CX296319
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB8A_CHICK (Ras-related protein Rab-8A OS=Gallus gallus GN=RAB8A PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 2.346e-55 Identity = 103/160 (64.38%), Postives = 125/160 (78.12%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIK----QRLADTDSRAEPQTIKINQPD 534
F TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF NIRNW+RNIE+HAS +V K+++GNK D ++ KR V +G+ LA +GIKF ETSAK N+N+E FF++ARDIK ++L + Q +KI PD
Sbjct: 37 FISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEKMILGNKCDAND-KRQVSREQGEKLAASFGIKFMETSAKANINIENAFFTLARDIKAKMDKKLEGNSPQGSNQGVKIT-PD 194 HSP 2 Score: 33.113 bits (74), Expect = 2.346e-55 Identity = 13/25 (52.00%), Postives = 19/25 (76.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGK+C L RFS+ +F +FI+ +
Sbjct: 17 SGVGKTCALFRFSEDAFNATFISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 190.66 bits (483), Expect = 4.716e-53 Identity = 92/151 (60.93%), Postives = 119/151 (78.81%), Query Frame = 1
Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRAEPQTIKI 522
TIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTDE SFNN++ W+ I+++ASDNVNK+LVGNK+D+ E+ RA+P +A ADE GI F ETSAK NVE+ F +++ IK+R+A + A P T++I
Sbjct: 40 TIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTEN-RAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPPTVQI 189 HSP 2 Score: 38.891 bits (89), Expect = 4.716e-53 Identity = 17/25 (68.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGKSCLLLRFSD S+ S+I+ +
Sbjct: 17 SGVGKSCLLLRFSDDSYVESYISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB10_PONAB (Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 8.016e-53 Identity = 88/146 (60.27%), Postives = 118/146 (80.82%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 504
F TIGIDFKI+T+EL GK+IKLQIWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+GNK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ + +E
Sbjct: 38 FISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182 HSP 2 Score: 37.3502 bits (85), Expect = 8.016e-53 Identity = 15/25 (60.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGK+C+L RFSD +F T+FI+ +
Sbjct: 18 SGVGKTCVLFRFSDDAFNTTFISTI 42
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB10_MOUSE (Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 8.016e-53 Identity = 88/146 (60.27%), Postives = 118/146 (80.82%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 504
F TIGIDFKI+T+EL GK+IKLQIWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+GNK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ + +E
Sbjct: 38 FISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182 HSP 2 Score: 37.3502 bits (85), Expect = 8.016e-53 Identity = 15/25 (60.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGK+C+L RFSD +F T+FI+ +
Sbjct: 18 SGVGKTCVLFRFSDDAFNTTFISTI 42
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB10_HUMAN (Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 8.016e-53 Identity = 88/146 (60.27%), Postives = 118/146 (80.82%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 504
F TIGIDFKI+T+EL GK+IKLQIWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+GNK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ + +E
Sbjct: 38 FISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182 HSP 2 Score: 37.3502 bits (85), Expect = 8.016e-53 Identity = 15/25 (60.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGK+C+L RFSD +F T+FI+ +
Sbjct: 18 SGVGKTCVLFRFSDDAFNTTFISTI 42
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB10_CANFA (Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 8.016e-53 Identity = 88/146 (60.27%), Postives = 118/146 (80.82%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 504
F TIGIDFKI+T+EL GK+IKLQIWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+GNK DMD+ KR VP KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ + +E
Sbjct: 38 FISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNKCDMDD-KRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKEPNSE 182 HSP 2 Score: 37.3502 bits (85), Expect = 8.016e-53 Identity = 15/25 (60.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGK+C+L RFSD +F T+FI+ +
Sbjct: 18 SGVGKTCVLFRFSDDAFNTTFISTI 42
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 5.128e-52 Identity = 87/146 (59.59%), Postives = 117/146 (80.14%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAE 504
F TIGID KI+T+EL GK+IKLQIWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+GNK DM E KR VP +KG+ +A E+GI+FFETSAK N+N+E+ F ++A DI ++ + +E
Sbjct: 38 FISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDM-EDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182 HSP 2 Score: 37.3502 bits (85), Expect = 5.128e-52 Identity = 15/25 (60.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGK+C+L RFSD +F T+FI+ +
Sbjct: 18 SGVGKTCVLFRFSDDAFNTTFISTI 42
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 1.930e-51 Identity = 87/137 (63.50%), Postives = 113/137 (82.48%), Query Frame = 1
Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 477
F TIGIDFKI+T+EL GK+IKLQIWDTAGQERF TITT+YYRGAMGI+LVYD+T+ SF NI W+RNI++HA+++V ++L+GNK DM E KR V SKG+ +A E+ I+FFETSAK N+N+E+ F ++A DI Q+
Sbjct: 38 FISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDM-EDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQK 173 HSP 2 Score: 37.3502 bits (85), Expect = 1.930e-51 Identity = 15/25 (60.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGK+C+L RFSD +F T+FI+ +
Sbjct: 18 SGVGKTCVLFRFSDDAFNTTFISTI 42
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 5.571e-51 Identity = 90/151 (59.60%), Postives = 116/151 (76.82%), Query Frame = 1
Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRAEPQTIKI 522
TIG+DFKIRT+E DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++ASDNVNK+LVGNK+D+ +K V T +A ADE GI F ETSAK NV++ F ++A IK R+A + A P T++I
Sbjct: 40 TIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDLTANK-VVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANARPATVQI 189 HSP 2 Score: 37.3502 bits (85), Expect = 5.571e-51 Identity = 16/25 (64.00%), Postives = 21/25 (84.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGKSCLLLRF+D S+ S+I+ +
Sbjct: 17 SGVGKSCLLLRFADDSYLDSYISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 5.571e-51 Identity = 88/136 (64.71%), Postives = 112/136 (82.35%), Query Frame = 1
Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA 483
TIG+DFKIRT+ELDGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+ I+++AS+NVNK+LVGNK+D+ SK+ V S +A ADE GI F ETSAK NVE+ F ++A +IK R+A
Sbjct: 40 TIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDL-TSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMA 174 HSP 2 Score: 38.5058 bits (88), Expect = 5.571e-51 Identity = 16/25 (64.00%), Postives = 22/25 (88.00%), Query Frame = 2
Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82
SGVGKSCLLLRF+D ++T S+I+ +
Sbjct: 17 SGVGKSCLLLRFADDTYTESYISTI 41 The following BLAST results are available for this feature:
BLAST of CX296319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296319 ID=CX296319; Name=CX296319; organism=Citrus clementina; type=EST; length=718bpback to top |