CX296375

Overview
NameCX296375
Unique NameCX296375
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length412
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig695 contig Ccv1_Contig695:496..907. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.314e-31
Identity = 66/142 (46.48%), Postives = 89/142 (62.68%), Query Frame = 1
Query:    7 EYDPCSDKYVNSYLNLAEVQAALHAKH----TNWTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            +YDPC++K+   Y NL EVQ ALH       + W TC D+    W DSPS+VL    +LIA+G+R+W++SGD D  VPVTS+RYSI+ALNL   +A+ PWY D              F TVRGAGH VP ++P++AL +  +
Sbjct:  313 QYDPCTEKHTTVYFNLPEVQKALHVPPGLAPSKWDTCSDVVSEHWNDSPSSVLNIYHELIAAGLRIWVFSGDADAVVPVTSTRYSIDALNLRPLSAYGPWYLDGQVGGWSQQYAGLNFVTVRGAGHEVPLHRPKQALALFKA 454          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 2.242e-31
Identity = 65/141 (46.10%), Postives = 84/141 (59.57%), Query Frame = 1
Query:   10 YDPCSDKYVNSYLNLAEVQAALHAKH----TNWTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            YDPC D Y   + N A+VQ +LHA       NW+ C       WT S  +VLP  ++LIA G+R+W+YSGDTDGRVPV ++RYS+NAL LP++TAW PWY +              F T RGAGH VP  +P  +L   S+
Sbjct:  314 YDPCLDDYARVFYNRADVQKSLHASDGVNLKNWSICNMEIFNNWTGSNPSVLPIYEKLIAGGLRIWVYSGDTDGRVPVLATRYSLNALELPIKTAWRPWYHEKQVSGWLQEYEGLTFATFRGAGHAVPCFKPSSSLAFFSA 454          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 3.824e-31
Identity = 65/140 (46.43%), Postives = 87/140 (62.14%), Query Frame = 1
Query:   10 YDPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGDL--RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWY-TDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMIS 408
            YDPC++ Y  +Y N  +VQ ALHA  TN    ++ C  +  RW+D+PST++P IQ+L+  G+R+WIYSGDTDGRVPVTS+RYSI  + L VE+ W  W+                 F TVRGAGH VP   P ++L + S
Sbjct:  328 YDPCTESYAENYFNRKDVQVALHANVTNLPYPYSPCSGVIKRWSDAPSTMIPIIQKLLTGGLRIWIYSGDTDGRVPVTSTRYSIKKMGLKVESPWRSWFHKSQVAGWVETYAGGLNFVTVRGAGHQVPALAPAQSLTLFS 467          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 6.523e-31
Identity = 63/140 (45.00%), Postives = 88/140 (62.86%), Query Frame = 1
Query:   10 YDPCSDKYVNSYLNLAEVQAALHAKHTN-----WTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTD-XXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIM 402
            YDPC+++Y  +Y N  +VQ ALHA  T      WT C D     W D+P ++LP  ++LIA+G+R+W++SGDTD  VP+T++RYSI AL L   T+WYPWY D                 +VRGAGH VP ++P++ALI+
Sbjct:  317 YDPCTERYSTAYYNRRDVQTALHANVTGAMNYTWTNCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLATTTSWYPWYDDLQEVGGWSQVYKGLTLVSVRGAGHEVPLHRPRQALIL 456          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.113e-30
Identity = 61/143 (42.66%), Postives = 86/143 (60.14%), Query Frame = 1
Query:    4 REYDPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            R YDPC+++Y N Y N  +VQ ALHA  T     W  C D+    W DSP ++LP  ++LI +G+++W++SGDTD  VP+T++RYS++AL L   T WYPWY                  TV GAGH VP ++P++A I+  S
Sbjct:  307 RAYDPCTERYSNVYFNRLDVQKALHANVTRLSYPWKACSDIVGSYWDDSPLSMLPIYKELITAGLKIWVFSGDTDAVVPITATRYSVDALKLATITNWYPWYDHGKVGGWSQVYKGLTLVTVAGAGHEVPLHRPRQAFILFRS 449          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP26_ARATH (Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.113e-30
Identity = 62/143 (43.36%), Postives = 84/143 (58.74%), Query Frame = 1
Query:    4 REYDPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            R YDPC++KY   Y N  EVQ A+HA  T     W  C D+   +W DSP ++LP  ++LIA+G+R+W++SGDTD  VP+T +RYSI AL L   + WYPW  D                T+ GAGH VP  +P+RA ++  S
Sbjct:  301 RAYDPCTEKYSGMYFNSPEVQKAMHANITGLAYPWKGCSDIVGEKWADSPLSMLPIYKELIAAGLRIWVFSGDTDSVVPITGTRYSIRALKLQPLSKWYPWNDDGQVGGWSQVYKGLTLVTIHGAGHEVPLFRPRRAFLLFQS 443          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 1.230e-29
Identity = 62/138 (44.93%), Postives = 81/138 (58.70%), Query Frame = 1
Query:    1 IREYDPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRA 393
            I  YDPC+++Y   Y N  +VQ ALHA  T     WT C ++    W D+ STVLP  +++IA GIRVW++SGD D  VPVT++RYS+  L+L  +  WYPWY                F TVRGAGH VP  +P+ A
