CX296318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_EHRCR (Elongation factor Tu OS=Ehrlichia chaffeensis (strain Arkansas) GN=tuf1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27 Identity = 74/205 (36.10%), Postives = 109/205 (53.17%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDW-YKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 +DK E+ RGITI A ++ET + +D PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GVK ++ NK D + + E+ L K GY + + V S + + E + + W K L++AL+ I+ P R DKP + ++DV+ I G GTV R+E GV++ G Sbjct: 49 IDKAPEEKARGITISTAHVEYETENRHYAHVDCPGHADYIKNMITGAAQMDAAILVVSATDGAMP-------QTREHILLAKQVGVKDIVVWMNKCDVVD---DEEMLSLVEMEIRELLSKYGYPGDDIDVVRGSAVKA--LEEETGSGVWSEKIMELMNALEKISLPTREKDKPFLMSIEDVFSIPGRGTVVTGRIERGVIRVG 241
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_BRUSU (Elongation factor Tu OS=Brucella suis GN=tufA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27 Identity = 78/214 (36.45%), Postives = 114/214 (53.27%), Query Frame = 2 Query: 5 GSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 G FK +D ER RGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + A E+V+ EV L K + +++P + S + + S L L+DA+D+ I P+RP D+P +P++DV+ I G GTV RVE G++K G Sbjct: 37 GEFKAYDQIDAAPEERARGITISTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKCD----QVDDAELLELVELEVRELLSKYEFPGDEIPIIKGSALAA--LEDSSKELGEDAIRNLMDAVDSYIPTPERPIDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVG 237
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_BRUSI (Elongation factor Tu OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=tuf1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27 Identity = 78/214 (36.45%), Postives = 114/214 (53.27%), Query Frame = 2 Query: 5 GSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 G FK +D ER RGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + A E+V+ EV L K + +++P + S + + S L L+DA+D+ I P+RP D+P +P++DV+ I G GTV RVE G++K G Sbjct: 37 GEFKAYDQIDAAPEERARGITISTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKCD----QVDDAELLELVELEVRELLSKYEFPGDEIPIIKGSAIAA--LEDSSKELGEDAIRNLMDAVDSYIPTPERPIDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVG 237
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_BRUO2 (Elongation factor Tu OS=Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512) GN=tuf1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27 Identity = 78/214 (36.45%), Postives = 114/214 (53.27%), Query Frame = 2 Query: 5 GSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 G FK +D ER RGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + A E+V+ EV L K + +++P + S + + S L L+DA+D+ I P+RP D+P +P++DV+ I G GTV RVE G++K G Sbjct: 37 GEFKAYDQIDAAPEERARGITISTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKCD----QVDDAELLELVELEVRELLSKYEFPGDEIPIIKGSALAA--LEDSSKELGEDAIRNLMDAVDSYIPTPERPIDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVG 237
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_BRUME (Elongation factor Tu OS=Brucella melitensis GN=tufA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27 Identity = 78/214 (36.45%), Postives = 114/214 (53.27%), Query Frame = 2 Query: 5 GSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 G FK +D ER RGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + A E+V+ EV L K + +++P + S + + S L L+DA+D+ I P+RP D+P +P++DV+ I G GTV RVE G++K G Sbjct: 37 GEFKAYDQIDAAPEERARGITISTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKCD----QVDDAELLELVELEVRELLSKYEFPGDEIPIIKGSALAA--LEDSSKELGEDAIRNLMDAVDSYIPTPERPIDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVG 237
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_BRUC2 (Elongation factor Tu OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=tuf1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27 Identity = 78/214 (36.45%), Postives = 114/214 (53.27%), Query Frame = 2 Query: 5 GSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 G FK +D ER RGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + A E+V+ EV L K + +++P + S + + S L L+DA+D+ I P+RP D+P +P++DV+ I G GTV RVE G++K G Sbjct: 37 GEFKAYDQIDAAPEERARGITISTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKCD----QVDDAELLELVELEVRELLSKYEFPGDEIPIIKGSALAA--LEDSSKELGEDAIRNLMDAVDSYIPTPERPIDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVG 237
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_BRUA2 (Elongation factor Tu OS=Brucella abortus (strain 2308) GN=tuf1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27 Identity = 78/214 (36.45%), Postives = 114/214 (53.27%), Query Frame = 2 Query: 5 GSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 G FK +D ER RGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + A E+V+ EV L K + +++P + S + + S L L+DA+D+ I P+RP D+P +P++DV+ I G GTV RVE G++K G Sbjct: 37 GEFKAYDQIDAAPEERARGITISTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKCD----QVDDAELLELVELEVRELLSKYEFPGDEIPIIKGSALAA--LEDSSKELGEDAIRNLMDAVDSYIPTPERPIDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVG 237
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_ARCB4 (Elongation factor Tu OS=Arcobacter butzleri (strain RM4018) GN=tuf PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.954e-27 Identity = 76/220 (34.55%), Postives = 113/220 (51.36%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDW-YKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG---MVVTFGPSGLT 673 +D ERERGITI + ++ET K + +D PGH D++KNMITG +Q D A+L+I ST G QTREH LL+ +GV ++ NK D P+ + + + E+ L + + P + S F+ + W K L+DA+D I P+R D+ +P++DV+ I G GTV R+E G +K G +V FG + T Sbjct: 50 IDNAPEERERGITIATSHIEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGAILVIASTDGPM-------AQTREHILLSKQVGVPYIVVFMNKEDQLDPQDKEEMLELVEMEIRELLSTYDFPGDDTPIIAGSAFQALEEAKAGAVGPWGEKIVALMDAVDEYIPTPERDIDQAFLMPVEDVFSISGRGTVVTGRIEKGTIKVGEEIEIVGFGDTRKT 262
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_STRSY (Elongation factor Tu OS=Streptococcus suis (strain 05ZYH33) GN=tuf PE=3 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27 Identity = 75/206 (36.41%), Postives = 113/206 (54.85%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLK 634 +D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD+ E L++ +D I EP+R +DKPL LP++DV+ I G GTV R++ G ++ Sbjct: 53 IDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYEDIV-------MELMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_STRS2 (Elongation factor Tu OS=Streptococcus suis (strain 98HAH33) GN=tuf PE=3 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27 Identity = 75/206 (36.41%), Postives = 113/206 (54.85%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLK 634 +D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD+ E L++ +D I EP+R +DKPL LP++DV+ I G GTV R++ G ++ Sbjct: 53 IDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKVDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYEDIV-------MELMNTVDEYIPEPERDTDKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241 The following BLAST results are available for this feature:
BLAST of CX296318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296318 ID=CX296318; Name=CX296318; organism=Citrus clementina; type=EST; length=674bpback to top |