFYKFETKKYFFTLIDAPGHRDFVKNMITGASQADVALLVVSAKEGEFEAGISPAGQTREHVFLAKTMGVDQLVVAINKMD--TVNYSKERYEEIKNQLIRLLRMVGYKVDEIPFIPTSAWEGVNVSKRTPEKTPWYDGPCLYEAFDFFKEPPRPIDKPLRIPIQDVYSIKGVGTVPVGRVETGVLKVGDKIIINP 269 The following BLAST results are available for this feature:
BLAST of CX296318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296318 ID=CX296318; Name=CX296318; organism=Citrus clementina; type=EST; length=674bpback to top |