CX296318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_PYRIL (Elongation factor 1-alpha OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=tuf PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 1.959e-62 Identity = 117/217 (53.92%), Postives = 146/217 (67.28%), Query Frame = 2 Query: 11 FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGP 661 F +AW+LD+ K ERERG+TI+ FET K + T+ID PGHRDFIKNMI G SQAD A+ +I + G FE I GQ REH L TLGV+Q++ NKMD Y + RY++I EVS LK +GY+P K+ F+P+S +GDN+ +S+N WY GPTLL+ALD P RP DKPLR+P+QDV+ I G GTV V RVETGVLK G V P Sbjct: 64 FAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFIKNMIVGASQADAALFVISARPGEFETAIGPQGQGREHLFLIRTLGVQQIVVAVNKMDIVN--YDQKRYEQIKAEVSKLLKLLGYDPSKIHFIPVSAIKGDNVKTKSSNTPWYNGPTLLEALDTFQPPPRPVDKPLRMPIQDVFTITGAGTVVVGRVETGVLKVGDRVVIVP 278
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAB (Elongation factor 1-alpha OS=Pyrococcus abyssi GN=tuf PE=3 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 1.959e-62 Identity = 119/219 (54.34%), Postives = 155/219 (70.78%), Query Frame = 2 Query: 8 SFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPS 664 SFK+AWV+D+LK ERERGITID+A KFET Y T+IDAPGHRDF+KNMITG SQAD AVL++ +T G QT+EHA LA TLG+K +I NKMD Y + ++++ +V L+ +GY + P +P S + GDN++++S + WY GPTL++ALD I EP++P DKPLR+P+QDVY I G+GTVPV RVETG LK G VV F P+ Sbjct: 51 SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMP-------QTKEHAFLARTLGIKHIIVTINKMDMVN--YDQKVFEKVKAQVEKLLRTLGY--KDFPVIPTSAWNGDNIVKKSDKMPWYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVGDVVIFEPA 258
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_METS3 (Elongation factor 1-alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=tuf PE=3 SV=2) HSP 1 Score: 238.039 bits (606), Expect = 3.342e-62 Identity = 117/221 (52.94%), Postives = 153/221 (69.23%), Query Frame = 2 Query: 5 GSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPSG 667 G K+ +V+DKL ERERG+TID+A KF T KY TV+D PGHRDF+KNMITG SQAD VL++ + G QT+EH L+ TLG+ Q+I NK+D Y +A+++E+ EVS+ +K VG+NP VPF+P+S FEGDN+ + S N WYKG TL+ ALDN+ P++P PLR+P+QDVY I G+GTVPV RVETGV+K G V F P+G Sbjct: 42 GENKFRFVMDKLGEERERGVTIDLAHQKFSTKKYDYTVVDCPGHRDFVKNMITGASQADAGVLVVAADDGVMP-------QTKEHVFLSKTLGINQLIVAINKIDLVD--YDEAKFNELKDEVSALIKTVGFNPADVPFIPVSAFEGDNIKDASPNTSWYKGDTLMQALDNLAAPEKPVSLPLRIPIQDVYSITGVGTVPVGRVETGVMKKGENVIFEPAG 253
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_META3 (Elongation factor 1-alpha OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=tuf PE=3 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.342e-62 Identity = 119/225 (52.89%), Postives = 157/225 (69.78%), Query Frame = 2 Query: 2 RGSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPSGLT 673 + F++A+V+D LK ERERG+TIDIA KFE+ KY T++D PGHRDFIKNMITG SQAD AVL+ D +A QTREH L TLGV Q+ NKMD T YS+ Y +V +S+ L K +GYNP + FVP++ F GDN +++S + WYKGPTL++ +D N P++P++ PLR+P+QDVY I G+GTVPV RVETGV+KPG V F P+G++ Sbjct: 51 KAGFEFAYVMDGLKEERERGVTIDIAHKKFESKKYDVTIVDCPGHRDFIKNMITGASQADAAVLVCDVN----DAKTGLQPQTREHIFLIRTLGVNQLAVAINKMD--TVDYSEEEYKAMVDMLSNQLLKMLGYNPANIHFVPVASFVGDNNVKKSDKMPWYKGPTLVEVIDTFNPPEKPTNLPLRMPIQDVYTITGVGTVPVGRVETGVMKPGDKVVFEPAGVS 269
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAE (Elongation factor 1-alpha OS=Pyrobaculum aerophilum GN=tuf PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 4.365e-62 Identity = 114/217 (52.53%), Postives = 147/217 (67.74%), Query Frame = 2 Query: 11 FKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGP 661 F +AW+LD+ K ERERG+TI+ FET K + T+ID PGHRDF+KNMI G SQAD A+ +I + G FEA I GQ REH L TLGV+Q++ NKMD Y + RY+++ EVS LK +GY+P K+ F+P+S +GDN+ +S+N WY GPTLL+ D+ P+RP DKPLR+P+QDV+ I G GTV V RVETGVLK G V P Sbjct: 64 FAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFEAAIGPQGQGREHLFLIRTLGVQQIVVAVNKMDVVN--YDQKRYEQVKAEVSKLLKLLGYDPSKIHFIPVSAIKGDNIKTKSSNTPWYTGPTLLEVFDSFQPPQRPVDKPLRMPIQDVFTITGAGTVVVGRVETGVLKVGDRVVIVP 278
