CX296396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296396 vs. ExPASy Swiss-Prot
Match: SRPG_SYNE7 (Cysteine synthase, plasmid OS=Synechococcus elongatus (strain PCC 7942) GN=srpG PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.239e-25 Identity = 67/138 (48.55%), Postives = 88/138 (63.77%), Query Frame = -1 Query: 308 GTVTGAGKYLKE-HNPEIKLYGVEPVESAVLSGG------KPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVKKE 700 GT+TG +Y+K+ I VEP S V+S KPGPHKIQGIGAGFIP LD++L+D+ ++S+EEAI A+ LA +EGL+ GIS G A++ E+AGK IVVV P GERYLS+ LF+ + E Sbjct: 186 GTITGVSRYIKQTQGKPILSVAVEPEASPVISQQRSGLPLKPGPHKIQGIGAGFIPENLDLSLVDQVERVSNEEAIAYARRLAQEEGLISGISCGAAVAAAVRLAQQSEHAGKTIVVVLPDSGERYLSTALFDGIFNE 323
BLAST of CX296396 vs. ExPASy Swiss-Prot
Match: CYSK_STAES (Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=cysK PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.605e-25 Identity = 56/125 (44.80%), Postives = 83/125 (66.40%), Query Frame = -1 Query: 326 GTVTGAGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLF 700 GT++G GK LK+ P +++ +EP S VLSGG+PGPHK+QG+GAGF+P L+ + D +++ ++ A++ A+ +A +EG+L GISSG AK GK +V V PS GERYLS+ L+ Sbjct: 183 GTLSGVGKVLKKEYPNVEIVAIEPEASPVLSGGEPGPHKLQGLGAGFVPDTLNTEVYDSIIKVGNDTAMDMARRVAREEGILAGISSGAAIYAAIQKAKE-LGKGKTVVTVLPSNGERYLSTPLY 306
BLAST of CX296396 vs. ExPASy Swiss-Prot
Match: CYSK_STAEQ (Cysteine synthase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=cysK PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.605e-25 Identity = 56/125 (44.80%), Postives = 83/125 (66.40%), Query Frame = -1 Query: 326 GTVTGAGKYLKEHNPEIKLYGVEPVESAVLSGGKPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLF 700 GT++G GK LK+ P +++ +EP S VLSGG+PGPHK+QG+GAGF+P L+ + D +++ ++ A++ A+ +A +EG+L GISSG AK GK +V V PS GERYLS+ L+ Sbjct: 183 GTLSGVGKVLKKEYPNVEIVAIEPEASPVLSGGEPGPHKLQGLGAGFVPDTLNTEVYDSIIKVGNDTAMDMARRVAREEGILAGISSGAAIYAAIQKAKE-LGKGKTVVTVLPSNGERYLSTPLY 306
BLAST of CX296396 vs. ExPASy Swiss-Prot
Match: CYSK_HAEIN (Cysteine synthase OS=Haemophilus influenzae GN=cysK PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.605e-25 Identity = 65/136 (47.79%), Postives = 86/136 (63.24%), Query Frame = -1 Query: 314 GTVTGAGKYLK-EHNPEIKLYGVEPVESAVLSGG------KPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVK 700 G++TG + +K + +I VEPVES V+S KPGPHKIQGIGAGFIP LD++++D + S+ A+ TA+ L +EG+L GISSG AK PE A KLIVV+ PS ERYLS+ LFE ++ Sbjct: 180 GSITGISRAIKLDFGKQITSVAVEPVESPVISQTLAGEEVKPGPHKIQGIGAGFIPKNLDLSIIDRVETVDSDTALATARRLMAEEGILAGISSGAAVAAADRLAKLPEFADKLIVVILPSASERYLSTALFEGIE 315
BLAST of CX296396 vs. ExPASy Swiss-Prot
Match: CYSK_SALTY (Cysteine synthase A OS=Salmonella typhimurium GN=cysK PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.370e-24 Identity = 65/141 (46.10%), Postives = 86/141 (60.99%), Query Frame = -1 Query: 302 GTVTGAGKYLK--EHNPEIKLYGVEPVESAVLSGG------KPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAE 700 GT+TG +Y+K + ++ VEP +S V++ KPGPHKIQGIGAGFIPG LD+ L+D+ V I++EEAI TA+ L +EG+L GISSG + K IVV+ PS GERYLS+ LF + E E Sbjct: 180 GTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 320
BLAST of CX296396 vs. ExPASy Swiss-Prot
