CX296319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: YPT1_NEUCR (GTP-binding protein ypt1 OS=Neurospora crassa GN=ypt-1 PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.472e-48 Identity = 83/138 (60.14%), Postives = 109/138 (78.99%), Query Frame = 1 Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 489 TIG+DFKIRTIELDGK +KLQIWDTAGQERFRTIT++YYRGA GI +VYDVTD SFNN++ W++ I+++A++ VNK+LVGNK+DM + K+ V + + AD GI F ETSAK NVE+ F ++AR IK+R+ + Sbjct: 40 TIGVDFKIRTIELDGKTVKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNKLLVGNKSDMTD-KKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSS 176 HSP 2 Score: 38.5058 bits (88), Expect = 2.472e-48 Identity = 16/25 (64.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82 SGVGKSCLLLRF+D ++T S+I+ + Sbjct: 17 SGVGKSCLLLRFADDTYTESYISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 2.472e-48 Identity = 85/151 (56.29%), Postives = 116/151 (76.82%), Query Frame = 1 Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA-DTDSRAEPQTIKIN 525 TIG+DFKIRTIELDGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+D+ +K+ V + + AD G+ F ETSAK NVE+ F ++A +IK+R+ S E +KI+ Sbjct: 40 TIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKID 189 HSP 2 Score: 38.5058 bits (88), Expect = 2.472e-48 Identity = 16/25 (64.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82 SGVGKSCLLLRF+D ++T S+I+ + Sbjct: 17 SGVGKSCLLLRFADDTYTESYISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.222e-48 Identity = 84/151 (55.63%), Postives = 116/151 (76.82%), Query Frame = 1 Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA-DTDSRAEPQTIKIN 525 TIG+DFKIRTIELDGK IKLQIWDTAGQERFRT+T++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+D+ +K+ V + + AD G+ F ETSAK NVE+ F ++A +IK+R+ S E +KI+ Sbjct: 40 TIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKID 189 HSP 2 Score: 38.5058 bits (88), Expect = 3.222e-48 Identity = 16/25 (64.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82 SGVGKSCLLLRF+D ++T S+I+ + Sbjct: 17 SGVGKSCLLLRFADDTYTESYISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.222e-48 Identity = 86/151 (56.95%), Postives = 115/151 (76.16%), Query Frame = 1 Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA-DTDSRAEPQTIKIN 525 TIG+DFKIRTIELDGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD S+ N++ W++ I+++AS+NVNK+LVGNK+D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E +KI+ Sbjct: 40 TIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKID 189 HSP 2 Score: 38.5058 bits (88), Expect = 3.222e-48 Identity = 16/25 (64.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82 SGVGKSCLLLRF+D ++T S+I+ + Sbjct: 17 SGVGKSCLLLRFADDTYTESYISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 4.196e-48 Identity = 81/138 (58.70%), Postives = 111/138 (80.43%), Query Frame = 1 Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 480 F TIGIDFKI+T++++GK++KLQ+WDTAGQERFRTITTAYYRGAMGI+LVYDVTDE +F NI+ W + + +HA+D +LVGNK+DM+ R V +G+ALA E GI F E+SAK + NV E+FF++A+ I++++ Sbjct: 49 FITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDME--TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI 184 HSP 2 Score: 36.1946 bits (82), Expect = 4.196e-48 Identity = 16/25 (64.00%), Postives = 19/25 (76.00%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82 SGVGKSCLL+RF + F SFIT + Sbjct: 29 SGVGKSCLLVRFVEDKFNPSFITTI 53
