CX296375

Overview
NameCX296375
Unique NameCX296375
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length412
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig695 contig Ccv1_Contig695:496..907. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP28_ARATH (Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 3.245e-22
Identity = 53/144 (36.81%), Postives = 77/144 (53.47%), Query Frame = 1
Query:    4 REYDPCSDKYVNSYLNLAEVQAALHAK---HTNWTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTD---XXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMIS 408
            R  D C   Y   Y+N   V  + HA+    T WT C  +    W DSP ++LP I+ L+ + +R+WI+SGD+D  +P++ +R+SINA+ L     WYPWY                   +TTVR AGH VP +QP+ AL + +
Sbjct:  306 RGNDECVVGYTRKYMNDPNVHKSFHARLNGSTPWTPCSRVIRKNWKDSPKSMLPIIKNLLQAHLRIWIFSGDSDAVLPLSGTRHSINAMKLKSSKRWYPWYHSHGLVGGWSQVYEDGLLTYTTVRAAGHEVPLSQPRLALFLFT 449          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP36_ARATH (Serine carboxypeptidase-like 36 OS=Arabidopsis thaliana GN=SCPL36 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.229e-22
Identity = 57/147 (38.78%), Postives = 80/147 (54.42%), Query Frame = 1
Query:    1 IREYDPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGD-LRWT----DSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYT-DXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            I + DPCS  Y+ +YLN+ EVQ A+HA  T     WT+C   L W     D   ++ P +Q+L+  G+RV +Y+GD D  +P TS+   +  +NL V   W PW+T                F TV+GAGH VPT+QP  AL + +S
Sbjct:  325 IMKADPCSGNYLKAYLNIKEVQEAIHANTTKIPYEWTSCNTKLLWEWNEKDRYVSLTPILQELMGKGVRVMLYNGDVDLVIPFTSTLAVVKTMNLTVVKEWRPWFTGGHVGGFTEDYKGNLTFVTVKGAGHSVPTDQPIHALNIFTS 471          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP37_ARATH (Serine carboxypeptidase-like 37 OS=Arabidopsis thaliana GN=SCPL37 PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 6.766e-20
Identity = 53/147 (36.05%), Postives = 79/147 (53.74%), Query Frame = 1
Query:    1 IREYDPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGDL---RWT--DSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYT-DXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            + E DPCS  Y+ +YLN  +VQ A+HA  T     WT+C +     W+  D  + ++P + +L+  G+RV IY+GD D  +P  S+   +  +NL V   + PW+T                F TV+GAGH VPT+QP  AL + +S
Sbjct:  330 VLEVDPCSKDYLKAYLNRKKVQKAIHANTTKLPYEWTSCNNELTENWSENDRDTPMIPILHELMGEGVRVMIYNGDVDLEIPFASTLAVVKEMNLTVVKEFRPWFTGGQLGGFTEDYKGNLTFVTVKGAGHSVPTDQPIHALNIFTS 476          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP38_ARATH (Serine carboxypeptidase-like 38 OS=Arabidopsis thaliana GN=SCPL38 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.836e-20
Identity = 51/147 (34.69%), Postives = 74/147 (50.34%), Query Frame = 1
Query:    1 IREYDPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGDLR---WTDSP--STVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYT-DXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            I E DPC   YV +YLN   VQ A+HA  T     W  C       W D+   ++++P +  L+  G+RV +YSGD D  +P T++   +  +NL V   W PW+T                + TV+G+GH VP +QP  AL + +S
