CX296318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_MICLU (Elongation factor Tu OS=Micrococcus luteus GN=tuf PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27 Identity = 75/207 (36.23%), Postives = 109/207 (52.66%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLK 634 +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L ++ ++ P + + EGD W K L+DA+D I +P R DKP +P++DV+ I G GTV R E G LK Sbjct: 52 IDSAPEERQRGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPM-------AQTREHVLLARQVGVPALLVALNKSDMVE---DEELLERVEMEVRQLLSSRSFDVDEAPVIRTSALKALEGDP--------QWVKSVEDLMDAVDEYIPDPVRDKDKPFLMPIEDVFTITGRGTVVTGRAERGTLK 240
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_EHRCJ (Elongation factor Tu OS=Ehrlichia canis (strain Jake) GN=tuf1 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27 Identity = 74/205 (36.10%), Postives = 109/205 (53.17%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDW-YKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 +DK E+ RGITI A ++ET + +D PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GVK ++ NK D + + E+ L K GY + + V S + + E + + W K L++AL+ I+ P R DKP + ++DV+ I G GTV R+E GV++ G Sbjct: 49 IDKAPEEKARGITISTAHVEYETENRHYAHVDCPGHADYIKNMITGAAQMDAAILVVSATDGAMP-------QTREHILLAKQVGVKDIVVWMNKCDVVD---DEEMLSLVEMEIRELLSKYGYPGDDIDVVRGSAVKA--LEEETGSGVWSEKIMELMNALEKISLPVREKDKPFLMSIEDVFSIPGRGTVVTGRIERGVIRVG 241
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_DESAH (Elongation factor Tu OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=tuf PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27 Identity = 76/207 (36.71%), Postives = 109/207 (52.66%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGP--TLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 +DK ERERGITI A ++ET K + +D PGH D+IKNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E+ L K + + P V S + +E T+ D P LLD LD + EP R +DK +P++DV+ I G GTV R++ G++K G Sbjct: 50 IDKAPEERERGITISTAHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSADDGPMP-------QTREHILLARQVGVPSIVVFLNKCDMVD---DEELIELVEMELQELLTKYEFPGDDTPIVRGSALKA---LEADTSDDPAAEPILKLLDVLDEYVKEPVRDTDKDFLMPIEDVFSISGRGTVVTGRIDRGIIKTG 243
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_CORK4 (Elongation factor Tu OS=Corynebacterium kroppenstedtii (strain DSM 44385 / CCUG 35717) GN=tuf PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27 Identity = 82/205 (40.00%), Postives = 114/205 (55.61%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVL 631 +DK E+ERGITI+IA ++ T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L + ++ E P V IS EGD E+S LD L+DA D +I +P R +DKP +P++D++ I G GTV RVE G L Sbjct: 52 IDKAPEEKERGITINIAHVEYSTPKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKCDMVD---DEDLIELVEMEVRELLAEQDFD-EDAPIVHISALKALEGDEKWEQSI-LD------LMDACDESIPDPVRETDKPFLMPIEDIFTITGRGTVVTGRVERGKL 238
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_CHLT3 (Elongation factor Tu OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=tuf PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27 Identity = 74/204 (36.27%), Postives = 113/204 (55.39%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLK 634 +DK E+ERGITI + ++ET + ID PGH D++KNMITG +Q D A+L++ +T G QTREH LLA + V ++ NK+D P+ + E+ + +SSY G+ + +P + +G + + +W K L++A+DN I P R DKP +P++DV+ I G GTV R+E GV+K Sbjct: 50 IDKAPEEKERGITISTSHVEYETPSRHYAHIDCPGHADYVKNMITGAAQMDGAILVVAATDGPMP-------QTREHILLAKQVNVPSIVVFMNKVDIADPELIELVEMELRELLSSY----GFPGDDIPII-----QGSALGALNGEAEWVGKIEELMEAVDNYIPTPVRDVDKPFLMPVEDVFSISGRGTVGTGRIERGVIK 237
