CX296318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBK (Elongation factor Tu OS=Clostridium botulinum (strain Okra / Type B1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.263e-26 Identity = 76/207 (36.71%), Postives = 115/207 (55.56%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I P+R +D+P +P++DV+ I G GTV RVE GVL G Sbjct: 50 IDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATGRVERGVLHTG 242
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBH (Elongation factor Tu OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.263e-26 Identity = 76/207 (36.71%), Postives = 115/207 (55.56%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I P+R +D+P +P++DV+ I G GTV RVE GVL G Sbjct: 50 IDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATGRVERGVLHTG 242
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_CLOB1 (Elongation factor Tu OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.263e-26 Identity = 76/207 (36.71%), Postives = 115/207 (55.56%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKG-PTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV+ ++ NK D + E+V+ EV L + G+ + P V S E ++E N + K L++A+D+ I P+R +D+P +P++DV+ I G GTV RVE GVL G Sbjct: 50 IDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTVATGRVERGVLHTG 242
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_BART1 (Elongation factor Tu OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=tuf1 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.263e-26 Identity = 77/213 (36.15%), Postives = 108/213 (50.70%), Query Frame = 2 Query: 5 GSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 G FK +D ER RGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D D + EV L K + + VP V S ++S D + L+ +D I P+RP D+P +P++DV+ I G GTV RVE GV+K G Sbjct: 37 GEFKAYDQIDAAPEERARGITISTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKVDQVD---DSELLDLVELEVRELLSKYDFPGDDVPIVKGSALAALEDKDKSIGEDAVR--LLMSEVDKYIPTPERPVDQPFLMPIEDVFSISGRGTVVTGRVERGVIKVG 237
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_ANADE (Elongation factor Tu OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=tuf1 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.263e-26 Identity = 76/208 (36.54%), Postives = 110/208 (52.88%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 +DK ERERGITI A +++T K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D K D + EV L + + ++P V + EGD L L++A+D I P+R +DKP +P++DV+ I G GTV RVE G++K G Sbjct: 50 IDKAPEERERGITIATAHVEYQTEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDMVD---DKELLDLVELEVRELLSEYDFPGNEIPIVKGSALKALEGD-----KGELGEQAIFKLMEAVDAYIPTPQRATDKPFLMPVEDVFSISGRGTVATGRVERGIVKVG 242
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU1_STRRA (Elongation factor Tu-1 OS=Streptomyces ramocissimus GN=tuf1 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.263e-26 Identity = 77/203 (37.93%), Postives = 111/203 (54.68%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYKGPTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLK 634 +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G QT+EH LLA +GV ++ NK D + + V+E+ S + G + V + EGD +S LD L+ A+D +I EP+R DKP +P++DV+ I G GTV R+E GVLK Sbjct: 52 IDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYIVVALNKADMVDDEEIMELVELEVRELLSEYEFPGDDLPVVRVSALKALEGDAQWTQSV-LD------LMKAVDESIPEPERDVDKPFLMPIEDVFTITGRGTVVTGRIERGVLK 240
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTM_ARATH (Elongation factor Tu, mitochondrial OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.263e-26 Identity = 74/206 (35.92%), Postives = 110/206 (53.40%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDN-MIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLKPG 640 +DK E++RGITI A ++ET K + +D PGH D++KNMITG +Q D +L++ G QT+EH LLA +GV ++C NK+D + ++E+ S+ K G + + +S +G N I R L L+DA+D I +P R DKP +P++DV+ I G GTV R+E GV+K G Sbjct: 105 IDKAPEEKKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSALSALQGTNDEIGRQAIL------KLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVG 297
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_STROR (Elongation factor Tu OS=Streptococcus oralis GN=tuf PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.955e-26 Identity = 74/206 (35.92%), Postives = 113/206 (54.85%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLK 634 +D ERERGITI+ A ++ET K + IDAPGH D++KNMITG +Q D A+L++ ST G QTREH LL+ +GVK +I NK+D + + + E+ L + + + +P + + EGD+ E L++ +D I EP+R ++KPL LP++DV+ I G GTV R++ G ++ Sbjct: 53 IDAAPEERERGITINTAHVEYETEKRHYAHIDAPGHADYVKNMITGAAQMDGAILVVASTDGPMP-------QTREHILLSRQVGVKHLIVFMNKIDLVD---DEELLELVEMEIRDLLSEYDFPGDDLPVIQGSALKALEGDSKYEDII-------MELMNTVDEYIPEPERDTEKPLLLPVEDVFSITGRGTVASGRIDRGTVR 241
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_PELPB (Elongation factor Tu OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=tuf PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.955e-26 Identity = 75/206 (36.41%), Postives = 110/206 (53.40%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV---PISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVLK 634 +DK ERERGITI A +++T K + ID PGH D+IKNMITG +Q D A+L++ T G QTREH LLA + V ++ NK+D P+ + + E+ L + + + +P V + EGD E++ L+DA+D+ I +P R DKP +P++DV+ I G GTV R+E G +K Sbjct: 50 IDKAPEERERGITISTAHVEYQTKKRHYAHIDCPGHADYIKNMITGAAQMDGAILVVAGTDGPMP-------QTREHILLARQVNVPSLVVFLNKVDIADPEL----IELVELELRELLTQYNFPGDDIPIVKGSALKALEGDPEGEKAI-------MELMDAVDSFIPDPVRDIDKPFLMPVEDVFSISGRGTVGTGRIERGRIK 237
BLAST of CX296318 vs. ExPASy Swiss-Prot
Match: EFTU_NOCFA (Elongation factor Tu OS=Nocardia farcinica GN=tuf PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.955e-26 Identity = 78/206 (37.86%), Postives = 114/206 (55.34%), Query Frame = 2 Query: 29 LDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSTNLDWYKG-PTLLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVSRVETGVL 631 +DK E+ RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L ++ E+ P V +SG EGD W K L+DA+D +I +P R +DKP +P++DV+ I G GTV RVE G++ Sbjct: 52 IDKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVD---DEEILELVEMEVRELLAAQEFD-EEAPVVRVSGLKALEGDP--------KWVKSVEDLMDAVDESIPDPVRETDKPFLMPIEDVFTITGRGTVVTGRVERGII 238 The following BLAST results are available for this feature:
BLAST of CX296318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296318 ID=CX296318; Name=CX296318; organism=Citrus clementina; type=EST; length=674bpback to top |