CX296318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_THEGJ (Elongation factor 1-alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=tuf PE=3 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 3.571e-64 Identity = 122/219 (55.71%), Postives = 157/219 (71.69%), Query Frame = 2 Query: 8 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPS 664 SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+ +I NKMD Y + ++++ +V LK +GY + P +PIS +EGDN++++S + WYKGPTL++ALD I EP +P DKPLR+P+QDVY I G+GTVPV RVETGVL+ G VV F P+ Sbjct: 51 SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGINHIIVAINKMDMVN--YDQKVFEKVKAQVEKLLKMLGY--KDFPVIPISAWEGDNVVKKSDKMPWYKGPTLIEALDQIPEPPKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPA 258
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_CALMQ (Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=tuf PE=3 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 4.664e-64 Identity = 116/217 (53.46%), Postives = 152/217 (70.05%), Query Frame = 2 Query: 11 FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGP 661 FKYAW++D+LK ERERG+TI+ FET KY+ T+ID PGHRDF+KNMI G SQAD A+L++ + G FE+G+ GQTREH LA+TLG++ +I NKMD Y + RY++I E+S LK + Y+ KVPF+P+S GDN+ +S+N+ WY GP LL+ALD I P RP DKPLRLP+QDV+ I G GTV RVE+GV+K G + P Sbjct: 63 FKYAWIMDRLKEERERGVTIEAMHVGFETPKYFFTIIDLPGHRDFVKNMIVGASQADAALLVVSARPGEFESGVGPQGQTREHLFLAWTLGIRNLIVAVNKMDVV--NYDQKRYEQIKGELSKILKILRYDVNKVPFIPVSAVRGDNIKVKSSNMPWYNGPVLLEALDAIEPPPRPIDKPLRLPIQDVFSITGAGTVITGRVESGVVKVGDTIVALP 277
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_THEON (Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1) GN=tuf PE=3 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.357e-63 Identity = 120/219 (54.79%), Postives = 157/219 (71.69%), Query Frame = 2 Query: 8 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPS 664 SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+ +I NKMD Y + ++ ++ ++V L +GY + P +PIS +EGDN++++S + WY GPTL++ALD I EP +P+DKPLR+P+QDVY I G+GTVPV RVETGVL+ G VV F P+ Sbjct: 51 SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIGHIIVAINKMDMVD--YDEKKFKQVSEQVKKLLMMLGY--KDFPIIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQIPEPPKPTDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPA 258
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_ARCFU (Elongation factor 1-alpha OS=Archaeoglobus fulgidus GN=tuf PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.023e-63 Identity = 116/224 (51.79%), Postives = 155/224 (69.20%), Query Frame = 2 Query: 2 RGSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPSGLT 673 + +F++AWV+D+LK ERERG+TID+A KF+T KYY T++D PGHRDFIKNMITG SQAD AVL++D QTREH LA TLG+ Q+I NKMD Y + Y+ + VS LK VGY +++PF+P+S + GDN+ ++S WY GPTLL+A D + P++ DKPLR+P+QDVY I G+GTVPV RVE+GVL+ G V F P+G++ Sbjct: 51 KATFEFAWVMDRLKEERERGVTIDVAHRKFQTDKYYITIVDCPGHRDFIKNMITGASQADAAVLVMDVVE-------KVQPQTREHIFLARTLGINQIIVAINKMDRVN--YDQKEYEAAKEAVSKLLKMVGYKVDEIPFIPVSAYYGDNVAKKSDKTPWYNGPTLLEAFDLLKPPEKLVDKPLRIPIQDVYSISGVGTVPVGRVESGVLRVGDKVVFEPAGVS 265
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_THECE (Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 5.156e-63 Identity = 118/219 (53.88%), Postives = 155/219 (70.78%), Query Frame = 2 Query: 8 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPS 664 SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ T G QT+EHA LA TLG+ ++ NKMD Y + ++ + ++V L +GY + P +PIS +EGDN++++S + WY GPTL++ALD + EP +P+DKPLR+P+QDVY I G+GTVPV RVETGVL+ G VV F P+ Sbjct: 51 SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAVTDGVMP-------QTKEHAFLARTLGINNILVAVNKMDMVN--YDEKKFKAVAEQVKKLLMMLGY--KNFPIIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQMPEPPKPTDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPA 258
