CX296383

Overview
NameCX296383
Unique NameCX296383
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296383 vs. ExPASy Swiss-Prot
Match: ALDCA_DANRE (Fructose-bisphosphate aldolase C-A OS=Danio rerio GN=aldoca PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.805e-34
Identity = 78/150 (52.00%), Postives = 103/150 (68.67%), Query Frame = -2
Query:  240 ARFAKWRTVVSIPNG-PSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQGQL 686
            A FAKWR V+ I    PS L + E A  LARYA+I Q +G+VPIVEPEIL DGDH + R   V ++V A V+  + +++V  EG LLKP+MVTPG  C  K + ++VA  T+  L R +PPAV G+ FLSGGQSE EA++NL+A+N  +L
Sbjct:  143 ADFAKWRCVMKISETTPSNLCITENAKVLARYASICQQHGIVPIVEPEILPDGDHNLKRCQFVTERVLAAVYKAMFDHHVYLEGTLLKPNMVTPGHGCPTKYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRL 292          
BLAST of CX296383 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 4.411e-33
Identity = 70/147 (47.62%), Postives = 101/147 (68.71%), Query Frame = -2
Query:  249 ARFAKWRTVVSIPNG-PSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ 686
            ARFAKWR V++I    PS   ++  A  LARYAA+ Q+ GLVP+VEPE+++DGDH I+  +EV +     +F  L E NV+ EG +LK SMV  G  C+E+A+ ++VAE T+  L   +P  +PGI+FLSGGQ++ ++T +LN M+Q
Sbjct:  132 ARFAKWRAVINIGEDIPSGTCIEANAHALARYAALCQEQGLVPMVEPEVIMDGDHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKGCEEQASVEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQ 278          
BLAST of CX296383 vs. ExPASy Swiss-Prot
Match: ALF_DROME (Fructose-bisphosphate aldolase OS=Drosophila melanogaster GN=Ald PE=1 SV=5)

HSP 1 Score: 138.658 bits (348), Expect = 2.859e-32
Identity = 76/144 (52.78%), Postives = 101/144 (70.14%), Query Frame = -2
Query:  252 FAKWRTVVSI-PNGPSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN 680
            FAKWR V+ I  N PS  ++ E A  LARYA+I Q   +VPIVEPE+L DGDH +DR  +V + V A V+  L++++V  EG LLKP+MVT G   K K TP+++A  T++ L R +P AV G+ FLSGGQSE EAT+NL+A+N
Sbjct:  145 FAKWRCVLKIGKNTPSYQSILENANVLARYASICQSQRIVPIVEPEVLPDGDHDLDRAQKVTETVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSAK-KNTPEEIALATVQALRRTVPAAVTGVTFLSGGQSEEEATVNLSAIN 287          
BLAST of CX296383 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.734e-32
Identity = 68/147 (46.26%), Postives = 100/147 (68.03%), Query Frame = -2
Query:  249 ARFAKWRTVVSIPNG-PSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ 686
            ARFAKWR V++I    PS   ++  +  LARYAA+ Q+ GLVP+VEPE+++DG H I+  +EV +     +F  L E NV+ EG +LK SMV  G  C+E+A+ ++VAE T+  L   +P  +PGI+FLSGGQ++ ++T +LN M+Q
Sbjct:  132 ARFAKWRAVINIGEDIPSGTCIEANSHALARYAALCQEQGLVPMVEPEVIMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQ 278          
BLAST of CX296383 vs. ExPASy Swiss-Prot
Match: ALF1_CAEEL (Fructose-bisphosphate aldolase 1 OS=Caenorhabditis elegans GN=aldo-1 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.392e-31
Identity = 78/149 (52.35%), Postives = 101/149 (67.79%), Query Frame = -2
Query:  249 ARFAKWRTVVSIPNG-PSALAVKEAAWGL-ARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAE-CKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ 686
            A+FAKWR V  I +  PS  A+KE A  L +RYA+I Q NGLVPIVEPEIL DG+H + R  ++ + V + V+  L E++V  EG LLKP+MVT G     EK +   +   T+  L R +P AVPG++FLSGGQSE +ATLNLNA+NQ
Sbjct:  143 AQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQQNGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALNEHHVFLEGTLLKPNMVTSGQSFTGEKPSNADIGLATVTALQRGVPSAVPGVVFLSGGQSEEDATLNLNAINQ 291          
