CX296333
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296333 vs. ExPASy Swiss-Prot
Match: WRK16_ARATH (Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.824e-17 Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = -2 Query: 360 KRVVRVPAVSLRLSDIPPDDFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSVADTRNLILESS*TRNKKTS 653 KRVV V R SD+ + WRKYGQKPIK SP+PR YY+C+S +GC ARK VER+ DP++ V+TY EHNH RN + S+ + + K S Sbjct: 1167 KRVVCVVDRGSRSSDL----WVWRKYGQKPIKSSPYPRSYYRCASSKGCFARKQVERSRTDPNVSVITYISEHNHPFPT--LRNTLAGSTRSSSSKCS 1258
BLAST of CX296333 vs. ExPASy Swiss-Prot
Match: WRKY3_ARATH (Probable WRKY transcription factor 3 OS=Arabidopsis thaliana GN=WRKY3 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.382e-17 Identity = 44/99 (44.44%), Postives = 60/99 (60.61%), Query Frame = -2 Query: 363 RVVRVPAVSLRLS---DIPPDDFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSVADTRNLILESS*TRNKKT 650 R V P + ++ + D+ D + WRKYGQK +KG+P+PR YYKC++ C RKHVERA DP +V TYEG+HNH + A T + L + N T Sbjct: 396 RTVTEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTT-PDCGVRKHVERAATDPKAVVTTYEGKHNHDVPAARTSSHQLRPNNQHNTST 493 HSP 2 Score: 72.0182 bits (175), Expect = 3.013e-12 Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = -2 Query: 423 SDIPPDD-FSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSL 614 +D P DD ++WRKYGQK +KGS PR YYKC+ CP +K VER+LD + + Y+G+HNH L Sbjct: 245 ADKPADDGYNWRKYGQKQVKGSDFPRSYYKCTH-PACPVKKKVERSLDG-QVTEIIYKGQHNHEL 307
BLAST of CX296333 vs. ExPASy Swiss-Prot
Match: WRKY2_ARATH (Probable WRKY transcription factor 2 OS=Arabidopsis thaliana GN=WRKY2 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.306e-17 Identity = 41/82 (50.00%), Postives = 55/82 (67.07%), Query Frame = -2 Query: 414 RVVRVPAVSLRLS---DIPPDDFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSVA 650 R +R P V ++ + DI D + WRKYGQK +KG+P+PR YYKC++ GC RKHVERA D ++ TYEG+HNH + A Sbjct: 468 RAIREPRVVVQTTSDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTA-PGCTVRKHVERASHDLKSVITTYEGKHNHDVPAA 548
BLAST of CX296333 vs. ExPASy Swiss-Prot
Match: WRK32_ARATH (Probable WRKY transcription factor 32 OS=Arabidopsis thaliana GN=WRKY32 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.306e-17 Identity = 34/66 (51.52%), Postives = 49/66 (74.24%), Query Frame = -2 Query: 402 DDFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSVADTRN 599 D + WRKYGQK +KG+PHPR YY+C+S GCP RKH+E A+++ +++TY+G HNH + V R+ Sbjct: 332 DGYRWRKYGQKMVKGNPHPRNYYRCTSA-GCPVRKHIETAVENTKAVIITYKGVHNHDMPVPKKRH 396
BLAST of CX296333 vs. ExPASy Swiss-Prot
Match: WRKY9_ARATH (Probable WRKY transcription factor 9 OS=Arabidopsis thaliana GN=WRKY9 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.182e-16 Identity = 37/64 (57.81%), Postives = 44/64 (68.75%), Query Frame = -2 Query: 408 DDFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSVADT 599 D WRKYGQK KG+P PR YY+C+ GCP RK V+R L+D S+L+ TYEG HNH L V T Sbjct: 236 DGCQWRKYGQKTAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGAT 299
BLAST of CX296333 vs. ExPASy Swiss-Prot