Sbjct:  320 ISGYDPCTERYAEIYYNRPDVQKALHANTTKIPYKWTACSEVLNRNWNDTDSTVLPIYREMIAGGIRVWVFSGDVDSVVPVTATRYSLARLSLSTKLPWYPWYVKKQVGGWTEVYEGLTFVTVRGAGHEVPLFKPRAA 457          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.776e-28
Identity = 63/143 (44.06%), Postives = 85/143 (59.44%), Query Frame = 1
Query:    7 EYDPCSDKYVNSYLNLAEVQAALHAK----HTNWTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWY-TDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            +YDPC++K+   Y NL EVQ ALH       + W TC ++    W D   +VL    +LI  G+R+W++SGDTD  +PVTS+RYSI+AL LP  T W+ WY  D              F TVRGAGH VP ++P++AL +I S
Sbjct:  277 QYDPCTEKHSIVYFNLHEVQKALHVNPVIGKSKWETCSEVINTNWKDCERSVLHIYHELIQYGLRIWMFSGDTDAVIPVTSTRYSIDALKLPTVTPWHAWYDDDGEVGGWTQGYKGLNFVTVRGAGHEVPLHRPKQALTLIKS 419          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: HNLS_SORBI (P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicolor PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 2.171e-26
Identity = 59/142 (41.55%), Postives = 85/142 (59.86%), Query Frame = 1
Query:   10 YDPCSDKYVNSYLNLAEVQAALHAKHTN-----WTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWY---TDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIM 402
            YDPC+     +YLNL EVQ ALHA  +      WT C +    +W  +   +LP  ++LI +G+RVW+YSGDTD  VPV+S+R S+ AL LPV+T+WYPWY   T+              + +  GAGH+VP ++P +A ++
Sbjct:  341 YDPCAVFNSINYLNLPEVQTALHANVSGIVEYPWTVCSNTIFDQWGQAADDLLPVYRELIQAGLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEGLTYVSPSGAGHLVPVHRPAQAFLL 482          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP33_ARATH (Serine carboxypeptidase-like 33 OS=Arabidopsis thaliana GN=SCPL33 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.095e-25
Identity = 56/141 (39.72%), Postives = 78/141 (55.32%), Query Frame = 1
Query:   10 YDPCSDKYVNSYLNLAEVQAALHAKHTN---WTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWY-TDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            YDPC   Y   Y N  +V+ +LHA   N   W  C D     +  + S++LPT  +LI +G+++W+YSGD DGRVPV  SRY + AL + V++ W  W+                 F TVRGAGH+VP N+P+ AL +  S
Sbjct:  321 YDPCYSNYAEEYFNRVDVRLSLHATTRNVARWKVCNDSILQTYHFTVSSMLPTYSKLIKAGLKIWVYSGDADGRVPVIGSRYCVEALGISVKSEWRSWFHNHQVGGRITEYEGGLTFVTVRGAGHLVPLNKPEEALALFRS 461          
The following BLAST results are available for this feature:
BLAST of CX296375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
SCP29_ARATH1.314e-3146.48Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
SCP31_ARATH2.242e-3146.10Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]
SCP35_ARATH3.824e-3146.43Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
CBP2_HORVU6.523e-3145.00Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]
SCP27_ARATH1.113e-3042.66Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
SCP26_ARATH1.113e-3043.36Serine carboxypeptidase-like 26 OS=Arabidopsis tha... [more]
SCP25_ARATH1.230e-2944.93Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
CBP22_HORVU1.776e-2844.06Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
HNLS_SORBI2.171e-2641.55P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicol... [more]
SCP33_ARATH4.095e-2539.72Serine carboxypeptidase-like 33 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC05139G09SK FerrChloL1 Citrus clementina cDNA clone C05139G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296375 ID=CX296375; Name=CX296375; organism=Citrus clementina; type=EST; length=412bp
ATCAGAGAATATGACCCCTGCTCCGACAAGTACGTTAATTCCTATTTAAA
CCTTGCCGAGGTGCAAGCAGCTCTTCATGCGAAACATACCAACTGGACAA
CTTGCGGCGACTTGAGATGGACCGACAGCCCATCAACTGTGCTTCCAACA
ATACAGCAGCTGATAGCAAGTGGAATTAGGGTGTGGATATACAGCGGTGA
CACAGATGGGCGAGTCCCAGTGACATCCTCTAGATACTCCATCAATGCTC
TGAACCTTCCGGTTGAAACTGCTTGGTACCCATGGTACACTGATGGTGAG
GTTGGTGGATATGTGCTCGGGTACAAGGGAGTGGTATTCACTACTGTTAG
AGGGGCAGGGCATATGGTTCCTACTAACCAGCCACAGCGAGCTCTCATCA
TGATCTCATCTT
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