BLAST of CX296383 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.723e-27
Identity = 66/146 (45.21%), Postives = 92/146 (63.01%), Query Frame = -2
Query:  252 ARFAKWRTVVSIPNG-PSALAVKEAAWGLARYAAIAQDNGLVPIVEPEILLDGDHGIDRTFEVAKKVWAEVFFYLAENNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN 686
            A FAKWR++    +G PS   + E    LA+YA I Q NGLVPIVEPE+ L+GD+ + R++EV +++ + +  YL    V   G+L+K S VT G    EK TP++VA +TL+ L   IP  +PGI+FLSGG    +A   LNA+N
Sbjct:  134 ATFAKWRSLFYFYDGIPSEDCINENCSILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYTPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAIN 279          
BLAST of CX296383 vs. ExPASy Swiss-Prot
Match: ALF_LYMST (Fructose-bisphosphate aldolase (Fragment) OS=Lymnaea stagnalis PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16
Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = -2
Query:  249 NNVMFEGILLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQ 458
            +N+  EG LLKP+MVT G  C +K TP+ +A  T+  L+R +P AV GI FLSGGQSE +AT+NLNA+NQ
Sbjct:    1 HNMFLEGTLLKPNMVTAGQGCPKKYTPEDIARATVTALNRTVPAAVAGITFLSGGQSEEDATINLNAINQ 70          
BLAST of CX296383 vs. ExPASy Swiss-Prot
Match: ALDOC_CHICK (Fructose-bisphosphate aldolase C (Fragment) OS=Gallus gallus GN=ALDOC PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15
Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = -2
Query:  252 LLKPSMVTPGAECKEKATPQQVAEYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMN 434
            LLKP+MVTPG  C  K +P+++A  T+  L R +PPAVPG+ FLSGGQSE EA++NLNA+N
Sbjct:    1 LLKPNMVTPGHSCPTKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAIN 61          
The following BLAST results are available for this feature:
BLAST of CX296383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDCA_DANRE6.805e-3452.00Fructose-bisphosphate aldolase C-A OS=Danio rerio ... [more]
ALF1_XANCP4.411e-3347.62Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF_DROME2.859e-3252.78Fructose-bisphosphate aldolase OS=Drosophila melan... [more]
ALF1_XANAC3.734e-3246.26Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_CAEEL5.392e-3152.35Fructose-bisphosphate aldolase 1 OS=Caenorhabditis... [more]
ALF_ENCCU4.723e-2745.21Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]
ALF_LYMST6.399e-1657.14Fructose-bisphosphate aldolase (Fragment) OS=Lymna... [more]
ALDOC_CHICK4.148e-1560.66Fructose-bisphosphate aldolase C (Fragment) OS=Gal... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC05139H09SK FerrChloL1 Citrus clementina cDNA clone C05139H09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296383 ID=CX296383; Name=CX296383; organism=Citrus clementina; type=EST; length=687bp
GAGGCCTCGTGCCGAATTCGGCACGAGGGCTAAAAGTACATGTAATCATG
AACAAAAATAGTCTCCAAAGCACGGCTATAAAGCATTAACACATTTGAGA
TGACTACTCATTTCAAATTTCTTCACCATTCTTATGATCTTCGTGCTAAC
AAATTTAGTAGGTGTATCCCTTGACGAACATTCCTTTCTTGGCCTCCTCT
GATTCTCCCTCGCCAGTGTACTTGCCGAGCTGAGCAAGTGAGTTGGCCTT
GGTTCATGGCGTTCAAGTTGAGGGTTGCCTCAACCTCAGATTGCCCACCA
GACAAGAACATGATTCCGGGGACAGCTGGAGGGATTCTCCTGTGAAGGAG
CTTGAGTGTGTACTCAGCAACCTGTTGTGGTGTGGCCTTCTCCTTGCATT
CAGCACCAGGAGTGACCATGCTAGGCTTGAGGAGAATACCCTCAAACATG
ACATTGTTCTCAGCAAGGTAGAAGAAAACTTCAGCCCAAACCTTCTTAGC
TACTTCAAAAGTCCTGTCAATGCCATGATCACCATCAAGCAAGATTTCTG
GCTCCACAATTGGGACCAATCCGTTGTCTTGAGCAATGGCAGCATAGCGG
GCAAGACCCCAGGCGGCTTCCTTGACTGCCAAGGCAGATGGGCCATTGGG
AATGCTCACAACAGTACGCCATTTGGCGAAACGAGCT
back to top