Match: WRK58_ARATH (Probable WRKY transcription factor 58 OS=Arabidopsis thaliana GN=WRKY58 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.633e-16 Identity = 36/66 (54.55%), Postives = 46/66 (69.70%), Query Frame = -2 Query: 414 DIPPDDFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSVA 611 D+ D + WRKYGQK +KG+PHPR YYKC++ C RKHVERA D ++ TYEG+HNH + A Sbjct: 303 DLLDDGYRWRKYGQKVVKGNPHPRSYYKCTT-PNCTVRKHVERASTDAKAVITTYEGKHNHDVPAA 367 HSP 2 Score: 71.2478 bits (173), Expect = 5.140e-12 Identity = 33/62 (53.23%), Postives = 44/62 (70.97%), Query Frame = -2 Query: 429 DIPPDD-FSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNH 611 D P DD ++WRKYGQKPIKG +PR YYKC+ V CP +K VER+ D + + Y+G+H+H Sbjct: 163 DKPADDGYNWRKYGQKPIKGCEYPRSYYKCTHV-NCPVKKKVERS-SDGQITQIIYKGQHDH 222
BLAST of CX296333 vs. ExPASy Swiss-Prot
Match: WRK26_ARATH (Probable WRKY transcription factor 26 OS=Arabidopsis thaliana GN=WRKY26 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.633e-16 Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = -2 Query: 423 DIPPDDFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSL 611 DI D + WRKYGQK +KG+P+PR YYKC + GC RKHVERA DP ++ TYEG+H H + Sbjct: 231 DILDDGYRWRKYGQKVVKGNPNPRSYYKC-TFTGCFVRKHVERAFQDPKSVITTYEGKHKHQI 292
BLAST of CX296333 vs. ExPASy Swiss-Prot
Match: WRK44_ARATH (WRKY transcription factor 44 OS=Arabidopsis thaliana GN=WRKY44 PE=1 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 3.439e-16 Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = -2 Query: 423 SDIPPDDFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSL 614 SD D F WRKYGQK + G+ +PR YY+C+S C ARKHVERA DDP + TYEG+HNH L Sbjct: 345 SDSLEDGFRWRKYGQKVVGGNAYPRSYYRCTSAN-CRARKHVERASDDPRAFITTYEGKHNHHL 407 HSP 2 Score: 68.9366 bits (167), Expect = 2.551e-11 Identity = 30/58 (51.72%), Postives = 42/58 (72.41%), Query Frame = -2 Query: 426 DDFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHS 599 D ++WRKYGQK +KGS PR YYKC+ + CP +K VER+++ + + Y+GEHNHS Sbjct: 166 DGYNWRKYGQKQVKGSECPRSYYKCTHPK-CPVKKKVERSVEG-QVSEIVYQGEHNHS 221
BLAST of CX296333 vs. ExPASy Swiss-Prot
Match: WRKY6_ARATH (WRKY transcription factor 6 OS=Arabidopsis thaliana GN=WRKY6 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.492e-16 Identity = 40/80 (50.00%), Postives = 49/80 (61.25%), Query Frame = -2 Query: 414 VRVPAVSLRLSDIPP---DDFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSVA 644 +R VS+R P D WRKYGQK KG+P PR YY+C+ GCP RK V+R +D S+L+ TYEG HNH L A Sbjct: 295 MRKARVSVRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMATGCPVRKQVQRCAEDRSILITTYEGNHNHPLPPA 374
BLAST of CX296333 vs. ExPASy Swiss-Prot
Match: WRK72_ARATH (Probable WRKY transcription factor 72 OS=Arabidopsis thaliana GN=WRKY72 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.492e-16 Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = -2 Query: 408 DDFSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPSMLVVTYEGEHNHSLSVADT 599 D WRKYGQK KG+P PR YY+C+ GCP RK V+R DD S+L+ TYEG H+HSL ++ T Sbjct: 228 DGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCADDMSILITTYEGTHSHSLPLSAT 291 The following BLAST results are available for this feature:
BLAST of CX296333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296333 ID=CX296333; Name=CX296333; organism=Citrus clementina; type=EST; length=654bpback to top |