Sbjct:  330 IMEVDPCRSNYVKAYLNSENVQEAMHANTTKLPYEWKACNHYLNSVWIDADKDASMVPILHDLMGEGVRVLVYSGDVDAAIPFTATMAVLKTMNLTVVNEWRPWFTGGQLGGFTEDYERNLTYATVKGSGHSVPLDQPVHALNLFTS 476          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.849e-18
Identity = 47/144 (32.64%), Postives = 81/144 (56.25%), Query Frame = 1
Query:    1 IREYDPCSDKYVNSYLNLAEVQAALHAK---HTNWTTCGD---LRW--TDSPSTVLPTIQQLIASG-IRVWIYSGDTDGRVPVTSSRYSINALNLPVETAWYPWYTD-XXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIM 402
            + +Y+PC  +Y+ +YLN  +VQ ++H     HT W  C +     W  TD  +++LP +++L+    +RVW+Y+GDTD  +P+T + +++  +NL   T W PW+++               + TV GAGH VP  +P+ AL +
Sbjct:  345 VLQYEPCGMQYIAAYLNREDVQRSMHVTKLPHT-WMLCNEATGFNWNQTDYSASMLPILKELMKHDQLRVWVYTGDTDTVIPLTVTMHALKMMNLTAVTDWLPWFSEGQVGGFTEEYKGNFRYATVIGAGHEVPLYKPKAALTL 487          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP44_ARATH (Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana GN=SCPL44 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.475e-16
Identity = 50/145 (34.48%), Postives = 72/145 (49.66%), Query Frame = 1
Query:   13 DPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSI----NALNLPVETAWYPWY-TDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            D C       YLNL EVQ ALHA  T     W+ C  L   ++TD  + +LP +++++ S + VW++SGD D  +P+  SR  +    + LN      +  W+                 F TVRGA HMVP +QP RAL + +S
Sbjct:  318 DVCMSFEEQLYLNLPEVQKALHANRTKLPYEWSMCSSLLNYKYTDGNANMLPILKRIVKSKVPVWVFSGDEDSVIPLLGSRTLVKELADDLNFNTTVPYGAWFDKGQVGGWVVEYGNLLTFATVRGAAHMVPYSQPSRALHLFTS 462          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP42_ARATH (Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana GN=SCPL42 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.108e-13
Identity = 51/145 (35.17%), Postives = 67/145 (46.21%), Query Frame = 1
Query:   13 DPCSDKYVNSYLNLAEVQAALHAKHTN----WTTC-GDLRWTDSPSTV--LPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSINAL----NLPVETAWYPWY-TDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            D C       Y NL EVQ ALHA  T+    W+ C G L ++D    +  LP ++++I +   +WI+SGD D  VP   SR  +  L    N      +  W+                 F TVRGA HMVP  QP RAL + SS
Sbjct:  312 DVCMTYERRFYFNLPEVQKALHANRTHLPYSWSMCSGVLNYSDIDGNIDMLPILKRIILNKTPIWIFSGDQDSVVPFGGSRTLVRELAQDLNFKTTVPYGAWFHKSQVGGWAIEYGKLLTFATVRGAAHMVPYAQPSRALHLFSS 456          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP46_ARATH (Serine carboxypeptidase-like 46 OS=Arabidopsis thaliana GN=SCPL46 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.753e-13
Identity = 47/144 (32.64%), Postives = 68/144 (47.22%), Query Frame = 1
Query:   13 DPCSDKYVNSYLNLAEVQAALHAKHTN---WTTCGDLRWTDSPSTVLPTIQ---QLIASGIRVWIYSGDTDGRVPVTSSRYSINAL----NLPVETAWYPWYT-DXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            D C +    +YLN  +VQ ALHA+      WT C D+   +     +PTI     L+ +G+ V++YSGD D  +P+T SR  +  L     L     +  W+                 F TVRGA H VP +QP RAL++  +
Sbjct:  311 DVCLEDETVNYLNRRDVQKALHARLVGTRKWTVCSDVLDYEVLDVEVPTINIVGSLVKAGVPVFVYSGDQDSVIPLTGSRTLVKRLAEELGLRTTVPYRVWFAGQQVGGWTQVYGNTLAFATVRGAAHEVPFSQPARALVLFKA 454          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP45_ARATH (Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.331e-12
