CX296373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_BIPLU (60S ribosomal protein L17 OS=Biphyllus lunatus GN=RpL17 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.639e-33 Identity = 71/106 (66.98%), Postives = 82/106 (77.36%), Query Frame = -2 Query: 228 YLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 545 YL++V A K+ +PF RF GVGR AQAK QGRWP KSA+F+L LL+NAESNA+ GLDVD L + HIQVN+A RRRTYRAHGRINPYMSSPCHIEL L+ Sbjct: 47 YLKNVTAQKECVPFRRFNGGVGRCAQAKQFGTT-QGRWPKKSAEFLLQLLRNAESNADYSGLDVDRLVVQHIQVNRAACLRRRTYRAHGRINPYMSSPCHIELWLT 151
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_MACHI (60S ribosomal protein L17 OS=Maconellicoccus hirsutus GN=RpL17 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.141e-33 Identity = 69/107 (64.49%), Postives = 85/107 (79.44%), Query Frame = -2 Query: 228 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 548 ++L++V ++ +PF RF GVGR AQAK QGRWP+KSA+F+L+LL+NAESNAE KGLD D L+I HIQVN+A RRRTYRAHGRINPYMSSPCHIE+ L+ Sbjct: 46 QFLKNVQDKQECVPFRRFNGGVGRCAQAKQWGTT-QGRWPIKSAQFLLELLRNAESNAEFKGLDSDRLFIEHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVILT 151
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_BOMMO (60S ribosomal protein L17 OS=Bombyx mori GN=RpL17 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.141e-33 Identity = 73/107 (68.22%), Postives = 83/107 (77.57%), Query Frame = -2 Query: 228 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 548 RYL++V+ K+ IPF RF GVGR AQAK QGRWP KSA+F+L LL+NAESNA+ K LDVD L I HIQVN+A RRRTYRAHGRINPYMSSPCHIE+ LS Sbjct: 46 RYLKNVIEKKECIPFRRFNGGVGRCAQAKQFGTT-QGRWPKKSAEFLLQLLRNAESNADNKTLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVCLS 151
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_DROYA (60S ribosomal protein L17 OS=Drosophila yakuba GN=RpL17 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.796e-33 Identity = 69/107 (64.49%), Postives = 83/107 (77.57%), Query Frame = -2 Query: 228 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 548 RYL+ V+ K+ +PF RF GVGR AQAK QGRWP KSA+F+L LL+NAE+NA+ KGLD D L + HIQVN+AQ RRRTYRAHGRINPYMSSPCH+E+ L+ Sbjct: 46 RYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTT-QGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLRRRTYRAHGRINPYMSSPCHVEVILT 151
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_DROME (60S ribosomal protein L17 OS=Drosophila melanogaster GN=RpL17 PE=1 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.796e-33 Identity = 69/107 (64.49%), Postives = 83/107 (77.57%), Query Frame = -2 Query: 228 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 548 RYL+ V+ K+ +PF RF GVGR AQAK QGRWP KSA+F+L LL+NAE+NA+ KGLD D L + HIQVN+AQ RRRTYRAHGRINPYMSSPCH+E+ L+ Sbjct: 46 RYLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTT-QGRWPKKSAEFLLQLLRNAEANADCKGLDADRLVVHHIQVNRAQCLRRRTYRAHGRINPYMSSPCHVEVILT 151
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_AEDAL (60S ribosomal protein L17 OS=Aedes albopictus GN=RpL17 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.796e-33 Identity = 69/107 (64.49%), Postives = 86/107 (80.37%), Query Frame = -2 Query: 228 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 548 ++L++V K+ +PF RF GVGR AQAK+ N + GRWP KSA+F+L LLKNAE+NA+ +GLDVD L + HIQVN+A RRRTYRAHGRINPYMSSPCHIEL+L+ Sbjct: 46 KFLKNVCEKKECVPFRRFNGGVGRCAQAKHWNTS-VGRWPKKSAEFLLQLLKNAEANADYRGLDVDRLVVDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIELSLT 151
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_AEDAE (60S ribosomal protein L17 OS=Aedes aegypti GN=RpL17 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.796e-33 Identity = 69/107 (64.49%), Postives = 86/107 (80.37%), Query Frame = -2 Query: 228 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 548 ++L++V K+ +PF RF GVGR AQAK+ N + GRWP KSA+F+L LLKNAE+NA+ +GLDVD L + HIQVN+A RRRTYRAHGRINPYMSSPCHIEL+L+ Sbjct: 46 KFLKNVCEKKECVPFRRFNGGVGRCAQAKHWNTS-VGRWPKKSAEFLLQLLKNAEANADYRGLDVDRLVVDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIELSLT 151
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17A_SCHPO (60S ribosomal protein L17-A OS=Schizosaccharomyces pombe GN=rpl17a PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 8.136e-33 Identity = 68/106 (64.15%), Postives = 80/106 (75.47%), Query Frame = -2 Query: 228 YLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 545 +L++V HKQA+PF RF GVGRTAQ K Q RWPVKS KF DLLKNAE+NAE KGLD+D L I H+QVN A KQRRRTYRAHGR+ Y+SSP HIE+ ++ Sbjct: 47 FLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVT-QARWPVKSVKFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVA 151
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_NEUCR (60S ribosomal protein L17 OS=Neurospora crassa GN=rpl-17 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.388e-32 Identity = 66/107 (61.68%), Postives = 82/107 (76.64%), Query Frame = -2 Query: 228 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 548 ++LE+V+ K+A+P R+ G GR AQ K + + RWP KSA+F+L LLKNAE+NA+ KGLD L + HIQVNQA KQRRRTYRAHGRINPYMS+PCHIEL L+ Sbjct: 46 KFLENVLEKKEAVPMRRYAGGTGRAAQGKQFGVS-RARWPAKSAEFLLGLLKNAEANADAKGLDTGNLVVKHIQVNQAPKQRRRTYRAHGRINPYMSNPCHIELILT 151
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL17_DROPS (60S ribosomal protein L17 OS=Drosophila pseudoobscura pseudoobscura GN=RpL17 PE=3 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 1.388e-32 Identity = 67/107 (62.62%), Postives = 83/107 (77.57%), Query Frame = -2 Query: 228 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 548 R+L+ V+ K+ +PF RF GVGR AQAK QGRWP KSA+F+L LL+NAE+NA+ KGLD D + + HIQVN+AQ RRRTYRAHGRINPYMSSPCH+E+ L+ Sbjct: 46 RFLKAVIDQKECVPFRRFNGGVGRCAQAKQWKTT-QGRWPKKSAEFLLQLLRNAEANADCKGLDADRMVVHHIQVNRAQCLRRRTYRAHGRINPYMSSPCHVEVILT 151 The following BLAST results are available for this feature:
BLAST of CX296373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296373 ID=CX296373; Name=CX296373; organism=Citrus clementina; type=EST; length=549bpback to top |