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.212e-47 Identity = 87/152 (57.24%), Postives = 119/152 (78.29%), Query Frame = 1 Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL---ADTDSRAEPQTIKI 522 TIG+DFKIRTIE DGK IKLQIWDTAGQERFRTIT++YYRGA GI++VYD T+ SFNN++ W+ I+++A+++V K+L+GNK DM ESK V T G+ALADE GI F ETSAK ++NVE+ F +IA +IK+++ + + + P T+++ Sbjct: 40 TIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESK-VVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGPGTVQM 190 HSP 2 Score: 33.8834 bits (76), Expect = 1.212e-47 Identity = 14/25 (56.00%), Postives = 20/25 (80.00%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82 S VGKSCLLLRF+D ++ S+I+ + Sbjct: 17 SSVGKSCLLLRFADDAYIDSYISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: YPTM1_MAIZE (GTP-binding protein YPTM1 OS=Zea mays GN=YPTM1 PE=2 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 2.058e-47 Identity = 85/151 (56.29%), Postives = 116/151 (76.82%), Query Frame = 1 Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKINQ 528 TIG+DFKIRT+E++GK +KLQIWDTAGQERFRTIT++YYRGA GI++VYD+TD SFNN++ W+ I+++A+D+V K+LVGNK D+ E+ RAV TS QA A E GI F ETSAK ++NVEE F +++ IK+ A + + E + + Q Sbjct: 40 TIGVDFKIRTVEVEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDLAEN-RAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALERKPSNVVQ 189 HSP 2 Score: 33.8834 bits (76), Expect = 2.058e-47 Identity = 14/25 (56.00%), Postives = 19/25 (76.00%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82 S VGKSC LLRF+D S+ S+I+ + Sbjct: 17 SSVGKSCFLLRFADDSYVDSYISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.059e-47 Identity = 85/151 (56.29%), Postives = 115/151 (76.16%), Query Frame = 1 Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLA-DTDSRAEPQTIKIN 525 TIG+DFKIRTIELDGK IKLQIWDTAGQER RTIT++YYRGA GI++VYDVTD+ S+ N++ W++ I+++AS+NVNK+LVGNK+D+ +K+ V + + AD GI F ETSAK NVE+ F ++A +IK+R+ S E +KI+ Sbjct: 40 TIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDL-TTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGERPNLKID 189 HSP 2 Score: 38.5058 bits (88), Expect = 2.059e-47 Identity = 16/25 (64.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82 SGVGKSCLLLRF+D ++T S+I+ + Sbjct: 17 SGVGKSCLLLRFADDTYTESYISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 2.683e-47 Identity = 82/153 (53.59%), Postives = 115/153 (75.16%), Query Frame = 1 Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTD--SRAEPQTIKINQ 528 TIG+DFKIRT EL+GK +KLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W++ I+++A + VN++LVGNK+DM + K+ V S + AD I F ETSAK + NVE+ F +++R IK+R+ + S ++K+ Q Sbjct: 40 TIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVD-KKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAKSSVKVGQ 191 HSP 2 Score: 38.5058 bits (88), Expect = 2.683e-47 Identity = 16/25 (64.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82 SGVGKSCLLLRF+D ++T S+I+ + Sbjct: 17 SGVGKSCLLLRFADDTYTESYISTI 41
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB1A_DICDI (Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A PE=2 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 5.941e-47 Identity = 83/138 (60.14%), Postives = 109/138 (78.99%), Query Frame = 1 Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRL 480 F TIG+DFKIRTIEL+GK IKLQIWDTAGQERFRTIT++YYRGA GI++VYDVTD+ +F N+R W++ I++ A +NVNK+LVGNK+D+ +K+ V + +A AD I F ETSAK + NVE+ F ++A +IK RL Sbjct: 37 FISTIGVDFKIRTIELNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQWLQEIDRFACENVNKLLVGNKSDL-VAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRL 173 HSP 2 Score: 38.1206 bits (87), Expect = 5.941e-47 Identity = 16/25 (64.00%), Postives = 22/25 (88.00%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82 SGVGKSCLLLRF+D +++ SFI+ + Sbjct: 17 SGVGKSCLLLRFADDTYSESFISTI 41 The following BLAST results are available for this feature:
BLAST of CX296319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296319 ID=CX296319; Name=CX296319; organism=Citrus clementina; type=EST; length=718bpback to top |