CX296373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_MOUSE (60S ribosomal protein L17 OS=Mus musculus GN=Rpl17 PE=2 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 7.862e-36 Identity = 74/107 (69.16%), Postives = 86/107 (80.37%), Query Frame = -2 Query: 228 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 548 +YL+DV KQ +PF R+ GVGR AQAK QGRWP KSA+F+L +LKNAESNAE+KGLDVD+L I HIQVN+A K RRRTYRAHGRINPYMSSPCHIE+ L+ Sbjct: 46 KYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWT-QGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILT 151
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_BOVIN (60S ribosomal protein L17 OS=Bos taurus GN=RPL17 PE=2 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 7.862e-36 Identity = 74/107 (69.16%), Postives = 86/107 (80.37%), Query Frame = -2 Query: 228 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 548 +YL+DV KQ +PF R+ GVGR AQAK QGRWP KSA+F+L +LKNAESNAE+KGLDVD+L I HIQVN+A K RRRTYRAHGRINPYMSSPCHIE+ L+ Sbjct: 46 KYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWT-QGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILT 151
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_PECGU (60S ribosomal protein L17 OS=Pectinaria gouldii GN=rpl-17 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.341e-35 Identity = 73/105 (69.52%), Postives = 84/105 (80.00%), Query Frame = -2 Query: 231 YLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 545 YL +V+ HKQ IPF R GVGR AQAKN N QGRWP KS +F+L LLKNAESNAE++GLDVD+L ++H+ V+ A K RRRTYRAHGRINPYMSSPCHIEL L Sbjct: 47 YLSNVVEHKQCIPFRRHKGGVGRCAQAKNFNTT-QGRWPKKSCEFMLQLLKNAESNAELRGLDVDSLVVAHVSVDAAAKMRRRTYRAHGRINPYMSSPCHIELCL 150
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_CAEEL (60S ribosomal protein L17 OS=Caenorhabditis elegans GN=rpl-17 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 5.096e-35 Identity = 73/106 (68.87%), Postives = 81/106 (76.42%), Query Frame = -2 Query: 228 YLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 545 +L V HK+ +PF RF G+GR AQ K N QGRWPVKSA F+LDLLKNAESNAE KGLDVD L I HI V +A K RRRTYRAHGRINPYMSSPCHIE+ L+ Sbjct: 49 FLNHVKEHKEIVPFRRFHGGIGRAAQTKQWNTT-QGRWPVKSADFLLDLLKNAESNAEYKGLDVDHLVIEHINVQRAAKLRRRTYRAHGRINPYMSSPCHIEVILA 153
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_IXOSC (60S ribosomal protein L17 OS=Ixodes scapularis GN=RpL17 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 6.655e-35 Identity = 74/107 (69.16%), Postives = 85/107 (79.44%), Query Frame = -2 Query: 228 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 548 RYL++V+A K+ +PF RF GVGR AQAK QGRWP KSA+F+ LL+NAESNA+ KGLDVD L I HIQVN+A K RRRTYRAHGRINPYMSSPCHIE+ LS Sbjct: 46 RYLKNVIAKKEIVPFRRFNGGVGRKAQAKAFGCT-QGRWPKKSAEFLWQLLRNAESNADYKGLDVDRLVIDHIQVNRAPKMRRRTYRAHGRINPYMSSPCHIEVILS 151
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_ARGMO (60S ribosomal protein L17 OS=Argas monolakensis GN=RpL17 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 8.692e-35 Identity = 73/107 (68.22%), Postives = 85/107 (79.44%), Query Frame = -2 Query: 228 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 548 RYL++V+A K+ +PF RF GVGR AQAK QGRWP KSA+F+ LL+NAESNA+ KGLDVD L I HIQVN+A K RRRTYRAHGRINPYMSSPCH+E+ LS Sbjct: 46 RYLKNVIAKKEIVPFRRFNGGVGRKAQAKAWGCT-QGRWPKKSAEFLWQLLRNAESNADYKGLDVDRLVIDHIQVNRAPKMRRRTYRAHGRINPYMSSPCHVEVILS 151
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_LONON (60S ribosomal protein L17 OS=Lonomia obliqua GN=RpL17 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 7.358e-34 Identity = 74/107 (69.16%), Postives = 82/107 (76.64%), Query Frame = -2 Query: 228 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 548 RYL++V K+ IPF RF GVGR AQAK QGRWP KSA+F L LL+NAESNA+ KGLDVD L I HIQVN+A RRRTYRAHGRINPYMSSPCHIE+ LS Sbjct: 46 RYLKNVTEKKECIPFRRFNGGVGRCAQAKQFGTT-QGRWPKKSAEFPLQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVALS 151
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_AGRLI (60S ribosomal protein L17 OS=Agriotes lineatus GN=RpL17 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 7.358e-34 Identity = 70/106 (66.04%), Postives = 83/106 (78.30%), Query Frame = -2 Query: 228 YLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 545 YL++V+ HK+ +PF RF GVGR AQAK QGRWP KSA+F+L +L+NAESNA+ GLDVD L I HIQVN+A RRRTYRAHGRINPYMSSPCHIE+ L+ Sbjct: 47 YLKNVIGHKECVPFRRFNGGVGRCAQAKQWGTT-QGRWPKKSAEFLLQMLRNAESNADYSGLDVDRLVIEHIQVNRAACLRRRTYRAHGRINPYMSSPCHIEMWLT 151
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_ANOGA (60S ribosomal protein L17 OS=Anopheles gambiae GN=RpL17 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 9.610e-34 Identity = 71/107 (66.36%), Postives = 87/107 (81.31%), Query Frame = -2 Query: 228 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 548 R+L++V+ K+ +PF RF GVGR AQAK+ + GRWP KSA+F+L LLKNAE+NA+ KGLDVD L I+HIQVN+A RRRTYRAHGRINPYMSSPCHIEL+L+ Sbjct: 46 RFLKNVIEKKECVPFRRFNGGVGRCAQAKHWGTS-VGRWPKKSAEFLLQLLKNAEANADYKGLDVDRLVINHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIELSLT 151
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_PHLPP (60S ribosomal protein L17 OS=Phlebotomus papatasi GN=RpL17 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.255e-33 Identity = 71/107 (66.36%), Postives = 84/107 (78.50%), Query Frame = -2 Query: 228 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 548 R+L++V+ K+ +PF RF GVGR AQAK QGRWP KSA+F+L LL+NAESNA+ KGLDVD L I HIQVN+A RRRTYRAHGRINPYMSSPCHIE+ L+ Sbjct: 46 RFLKNVVEKKECVPFRRFNGGVGRCAQAKQWKTT-QGRWPKKSAEFLLQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVILT 151 The following BLAST results are available for this feature:
BLAST of CX296373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296373 ID=CX296373; Name=CX296373; organism=Citrus clementina; type=EST; length=549bpback to top |