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_METTH (Elongation factor 1-alpha OS=Methanobacterium thermoautotrophicum GN=tuf PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.270e-61 Identity = 115/223 (51.57%), Postives = 154/223 (69.06%), Query Frame = 2 Query: 5 GSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPSGLT 673 G K+ +V+D+L ERERG+TID+A KFET KY T++D PGHRDF+KNMITG SQAD AVL++ G QT+EH L+ TLG+ Q+I NKMD Y + +++ + EV++ +K VGY P V F+P+S FEGDN+ +S N WYKG TL++ALD++ P++P D PLR+P+QDVY I G+GTVPV RVETGVLK G V F P+G++ Sbjct: 42 GEDKFRFVMDRLSEERERGVTIDLAHAKFETDKYEFTIVDCPGHRDFVKNMITGASQADAAVLVVAVDDGVMP-------QTKEHVFLSRTLGINQLIVAINKMDLVN--YDEEKFNALKDEVAALIKTVGYKPSDVEFIPLSAFEGDNITSKSENTPWYKGKTLVEALDDLEAPEKPVDLPLRIPIQDVYSITGVGTVPVGRVETGVLKKGENVIFEPAGVS 255
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.659e-61 Identity = 115/223 (51.57%), Postives = 157/223 (70.40%), Query Frame = 2 Query: 2 RGSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPSG 667 + F++A+V+D LK ERERG+TID+A KF T KY T++D PGHRDFIKNMITG SQAD AVL+++ ++GI QTREH L TLGV+Q+ NKMD T +S+A Y+E+ K + L K +G+NPE++ FVP++ GDN+ ++S WYKGPT+ + +D P++P++ PLRLP+QDVY I G+GTVPV RVETG++KPG V F P+G Sbjct: 51 KAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDDA--KSGIQP--QTREHVFLIRTLGVRQLAVAVNKMD--TVNFSEADYNELKKMIGDQLLKMIGFNPEQINFVPVASLHGDNVFKKSERTPWYKGPTIAEVIDGFQPPEKPTNLPLRLPIQDVYSITGVGTVPVGRVETGIIKPGDKVVFEPAG 267
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_HALWD (Elongation factor 1-alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=tuf PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.659e-61 Identity = 117/221 (52.94%), Postives = 153/221 (69.23%), Query Frame = 2 Query: 2 RGSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPS 664 +G F++A+V+D L ERERG+TIDIA +F+T YY T++D PGHRDF+KNMITG SQAD AVL++ + G QTREH LA TLG+ ++I NKMD YS+ Y+++ EV LK+V +N ++PIS FEGDN+ E S N W+ GP+LL+AL+N+ EP+ P+D PLRLP+QDVY I GIGTVPV RVETG + PG V+F PS Sbjct: 50 KGGFEFAYVMDNLAEERERGVTIDIAHQEFDTEDYYFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDGVAP-------QTREHVFLARTLGINELIIGVNKMDIVD--YSEETYEDVKTEVDKLLKQVQFNANDAKYIPISAFEGDNVAESSDNTSWFDGPSLLEALNNLPEPQPPTDAPLRLPIQDVYTISGIGTVPVGRVETGTVSPGDDVSFQPS 261
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_NATPD (Elongation factor 1-alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=tuf PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.695e-61 Identity = 116/224 (51.79%), Postives = 156/224 (69.64%), Query Frame = 2 Query: 2 RGSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPSGLT 673 +G F++A+V+D L ERERG+TIDIA +F+T +YY T++D PGHRDF+KNMITG SQAD AVL++ + G QT+EH LA TLG+ ++I NKMD Y + +Y +V EV+ L++V +N E F+P S FEGDN+ E S N WY GP+LL+AL+++ EP+ P+D PLRLP+QDVY I GIGTVPV RVETG+L G V+F PS ++ Sbjct: 51 KGGFEFAYVMDNLAEERERGVTIDIAHQEFDTDEYYFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VQPQTQEHVFLARTLGIDELIIAVNKMDLVD--YDENKYKAVVDEVNQLLEQVRFNTEDAKFIPTSAFEGDNVSEASENTSWYDGPSLLEALNDLPEPQPPTDAPLRLPIQDVYTISGIGTVPVGRVETGILNTGDNVSFQPSDVS 265
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.695e-61 Identity = 115/223 (51.57%), Postives = 157/223 (70.40%), Query Frame = 2 Query: 2 RGSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPGMVVTFGPSG 667 + F++A+V+D LK ERERG+TID+A KF T KY T++D PGHRDFIKNMITG SQAD AVL+++ ++GI QTREH L TLGV+Q+ NKMD T +S+A Y+E+ K + L K +G+NPE++ FVP++ GDN+ ++S WYKGPT+ + +D P++P++ PLRLP+QDVY I G+GTVPV RVETG++KPG V F P+G Sbjct: 51 KAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDDA--KSGIQP--QTREHVFLIRTLGVRQLAVAVNKMD--TVNFSEADYNELKKMIGDQLLKMIGFNPEQINFVPVASLHGDNVFKKSERNPWYKGPTIAEVIDGFQPPEKPTNLPLRLPIQDVYTITGVGTVPVGRVETGIIKPGDKVVFEPAG 267 The following BLAST results are available for this feature:
BLAST of CX296318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296318 ID=CX296318; Name=CX296318; organism=Citrus clementina; type=EST; length=674bpback to top |