CX296404
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296404 vs. ExPASy Swiss-Prot
Match: NHP2_BRABE (H/ACA ribonucleoprotein complex subunit 2-like protein OS=Branchiostoma belcheri PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.412e-11 Identity = 36/106 (33.96%), Postives = 53/106 (50.00%), Query Frame = 3 Query: 63 VNPKAYPLADSNLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQ 380 VNP A PLA LT + V++A+ K ++KG + K + +G +++A DT ED +PY +VP+KQ LG A G RP + NE+ Q Sbjct: 37 VNPIASPLAARKLTKRLYKTVKKASKEKNIRKGIRDVQKFIKKGERGIVLIAGDTTPIEVYCHLPVVCEDAKIPYCYVPAKQDLGEAAGSKRPTCCVLLKPNESYQ 142
BLAST of CX296404 vs. ExPASy Swiss-Prot
Match: RL7A_SULAC (50S ribosomal protein L7Ae OS=Sulfolobus acidocaldarius GN=rpl7ae PE=3 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.231e-11 Identity = 33/105 (31.43%), Postives = 59/105 (56.19%), Query Frame = 3 Query: 111 ILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKL 425 +L+ V++A + ++KKG NE TK + R ++ +V+A D E+K +PYV+VPSK++LG ACG+ V A SV + + K + ++ + ++ Sbjct: 19 VLEAVKKAKDSGKIKKGTNETTKAVERSQAKLVVIAEDVQPEEIVAHLPLLCEEKKIPYVYVPSKKSLGEACGL--QVAAASVALMDPGEAKDLVDEIVKRVNEI 121
BLAST of CX296404 vs. ExPASy Swiss-Prot
Match: RL7A_AERPE (50S ribosomal protein L7Ae OS=Aeropyrum pernix GN=rpl7ae PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.231e-11 Identity = 33/103 (32.04%), Postives = 59/103 (57.28%), Query Frame = 3 Query: 117 DLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTXXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEASQLKTQIQQLKDAIEKL 425 + V++A ++KKG NE TK + RG+++ +V+A D ++K +PYV+VPSK+ LG A G+ V A SV E +T ++++ + +++L Sbjct: 21 EAVKRARETGRIKKGTNETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKRLGEAAGI--EVAAASVAIIEPGDAETLVREIVEKVKEL 121 The following BLAST results are available for this feature:
BLAST of CX296404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX296404 ID=CX296404; Name=CX296404; organism=Citrus clementina; type=EST; length=638bpback to top |