CX296319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: DJC27_CHICK (DnaJ homolog subfamily C member 27 OS=Gallus gallus GN=DNAJC27 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 4.027e-16 Identity = 46/158 (29.11%), Postives = 84/158 (53.16%), Query Frame = 1 Query: 64 QFYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS-----DNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKI 522 ++ TIGID+ + +++ + IK+ I+D AG F + +Y+ G++LVYDV + SF+ + W+ ++Q DN+ ++ NK D + R+V S+G+ A+ G +FETSA+T + E+F + I L D + P ++ + Sbjct: 44 KYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFYEVRNEFYKDTQGVILVYDVGQKESFDALDAWLAEMKQELGPHGNMDNIVFVVCANKIDCTK-HRSVDESEGRLWAESRGFLYFETSAQTGEGINEMFQTFYSAIID-LCDNGGKRPPSSMGV 199 HSP 2 Score: 22.7126 bits (47), Expect = 4.027e-16 Identity = 7/23 (30.43%), Postives = 14/23 (60.87%), Query Frame = 2 Query: 14 VGKSCLLLRFSDGSFTTSFITPL 82 VGKSC++ R+ + F ++ + Sbjct: 27 VGKSCIIKRYCEKRFVPKYLATI 49
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB7B_MOUSE (Ras-related protein Rab-7b OS=Mus musculus GN=Rab7b PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.060e-16 Identity = 49/159 (30.82%), Postives = 83/159 (52.20%), Query Frame = 1 Query: 58 YYQFYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQH---ASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKIN 525 + ++ T+G + I LD +KLQIWDT GQERFR++ + +Y+G+ G +L +DVTD SF + W ++ + +++GNK D+++ K + G E + +FE SAK ++NV + F +A R T +IK++ Sbjct: 34 FEEYQTTLGASILSKIIILDDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPMEQSYPMVVLGNKIDLEDRKVSQEVVHG--WCKEKDMPYFEVSAKNDINVVQAFEVLASRALLRYQGTAENHLIDSIKLS 190
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RASK_MONDO (GTPase KRas OS=Monodelphis domestica GN=KRAS PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16 Identity = 46/126 (36.51%), Postives = 73/126 (57.94%), Query Frame = 1 Query: 100 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ-HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ 474 + + +DG+ L I DTAGQE + + Y R G L V+ + + SF +I ++ I++ S++V +LVGNK D+ R V T + Q LA YGI F ETSAKT ++ F+++ R+I++ Sbjct: 42 KQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPS--RTVDTKQAQDLARSYGIPFIETSAKTRQGGDDAFYTLVREIRK 165
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RABL_MIMIV (Probable Rab-related GTPase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R214 PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.303e-16 Identity = 47/142 (33.10%), Postives = 78/142 (54.93%), Query Frame = 1 Query: 76 TIGIDFKIR-TIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSR 498 TIG F + I +GK +KL IWDTAGQERFR+IT YY ++G L+V+DVTD SF+++ WI ++ + ++V NK D+D++ V ++ + + + S+ + V +F + + + + DSR Sbjct: 45 TIGAAFASKQVIAKNGKTLKLNIWDTAGQERFRSITKMYYTNSLGCLVVFDVTDRESFDDVYYWINDLRINCHTTYYILVVANKIDIDKNNWRVSENEIKKFCRDNDCDYVFASSFESDTVNNLFGKMIDKMSEIKINPDSR 186
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: DJC27_RAT (DnaJ homolog subfamily C member 27 OS=Rattus norvegicus GN=Dnajc27 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.804e-16 Identity = 40/133 (30.08%), Postives = 75/133 (56.39%), Query Frame = 1 Query: 64 QFYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS-----DNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVF 447 ++ TIGID+ + +++ + IK+ I+D AG F + +Y+ G++LVYDV + SF+ + +W+ ++Q +N+ ++ NK D + R + S+G+ A+ G +FETSA+T + E+F Sbjct: 44 KYLATIGIDYGVTKVQVRDREIKVNIFDMAGHPFFFEVRNEFYKDTQGVILVYDVGQKDSFDALDSWLAEMKQELGPHGNMENIVFVVCANKIDCSK-HRCIDESEGRLWAESRGFLYFETSAQTGEGINEMF 175 HSP 2 Score: 23.483 bits (49), Expect = 6.804e-16 Identity = 7/23 (30.43%), Postives = 15/23 (65.22%), Query Frame = 2 Query: 14 VGKSCLLLRFSDGSFTTSFITPL 82 VGKSC++ R+ + F + ++ + Sbjct: 27 VGKSCIIKRYCEKRFVSKYLATI 49
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RIT1_HUMAN (GTP-binding protein Rit1 OS=Homo sapiens GN=RIT1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16 Identity = 49/135 (36.30%), Postives = 78/135 (57.78%), Query Frame = 1 Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQ-HASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 477 TI +KIR I +D + L I DTAGQ F + Y R G ++ Y +TD SF+ +R + + I + +D+ +LVGNK+D+ + R V +G ALA E+ FFETSA +++VF ++ R+I+++ Sbjct: 53 TIEDAYKIR-IRIDDEPANLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDL-KQLRQVTKEEGLALAREFSCPFFETSAAYRYYIDDVFHALVREIRRK 185
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAP1A_RAT (Ras-related protein Rap-1A OS=Rattus norvegicus GN=Rap1a PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16 Identity = 46/128 (35.94%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 100 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNI-EQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEY-GIKFFETSAKTNLNVEEVFFSIARDIKQR 477 + +E+D ++ L+I DTAG E+F + Y + G LVY +T +S+FN++++ I +++V ILVGNK D+ E +R V +GQ LA ++ F E+SAK+ +NV E+F+ + R I ++ Sbjct: 42 KQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDL-EDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRK 168
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAP1A_MOUSE (Ras-related protein Rap-1A OS=Mus musculus GN=Rap1a PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16 Identity = 46/128 (35.94%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 100 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNI-EQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEY-GIKFFETSAKTNLNVEEVFFSIARDIKQR 477 + +E+D ++ L+I DTAG E+F + Y + G LVY +T +S+FN++++ I +++V ILVGNK D+ E +R V +GQ LA ++ F E+SAK+ +NV E+F+ + R I ++ Sbjct: 42 KQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDL-EDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRK 168
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAP1A_HUMAN (Ras-related protein Rap-1A OS=Homo sapiens GN=RAP1A PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16 Identity = 46/128 (35.94%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 100 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNI-EQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEY-GIKFFETSAKTNLNVEEVFFSIARDIKQR 477 + +E+D ++ L+I DTAG E+F + Y + G LVY +T +S+FN++++ I +++V ILVGNK D+ E +R V +GQ LA ++ F E+SAK+ +NV E+F+ + R I ++ Sbjct: 42 KQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDL-EDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRK 168
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAP1A_BOVIN (Ras-related protein Rap-1A OS=Bos taurus GN=RAP1A PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16 Identity = 46/128 (35.94%), Postives = 78/128 (60.94%), Query Frame = 1 Query: 100 RTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNI-EQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEY-GIKFFETSAKTNLNVEEVFFSIARDIKQR 477 + +E+D ++ L+I DTAG E+F + Y + G LVY +T +S+FN++++ I +++V ILVGNK D+ E +R V +GQ LA ++ F E+SAK+ +NV E+F+ + R I ++ Sbjct: 42 KQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDL-EDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRK 168 The following BLAST results are available for this feature:
BLAST of CX296319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296319 ID=CX296319; Name=CX296319; organism=Citrus clementina; type=EST; length=718bpback to top |