Identity = 45/144 (31.25%), Postives = 68/144 (47.22%), Query Frame = 1
Query:   13 DPCSDKYVNSYLNLAEVQAALHAKHTN---WTTCGDLRWTDSPSTVLPTIQ---QLIASGIRVWIYSGDTDGRVPVTSSRYSINAL----NLPVETAWYPWYT-DXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            D C +    +YLN  +VQ ALHA+      WT C ++         +PTI     L+ +G+ V +YSGD D  +P+T SR  ++ L     L     +  W+                 F TVRGA H VP +QP+R+L++  +
Sbjct:  307 DVCVEDETVNYLNRRDVQEALHARLIGVREWTVCSNVLDYQLLDVEIPTINIVGSLVKAGVPVLVYSGDQDSVIPLTGSRTLVSRLAKQLGLRTSVPYRVWFAGQQVGGWTQVYGNVLSFATVRGASHEVPFSQPERSLVLFKA 450          
BLAST of CX296375 vs. ExPASy Swiss-Prot
Match: SCP41_ARATH (Serine carboxypeptidase-like 41 OS=Arabidopsis thaliana GN=SCPL41 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.331e-12
Identity = 50/145 (34.48%), Postives = 68/145 (46.90%), Query Frame = 1
Query:   13 DPCSDKYVNSYLNLAEVQAALHAKHTN----WTTCGDL---RWTDSPSTVLPTIQQLIASGIRVWIYSGDTDGRVPVTSSRYSI----NALNLPVETAWYPWY-TDXXXXXXXXXXXXXXFTTVRGAGHMVPTNQPQRALIMISS 411
            D C +     YLN+ EVQ ALHA  TN    W+ C +L      D  + +LPT++++I + I V I+SGD D  VP   +R  +    N LN      +  W+                 F TVRGA H V   QP RAL + S+
Sbjct:  308 DVCMNYERQFYLNIPEVQMALHANRTNLPYSWSLCSNLLNYSAIDVNTNMLPTLKRIIQNKIPVRIFSGDQDSVVPFLGTRTIVGELANDLNFKTTVPYGVWFHKRQVGGWAIEYGNLLTFATVRGAAHAVAYTQPSRALHLFST 452          
The following BLAST results are available for this feature:
BLAST of CX296375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
SCP28_ARATH3.245e-2236.81Serine carboxypeptidase-like 28 OS=Arabidopsis tha... [more]
SCP36_ARATH7.229e-2238.78Serine carboxypeptidase-like 36 OS=Arabidopsis tha... [more]
SCP37_ARATH6.766e-2036.05Serine carboxypeptidase-like 37 OS=Arabidopsis tha... [more]
SCP38_ARATH8.836e-2034.69Serine carboxypeptidase-like 38 OS=Arabidopsis tha... [more]
SCP39_ARATH4.849e-1832.64Serine carboxypeptidase-like 39 OS=Arabidopsis tha... [more]
SCP44_ARATH3.475e-1634.48Serine carboxypeptidase-like 44 OS=Arabidopsis tha... [more]
SCP42_ARATH2.108e-1335.17Serine carboxypeptidase-like 42 OS=Arabidopsis tha... [more]
SCP46_ARATH2.753e-1332.64Serine carboxypeptidase-like 46 OS=Arabidopsis tha... [more]
SCP45_ARATH2.331e-1231.25Serine carboxypeptidase-like 45 OS=Arabidopsis tha... [more]
SCP41_ARATH2.331e-1234.48Serine carboxypeptidase-like 41 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionC05139G09SK FerrChloL1 Citrus clementina cDNA clone C05139G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296375 ID=CX296375; Name=CX296375; organism=Citrus clementina; type=EST; length=412bp
ATCAGAGAATATGACCCCTGCTCCGACAAGTACGTTAATTCCTATTTAAA
CCTTGCCGAGGTGCAAGCAGCTCTTCATGCGAAACATACCAACTGGACAA
CTTGCGGCGACTTGAGATGGACCGACAGCCCATCAACTGTGCTTCCAACA
ATACAGCAGCTGATAGCAAGTGGAATTAGGGTGTGGATATACAGCGGTGA
CACAGATGGGCGAGTCCCAGTGACATCCTCTAGATACTCCATCAATGCTC
TGAACCTTCCGGTTGAAACTGCTTGGTACCCATGGTACACTGATGGTGAG
GTTGGTGGATATGTGCTCGGGTACAAGGGAGTGGTATTCACTACTGTTAG
AGGGGCAGGGCATATGGTTCCTACTAACCAGCCACAGCGAGCTCTCATCA
TGATCTCATCTT
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