CX296373
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL22_METMJ (50S ribosomal protein L22P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl22p PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.764e-11 Identity = 43/106 (40.57%), Postives = 59/106 (55.66%), Query Frame = -2 Query: 228 YLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 545 YL DV+A K+AIPF RF R V A + + GR+PVK+A+ + LL++ E NAE GLDV+ L I H N + R RA GR P +IE+ ++ Sbjct: 48 YLTDVVALKKAIPFKRFNRNV---AHKRGLSKWPAGRYPVKAAEAYIRLLESVEKNAEYIGLDVENLRIDHAAANTGRGLRAFFPRAMGRATPKRRETVNIEIVVT 150
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL22_PYRAB (50S ribosomal protein L22P OS=Pyrococcus abyssi GN=rpl22p PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.303e-11 Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = -2 Query: 231 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 548 RYL+DV+A ++ +P R+ G K G GR+PVK AK I +L NA++NA+ KGLD D L I HI ++ R RA GR P+ HIE+ + Sbjct: 49 RYLDDVIALRRPVPLKRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNAQNNAKQKGLDPDKLRIIHIAAHRGPVLRGWYPRAFGRPTPFNEQTTHIEVVV 150
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL22_PYRFU (50S ribosomal protein L22P OS=Pyrococcus furiosus GN=rpl22p PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.131e-11 Identity = 42/106 (39.62%), Postives = 56/106 (52.83%), Query Frame = -2 Query: 231 RYLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 548 RYL+DV+A K+ +P R+ G K G GR+PVK AK I +L N ++NA KGLD D L I HI ++ R RA GR P+ HIE+ + Sbjct: 49 RYLDDVIALKRPVPLKRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNVKNNAVQKGLDPDKLKIIHIAAHKGPVLRGWYPRAFGRATPFNEQTTHIEVVV 150
BLAST of CX296373 vs. ExPASy Swiss-Prot
Match: RL22_HALMA (50S ribosomal protein L22P OS=Haloarcula marismortui GN=rpl22p PE=1 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 8.753e-11 Identity = 38/105 (36.19%), Postives = 60/105 (57.14%), Query Frame = -2 Query: 231 YLEDVMAHKQAIPFTRFCRGVGRTAQAKNRNPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 545 YLE V+ Q +PF + GVG ++ + GR+P K++K LDLL+NA NA+ +G D +A+ I H+ ++ +Q+ R RA GR + + S +EL L Sbjct: 47 YLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDA---GRYPEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVGEQQGRKPRAMGRASAWNSPQVDVELIL 148 The following BLAST results are available for this feature:
BLAST of CX296373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296373 ID=CX296373; Name=CX296373; organism=Citrus clementina; type=EST; length=549bpback to top |