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_PYRHO (Elongation factor 1-alpha OS=Pyrococcus horikoshii GN=tuf PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 8.795e-63 Identity = 120/219 (54.79%), Postives = 155/219 (70.78%), Query Frame = 2 Query: 8 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPS 664 SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y + ++++ +V LK +GY + P +P S + GDN++++S + WY GPTL++ALD I EP++P DKPLR+P+QDVY I G+GTVPV RVETG LK G VV F P+ Sbjct: 51 SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVTINKMDMVN--YDQKVFEKVKAQVEKLLKTLGY--KDFPVIPTSAWNGDNVVKKSDKMPWYNGPTLIEALDQIPEPEKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVGDVVIFEPA 258
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_PYRCJ (Elongation factor 1-alpha OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=tuf PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 8.795e-63 Identity = 115/217 (53.00%), Postives = 147/217 (67.74%), Query Frame = 2 Query: 11 FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGP 661 F +AW+LD+ K ERERG+TI+ FET K + T+ID PGHRDF+KNMI G SQAD A+ +I + G FE I GQ REH L TLG++Q++ NKMDA Y + RY+++ EVS LK +GY+P K+ FVP+S +GDN+ +S N WY+GPTLL+ LD P RP+DKPLR+P+QDV+ I G GTV V RVETGVLK G V P Sbjct: 64 FAFAWILDRFKEERERGVTIEATHVGFETQKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGIQQLVVAVNKMDAVN--YDQKRYEQVKAEVSKLLKLLGYDPSKIHFVPVSAIKGDNVRTKSPNTPWYQGPTLLEVLDTFQPPPRPTDKPLRMPIQDVFSITGAGTVVVGRVETGVLKVGDKVVIVP 278
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAR (Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=tuf PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.149e-62 Identity = 115/217 (53.00%), Postives = 146/217 (67.28%), Query Frame = 2 Query: 11 FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGP 661 F +AW+LD+ K ERERG+TI+ FET K + T+ID PGHRDF+KNMI G SQAD A+ +I + G FE I GQ REH L TLG++Q++ NKMD Y + RY+++ EVS LK +GY+P K+ FVP+S +GDN+ +S+N WY GPTLL+ LD P RP+DKPLRLP+QDV+ I G GTV V RVETGVLK G V P Sbjct: 64 FAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGIQQLVVAVNKMDVVN--YDQKRYEQVKSEVSKLLKLLGYDPSKIHFVPVSAVKGDNVRTKSSNTPWYNGPTLLEVLDTFQPPPRPTDKPLRLPIQDVFSITGAGTVVVGRVETGVLKAGDRVVVVP 278
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_METST (Elongation factor 1-alpha OS=Methanosphaera stadtmanae (strain DSM 3091) GN=tuf PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.149e-62 Identity = 116/223 (52.02%), Postives = 156/223 (69.96%), Query Frame = 2 Query: 5 GSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPSGLT 673 G K+ +V+DKL ERERG+TID+A KFET KY TV+D PGHRDF+KNMITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMD YS+ +++E+ +E+ + + VG+ P VPF+P+S FEGDN+ E+S+N WYKG TL+ LD ++EP +P D PLRLP+QDVY I G+GTVPV R+ETG+LK + F P+G+T Sbjct: 42 GEDKFRFVMDKLGEERERGVTIDLAHAKFETQKYEYTVVDCPGHRDFVKNMITGASQADAAVLVVAANDGIMP-------QTKEHIFLSRTLGINQLIIAINKMDVVD--YSEDKFNELKEELGALISTVGFKPSDVPFIPVSAFEGDNISEKSSNTPWYKGNTLVQELDALDEPDKPVDLPLRLPIQDVYSITGVGTVPVGRIETGILKTAENIAFEPAGVT 255
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_UNCMA (Elongation factor 1-alpha OS=Uncultured methanogenic archaeon RC-I GN=tuf PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.500e-62 Identity = 113/220 (51.36%), Postives = 156/220 (70.91%), Query Frame = 2 Query: 2 RGSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGP 661 +G+F++AWV+D LK ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD A+L+ + G + QT+EH L+ TLG+ Q+I NKMDA Y + RY+E+ +EVS L+ +G+ P+++PF+P S F+G N+ + + WY G T+L+AL+ + EP++P+ PLR+P+QDVY I GIG VPV RVETG++K G V F P Sbjct: 51 KGTFEFAWVMDSLKEERERGITIDIAHRRFDTEKYYFTVVDCPGHRDFVKNMITGASQADAAILVCAAPDGVMQ-------QTKEHIFLSKTLGINQLIIAVNKMDAIN--YDQKRYNEVKEEVSKILRMIGFKPDQIPFIPTSAFKGTNIAKHAEETPWYTGVTILEALNALKEPEKPTQLPLRVPIQDVYTISGIGLVPVGRVETGIMKKGDKVIFRP 261 The following BLAST results are available for this feature:
BLAST of CX296318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296318 ID=CX296318; Name=CX296318; organism=Citrus clementina; type=EST; length=674bpback to top |