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_ANAPZ (Elongation factor Tu OS=Anaplasma phagocytophilum (strain HZ) GN=tuf1 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27 Identity = 74/205 (36.10%), Postives = 110/205 (53.66%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWY-KGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 +DK E+ RGITI A ++ET + +D PGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GVK ++ NK D + + D ++E+ L + GY+ + + V S + +E + W K L+ AL+ I P R DKP + ++DV+ I G GTV R+E GV++ G Sbjct: 48 IDKAPEEKARGITISTAHVEYETEGRHYAHVDCPGHADYIKNMITGAAQMDVAILVVSATDGAMP-------QTREHILLAKQVGVKDIVVWINKCDVVEDEEMLSLVDMEIREL---LSQYGYDGDSIDAVRGSAVKA---LEEDADGPWSDKIMELVGALEKIELPMREKDKPFLMSVEDVFSIPGRGTVVTGRIERGVVRVG 239
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU1_STRAW (Elongation factor Tu 1 OS=Streptomyces avermitilis GN=tuf1 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27 Identity = 75/206 (36.41%), Postives = 111/206 (53.88%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLK 634 +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + V+E+ S + G + V + EGD +W G ++LD + +NI +P+R DKP +P++DV+ I G GTV R+E GVLK Sbjct: 52 IDKAPEERQRGITISIAHVEYQTETRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVDDEEILELVELEVRELLSEYEFPGDDLPVVKVSALKALEGDK--------EW--GQSVLDLMKAVDENIPQPERDVDKPFLMPIEDVFTITGRGTVVTGRIERGVLK 240
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS9 (Elongation factor Tu OS=Synechococcus sp. (strain CC9902) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.016e-26 Identity = 72/206 (34.95%), Postives = 111/206 (53.88%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEG-DNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 +D ERERGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L+ +T G QT+EH LLA +GV ++ NK D + + + E+ L + + +P + +SG + + E +D L+DA+D +I EP+R DKP + ++DV+ I G GTV R+E G++K G Sbjct: 50 IDGAPEERERGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPM-------AQTKEHILLAKQVGVPALVVALNKCDMVD---DEEIIELVEMEIRELLSSYDFPGDDIPVIQVSGLKAIEGEAEWEAKID-----ELMDAVDASIPEPEREVDKPFLMAIEDVFSITGRGTVATGRIERGIVKVG 240
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_SULMW (Elongation factor Tu OS=Sulcia muelleri (strain GWSS) GN=tuf PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.016e-26 Identity = 74/207 (35.75%), Postives = 112/207 (54.11%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 +D E+ERGITI+ + +++T + +D PGH D++KNM+TG +Q D A+L++ +T G QTREH LLA +GV ++ NK+D K E+V+ E+ L K Y+ E +P + +G + + W K TL+ +DN I EP R DKP +P++DV+ I G GTV R+ETG + G Sbjct: 50 IDNAPEEKERGITINTSHVEYQTEIRHYAHVDCPGHADYVKNMVTGAAQMDGAILVVAATDGPMP-------QTREHILLARQVGVPNLVVFMNKVDQVDDK----EILELVEIEIRELLSKYEYDGENIPII-----QGSALGALNGEKKWEKQIETLMKTVDNYIKEPIRNIDKPFLMPIEDVFTITGRGTVATGRIETGTINTG 240
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_CORGL (Elongation factor Tu OS=Corynebacterium glutamicum GN=tuf PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.016e-26 Identity = 79/208 (37.98%), Postives = 113/208 (54.33%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGDNMIERSTNLDWYKGPTLLDAL----DNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVL 631 +DK E+ERGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L + Y+ E+ P V IS EGD W G +L+ + DNI +P R +DKP +P++D++ I G GTV RVE G L Sbjct: 52 IDKAPEEKERGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKCDMVE---DEEIIELVEMEVRELLAEQDYD-EEAPIVHISALKALEGDE--------KW--GKQILELMQACDDNIPDPVRETDKPFLMPIEDIFTITGRGTVVTGRVERGTL 238 The following BLAST results are available for this feature:
BLAST of CX296318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296318 ID=CX296318; Name=CX296318; organism=Citrus clementina; type=EST; length=674bpback to top |