Match: CYSK_SALTI (Cysteine synthase A OS=Salmonella typhi GN=cysK PE=3 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.370e-24 Identity = 65/141 (46.10%), Postives = 86/141 (60.99%), Query Frame = -1 Query: 302 GTVTGAGKYLK--EHNPEIKLYGVEPVESAVLSGG------KPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAE 700 GT+TG +Y+K + ++ VEP +S V++ KPGPHKIQGIGAGFIPG LD+ L+D+ V I++EEAI TA+ L +EG+L GISSG + K IVV+ PS GERYLS+ LF + E E Sbjct: 180 GTLTGVTRYIKGTKGKTDLITVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPGNLDLKLIDKVVGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 320
BLAST of CX296396 vs. ExPASy Swiss-Prot
Match: CYSK_ECOLI (Cysteine synthase A OS=Escherichia coli (strain K12) GN=cysK PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24 Identity = 64/141 (45.39%), Postives = 84/141 (59.57%), Query Frame = -1 Query: 302 GTVTGAGKYLKEHNPEIKLYGV--EPVESAVLSGG------KPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAE 700 GT+TG +Y+K + L V EP +S V++ KPGPHKIQGIGAGFIP LD+ L+D+ + I++EEAI TA+ L +EG+L GISSG + K IVV+ PS GERYLS+ LF + E E Sbjct: 180 GTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 320
BLAST of CX296396 vs. ExPASy Swiss-Prot
Match: CYSK_ECO57 (Cysteine synthase A OS=Escherichia coli O157:H7 GN=cysK PE=3 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24 Identity = 64/141 (45.39%), Postives = 84/141 (59.57%), Query Frame = -1 Query: 302 GTVTGAGKYLKEHNPEIKLYGV--EPVESAVLSGG------KPGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESVKKEAE 700 GT+TG +Y+K + L V EP +S V++ KPGPHKIQGIGAGFIP LD+ L+D+ + I++EEAI TA+ L +EG+L GISSG + K IVV+ PS GERYLS+ LF + E E Sbjct: 180 GTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGEEIKPGPHKIQGIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGAAVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKE 320
BLAST of CX296396 vs. ExPASy Swiss-Prot
Match: CYSK_BUCAP (Cysteine synthase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=cysK PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24 Identity = 71/140 (50.71%), Postives = 86/140 (61.43%), Query Frame = -1 Query: 308 GTVTGAGKYLK--EHNPEIKLYGVEPVESAV----LSGGK--PGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLF-ESVKKE 700 GT+TG KY+K E ++ VEP+ES V LSG K PG HKIQGIGAGFIP LD++L+D + +SSEEAI AK + KEG+L GISSG K + K IVV+ PS GERYLS+ LF S K E Sbjct: 180 GTITGITKYIKIKEGKKDLISVAVEPLESPVITQFLSGKKIKPGLHKIQGIGAGFIPKNLDLSLIDRIITVSSEEAIFNAKKIMKKEGILSGISSGAAIAAALKIQKENDFKNKNIVVILPSSGERYLSTELFSRSFKNE 319
BLAST of CX296396 vs. ExPASy Swiss-Prot
Match: CYSK_BUCAI (Cysteine synthase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=cysK PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.880e-24 Identity = 65/136 (47.79%), Postives = 86/136 (63.24%), Query Frame = -1 Query: 317 GTVTGAGKYLKEHNPEIKLYG--VEPVESAVLS---GGK---PGPHKIQGIGAGFIPGVLDVNLLDETVQISSEEAIETAKLLALKEGLLVGISSGXXXXXXXXXAKRPENAGKLIVVVFPSFGERYLSSVLFESV 700 GT+TG +Y+K+ + L VEP ES V++ GK PGPHKIQGIG GFIP LD+ ++D+ + +SSEEAI TAK L KEG+L GISSG ++ + + K IVV+ PS GERYLS+ LF + Sbjct: 180 GTITGITRYIKKIKRKKNLISIAVEPSESPVITQFLAGKAIEPGPHKIQGIGPGFIPKNLDLTIIDQVITVSSEEAILTAKELMKKEGILAGISSGAALYAAIKIQQQKKFSDKKIVVILPSSGERYLSTELFSEL 315 The following BLAST results are available for this feature:
BLAST of CX296396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296396 ID=CX296396; Name=CX296396; organism=Citrus clementina; type=EST; length=712bpback to top |