CX296319
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 9.730e-57 Identity = 106/160 (66.25%), Postives = 128/160 (80.00%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSRAEPQTIKINQPD 534
F TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L + Q +KI PD
Sbjct: 37 FISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKIT-PD 194 HSP 2 Score: 34.2686 bits (77), Expect = 9.730e-57 Identity = 13/25 (52.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGK+C+L RFS+ +F ++FI+ +
Sbjct: 17 SGVGKTCVLFRFSEDAFNSTFISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB8A_HUMAN (Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 9.730e-57 Identity = 106/160 (66.25%), Postives = 128/160 (80.00%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSRAEPQTIKINQPD 534
F TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L + Q +KI PD
Sbjct: 37 FISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKIT-PD 194 HSP 2 Score: 34.2686 bits (77), Expect = 9.730e-57 Identity = 13/25 (52.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGK+C+L RFS+ +F ++FI+ +
Sbjct: 17 SGVGKTCVLFRFSEDAFNSTFISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB8A_CANFA (Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 9.730e-57 Identity = 106/160 (66.25%), Postives = 128/160 (80.00%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSRAEPQTIKINQPD 534
F TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L + Q +KI PD
Sbjct: 37 FISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKIT-PD 194 HSP 2 Score: 34.2686 bits (77), Expect = 9.730e-57 Identity = 13/25 (52.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGK+C+L RFS+ +F ++FI+ +
Sbjct: 17 SGVGKTCVLFRFSEDAFNSTFISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 1.268e-56 Identity = 100/138 (72.46%), Postives = 120/138 (86.96%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 480
F TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++
Sbjct: 37 FISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173 HSP 2 Score: 34.2686 bits (77), Expect = 1.268e-56 Identity = 13/25 (52.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGK+C+L RFS+ +F ++FI+ +
Sbjct: 17 SGVGKTCVLFRFSEDAFNSTFISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 1.268e-56 Identity = 106/160 (66.25%), Postives = 128/160 (80.00%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSRAEPQTIKINQPD 534
F TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++L + Q +KI PD
Sbjct: 37 FISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKRDVND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKIT-PD 194 HSP 2 Score: 34.2686 bits (77), Expect = 1.268e-56 Identity = 13/25 (52.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGK+C+L RFS+ +F ++FI+ +
Sbjct: 17 SGVGKTCVLFRFSEDAFNSTFISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 1.268e-56 Identity = 100/138 (72.46%), Postives = 120/138 (86.96%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 480
F TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D+++ KR V +G+ LA +YGIKF ETSAK N+NVE FF++ARDIK ++
Sbjct: 37 FISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173 HSP 2 Score: 34.2686 bits (77), Expect = 1.268e-56 Identity = 13/25 (52.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGK+C+L RFS+ +F ++FI+ +
Sbjct: 17 SGVGKTCVLFRFSEDAFNSTFISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 1.268e-56 Identity = 100/158 (63.29%), Postives = 129/158 (81.65%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDI----KQRLADTDSRAEPQTIKINQ 528
F TIGIDFKIRTIELDGK+IKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK DM++ KR V +G+ LA +YGIKF E SAK+++NVEE FF++ARDI +++ D++S +KI +
Sbjct: 37 FISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMND-KRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTKLNRKMNDSNSSGAGGPVKITE 193 HSP 2 Score: 36.965 bits (84), Expect = 1.268e-56 Identity = 15/25 (60.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGK+CLL RFS+ +F T+FI+ +
Sbjct: 17 SGVGKTCLLFRFSEDAFNTTFISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 2.156e-56 Identity = 105/160 (65.62%), Postives = 128/160 (80.00%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSRAEPQTIKINQPD 534
F TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF+NIRNWIRNIE+HAS +V K+++GNK D+++ KR V +G+ LA +YGIKF ETSAK N+NVE F+++ARDIK ++L + Q +KI PD
Sbjct: 37 FISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKKLEGNSPQGSNQGVKIT-PD 194 HSP 2 Score: 34.2686 bits (77), Expect = 2.156e-56 Identity = 13/25 (52.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGK+C+L RFS+ +F ++FI+ +
Sbjct: 17 SGVGKTCVLFRFSEDAFNSTFISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB8_DISOM (Ras-related protein Rab-8 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 1.058e-55 Identity = 96/138 (69.57%), Postives = 119/138 (86.23%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 480
F TIGIDFKIRT+ELDGK+IKLQIWDTAGQERFRTITTAYYRGAMGI+ VYD+T+E SF+NI+NWIRNIE+HAS +V ++++GNK DM+E KR V +G+ LA +YGIKF ETSAK+++NVEE F ++ARDI +L
Sbjct: 37 FISTIGIDFKIRTVELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNE-KRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIMTKL 173 HSP 2 Score: 36.965 bits (84), Expect = 1.058e-55 Identity = 15/25 (60.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGK+CLL RFS+ +F T+FI+ +
Sbjct: 17 SGVGKTCLLFRFSEDAFNTTFISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 1.800e-55 Identity = 95/141 (67.38%), Postives = 116/141 (82.27%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 489
F TIGIDFKIRTI++ +R+KLQ+WDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFNNI NW +N++ +A++ V ILVGNK D+DE KR V T +GQALAD++GI F E S+KTN+NVEE F+S+A I+ +A T
Sbjct: 40 FITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDE-KRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKT 179 HSP 2 Score: 39.6614 bits (91), Expect = 1.800e-55 Identity = 18/25 (72.00%), Postives = 20/25 (80.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGKSCLLLRF + FT SFIT +
Sbjct: 20 SGVGKSCLLLRFCEDQFTPSFITTI 44 The following BLAST results are available for this feature:
BLAST of CX296319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296319 ID=CX296319; Name=CX296319; organism=Citrus clementina; type=EST; length=718bpback to top |