CX296319
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 1.356e-39 Identity = 73/127 (57.48%), Postives = 96/127 (75.59%), Query Frame = 1 Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVF 447 F T+GIDFK++T+ KRIKLQIWDTAGQER+RTITTAYYRGAMG LL+YD+ ++ SF +++W I+ ++ DN ILVGNK D+ E +R VP G+ LAD+ G +FFE SAK N+NV++VF Sbjct: 51 FVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDL-EDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVF 176 HSP 2 Score: 28.4906 bits (62), Expect = 1.356e-39 Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSFTTSFIT 76 S VGK+ L R++D SFT +F++ Sbjct: 31 SSVGKTSFLFRYADDSFTPAFVS 53
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB1_THEPA (Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.356e-39 Identity = 74/151 (49.01%), Postives = 111/151 (73.51%), Query Frame = 1 Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRAEPQTIKIN 525 TIG+DFKI+T+++D IKLQIWDTAGQERFRTIT+ YYRGA GI+ VYDVT++ SF++I W+++I+++A+ NV K+L+GNK D+ ES R V + + +A++ + + E SAKT+ NVE+ F +IA+ +K ++ S A T+ +N Sbjct: 39 TIGVDFKIKTVKIDNTTIKLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVCKLLIGNKIDLAES-RVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPSNAPASTVSLN 188 HSP 2 Score: 30.8018 bits (68), Expect = 1.356e-39 Identity = 12/25 (48.00%), Postives = 20/25 (80.00%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSFTTSFITPL 82 SG GKS LLLRF+D +++ S+++ + Sbjct: 16 SGTGKSSLLLRFADNTYSESYMSTI 40
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.767e-39 Identity = 74/141 (52.48%), Postives = 103/141 (73.05%), Query Frame = 1 Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 489 F T+GIDFK++T+ KRIKLQIWDTAGQER+RTITTAYYRGAMG LL+YD+ ++ SF +++W I+ ++ DN ILVGNK D+ E +R VP G+ LAD+ G +FFE SAK N+NV++VF + I +++ ++ Sbjct: 51 FVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDL-EDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNES 190 HSP 2 Score: 28.4906 bits (62), Expect = 1.767e-39 Identity = 11/23 (47.83%), Postives = 17/23 (73.91%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSFTTSFIT 76 S VGK+ L R++D SFT +F++ Sbjct: 31 SSVGKTSFLFRYADDSFTPAFVS 53
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB26_HUMAN (Ras-related protein Rab-26 OS=Homo sapiens GN=RAB26 PE=1 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 2.991e-39 Identity = 72/142 (50.70%), Postives = 104/142 (73.24%), Query Frame = 1 Query: 52 FLYYQFYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQR 477 FL F T+GIDF+ + +++DG ++KLQ+WDTAGQERFR++T AYYR A +LL+YDVT+++SF+NI+ W+ I ++A +V +L+GNK D +R V G+ LA EYG+ F ETSAKT LNV+ F +IA+++KQR Sbjct: 88 FLAGTFISTVGIDFRNKVLDVDGVKVKLQMWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKVD-SAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQR 228 HSP 2 Score: 33.113 bits (74), Expect = 2.991e-39 Identity = 13/17 (76.47%), Postives = 16/17 (94.12%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSF 58 SGVGK+CLL+RF DG+F Sbjct: 72 SGVGKTCLLVRFKDGAF 88
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB2_LYMST (Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 3.001e-39 Identity = 77/151 (50.99%), Postives = 107/151 (70.86%), Query Frame = 1 Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRAEPQTIKI 522 TIG++F R I +DGK+IKLQIWDTAGQE FR+IT +YYRGA G LLVYD+T +FN++ W+ + QH++ N+ +L+GNK+D+ E++R V +G+A A E+G+ F ETSAKT NVEE F + A++I Q++ D D E IKI Sbjct: 38 TIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDL-EARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGVFDINNEANGIKI 187 HSP 2 Score: 29.261 bits (64), Expect = 3.001e-39 Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSF 58 +GVGKSCLLL+F+D F Sbjct: 15 TGVGKSCLLLQFTDKRF 31
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 8.643e-39 Identity = 76/151 (50.33%), Postives = 107/151 (70.86%), Query Frame = 1 Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD--TDSRAEPQTIKI 522 TIG++F R + +DGK+IKLQIWDTAGQE FR+IT +YYRGA G LLVYD+T +FN++ +W+ + QH+S N+ +L+GNK+D+ ES+R V +G+A A E+G+ F ETSAKT NVEE F + A++I +++ D E IKI Sbjct: 38 TIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDL-ESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEANGIKI 187 HSP 2 Score: 29.261 bits (64), Expect = 8.643e-39 Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSF 58 +GVGKSCLLL+F+D F Sbjct: 15 TGVGKSCLLLQFTDKRF 31
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB3C_HUMAN (Ras-related protein Rab-3C OS=Homo sapiens GN=RAB3C PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 9.932e-39 Identity = 75/141 (53.19%), Postives = 106/141 (75.18%), Query Frame = 1 Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 489 F T+GIDFK++T+ + KRIKLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W I+ ++ DN ILVGNK DM E +R + T +GQ L ++ G +FFETSAK N+NV++ F + I +++++ Sbjct: 59 FVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDM-EDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSES 198
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: RAB3C_BOVIN (Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C PE=2 SV=3) HSP 1 Score: 160.229 bits (404), Expect = 9.932e-39 Identity = 75/141 (53.19%), Postives = 106/141 (75.18%), Query Frame = 1 Query: 67 FYYTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADT 489 F T+GIDFK++T+ + KRIKLQIWDTAGQER+RTITTAYYRGAMG +L+YD+T+E SFN +++W I+ ++ DN ILVGNK DM E +R + T +GQ L ++ G +FFETSAK N+NV++ F + I +++++ Sbjct: 59 FVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDM-EDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSES 198
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.126e-38 Identity = 71/137 (51.82%), Postives = 101/137 (73.72%), Query Frame = 1 Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 486 TIG++F R I +DGK+IKLQIWDTAGQE FR+IT +YYRGA G LLVYD+T +FN++ +W+ + QHA+ N+ +L+GNK D+ +RAV T +G+ A E+G+ F ETSA+T NVEE F + A++I +++ D Sbjct: 38 TIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTH-RRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQD 173 HSP 2 Score: 29.261 bits (64), Expect = 1.126e-38 Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSF 58 +GVGKSCLLL+F+D F Sbjct: 15 TGVGKSCLLLQFTDKRF 31
BLAST of CX296319 vs. ExPASy Swiss-Prot
Match: YPTC4_CHLRE (GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.126e-38 Identity = 71/137 (51.82%), Postives = 101/137 (73.72%), Query Frame = 1 Query: 76 TIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLAD 486 TIG++F R I +DGK+IKLQIWDTAGQE FR+IT +YYRGA G LLVYD+T +FN++ +W+ + QHA+ N+ +L+GNK D+ +RAV T +G+ A E+G+ F ETSA+T NVEE F + A++I +++ D Sbjct: 38 TIGVEFGARMINIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTH-RRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQD 173 HSP 2 Score: 29.261 bits (64), Expect = 1.126e-38 Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = 2 Query: 8 SGVGKSCLLLRFSDGSF 58 +GVGKSCLLL+F+D F Sbjct: 15 TGVGKSCLLLQFTDKRF 31 The following BLAST results are available for this feature:
BLAST of CX296319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296319 ID=CX296319; Name=CX296319; organism=Citrus clementina; type=EST; length=718bpback to top |