CX296424
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296424 vs. ExPASy Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 6.836e-18 Identity = 53/117 (45.30%), Postives = 68/117 (58.12%), Query Frame = -2 Query: 306 YRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXAFQLRGSKAILNFPLEAGKCDSNAAVARECDSSAEAGACE---TKRKRDCESEEEERKAKVVKTESADTVNEF 647 YRGVRRRPWGK+AAEIRDP + G RVWLGT++T AFQLRGSKA LNFP G C R S E + +++KR ES ++ ++ +V E TV++F Sbjct: 92 YRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAKLNFPHLIGSCKYEPVRIRPRRRSPEPSVSDQLTSEQKR--ESHVDDGESSLVVPELDFTVDQF 206
BLAST of CX296424 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.989e-17 Identity = 50/118 (42.37%), Postives = 69/118 (58.47%), Query Frame = -2 Query: 333 KHYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXAFQLRGSKAILNFPLEAG-------KCDSNAAVARECDSSAEAGACETKRK----RDCESEEEERKAKVVKT 653 +HYRGVRRRPWGK+AAEIRDP + G RVWLGT++T A+++RGSKA LNFP G + + + E SS+E + + +RK E+ E E K+ V++T Sbjct: 103 RHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLNEPEPVRVTAKRRASPEPASSSENSSPKRRRKAVATEKSEAVEVESKSNVLQT 220
BLAST of CX296424 vs. ExPASy Swiss-Prot
Match: ERF1_SOLLC (Ethylene-responsive transcription factor 1 OS=Solanum lycopersicum GN=ERF1 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 48/121 (39.67%), Postives = 70/121 (57.85%), Query Frame = -2 Query: 336 KHYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXAFQLRGSKAILNFPLEAG-----------KCDSNAAVARECDSSAEAGACETKRK----RDCESEEEERKAKVVK 653 +HYRGVR+RPWGK+AAEIRDP + G RVWLGT+++ AF++RG+KA+LNFP G K + + + S++E+G+ + +RK + E E E R V+K Sbjct: 105 RHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYESAEEAALAYGKAAFRMRGTKALLNFPHRIGLNEPEPVRVTVKRRLSESASSSVSSASESGSPKRRRKGVAAKQAELEVESRGPNVMK 225
BLAST of CX296424 vs. ExPASy Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 3.393e-17 Identity = 45/93 (48.39%), Postives = 58/93 (62.37%), Query Frame = -2 Query: 387 KHYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXAFQLRGSKAILNFPLEAGKCDSNAAVAR----ECDSSAEAGACETKR 653 KHYRGVR+RPWGK+AAEIRDP + G RVWLGTF+T AF++RGS+A+LNFPL + + + SS E GA + +R Sbjct: 146 KHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRVNSGEPDPVRIKSKRSSFSSSNENGAPKKRR 238
BLAST of CX296424 vs. ExPASy Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16 Identity = 44/106 (41.51%), Postives = 58/106 (54.72%), Query Frame = -2 Query: 336 KHYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXAFQLRGSKAILNFPLEAGKCDSNAAVARECDSSAEAGACETKRKRDCESEEEERKAKVVK 653 +HYRGVR+RPWGK+AAEIRDP + G RVWLGT++T A+++RGSKA+LNFP G + S E + + S + RKA K Sbjct: 97 RHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLNEPEPVRLTAKRRSPEPASSSISSALENGSPKRRRKAVAAK 202
BLAST of CX296424 vs. ExPASy Swiss-Prot
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum GN=PTI5 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.751e-16 Identity = 40/62 (64.52%), Postives = 45/62 (72.58%), Query Frame = -2 Query: 468 KHYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXAFQLRGSKAILNFPLE 653 K YRGVRRRPWGKYAAEIRD R G RVWLGTF+T AF++RG+KA+LNFP E Sbjct: 57 KKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSE 118
BLAST of CX296424 vs. ExPASy Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16 Identity = 37/64 (57.81%), Postives = 47/64 (73.44%), Query Frame = -2 Query: 462 KHYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXAFQLRGSKAILNFPLEAG 653 +HYRGVR+RPWGK+AAEIRDP + G RVWLGT++T A+++RGSKA+LNFP G Sbjct: 101 RHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIG 164
BLAST of CX296424 vs. ExPASy Swiss-Prot
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana GN=ERF14 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16 Identity = 42/84 (50.00%), Postives = 52/84 (61.90%), Query Frame = -2 Query: 411 SEEKHYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXAFQLRGSKAILNFPLEAGKCDSNAAVARECDSSAE 662 +E+ YRGVRRRPWGKYAAEIRD + G RVWLGTFDT A+ +RG AILNFP E +++ A SS++ Sbjct: 15 AEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPHEYNMGTGSSSTAANSSSSSQ 98
BLAST of CX296424 vs. ExPASy Swiss-Prot
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana GN=ERF096 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 46/94 (48.94%), Postives = 55/94 (58.51%), Query Frame = -2 Query: 384 SEEKHYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXAFQLRGSKAILNFPLEAGKCDS-NAAVARECDSSAEAGACETKRK 662 +E YRGVRRRPWGKYAAEIRD + G RVWLGTFDT A+ +RG AILNFP E +++ A SSA A A + R+ Sbjct: 10 AEHGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPHEYNMGSGVSSSTAMAGSSSASASASSSSRQ 103
BLAST of CX296424 vs. ExPASy Swiss-Prot
Match: ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana GN=ERF1B PE=2 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 40/63 (63.49%), Postives = 45/63 (71.43%), Query Frame = -2 Query: 468 EKHYRGVRRRPWGKYAAEIRDPTRRGVRVWLGTFDTXXXXXXXXXXXAFQLRGSKAILNFPLE 656 EK YRGVRRRPWGK+AAEIRD TR G+RVWLGTF++ AF +RGS AILNF E Sbjct: 79 EKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAE 141 The following BLAST results are available for this feature:
BLAST of CX296424 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296424 ID=CX296424; Name=CX296424; organism=Citrus clementina; type=EST; length=687bpback to top |