CX296450
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296450 vs. ExPASy Swiss-Prot
Match: EFTU3_STRCO (Elongation factor Tu-3 OS=Streptomyces coelicolor GN=tuf3 PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 9.078e-21 Identity = 71/200 (35.50%), Postives = 100/200 (50.00%), Query Frame = 3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGD 665 + K H+NI +GHVD GK+T T I K + ER + SF +D+ E RGITI+IA ++ET + +D PGH D++KNM+TG +Q D A+L++ + G QT EH LLA +GV ++ NK DA + + D + EV L GY + VP V +SG EGD Sbjct: 8 RTKPHLNIGTMGHVDHGKTTLTA-------AITKVLAERGAGSTTQYV--SFDR---IDRAPEEAARGITINIAHVEYETDTRHYAHVDMPGHADYVKNMVTGAAQLDGAILVVSALDGIMP-------QTAEHVLLARQVGVDHIVVALNKADAGDEELT----DLVELEVRELLTAHGYGGDAVPVVRVSGLKALEGD 184
BLAST of CX296450 vs. ExPASy Swiss-Prot
Match: EFTU_PICGU (Elongation factor Tu, mitochondrial OS=Pichia guilliermondii GN=TUF1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 61/189 (32.28%), Postives = 94/189 (49.74%), Query Frame = 3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 641 + K H+NI IGHVD GK+T T + K +E +F +D+ ER RGITI A +++T K + +D PGH D+IKNMITG +Q D A++++ +T G QTREH LLA +GV+ ++ NK+D + + E+ L + G++ + P + Sbjct: 32 RSKPHVNIGTIGHVDHGKTTLTAAIT---------------KVLSEKGGANFLDYGSIDRAPEERARGITISTAHVEYQTDKRHYAHVDCPGHADYIKNMITGAAQMDGAIIVVAATDGQMP-------QTREHLLLARQVGVQHLVVFVNKVDTID---DPEMLELVEMEMRELLSQYGFDGDNTPVI 195
BLAST of CX296450 vs. ExPASy Swiss-Prot
Match: EFTU_PELUB (Elongation factor Tu OS=Pelagibacter ubique GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 62/189 (32.80%), Postives = 94/189 (49.74%), Query Frame = 3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 641 + K H NI IGHVD GK+T T + L + +++ +DK E+ERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++++ G QTREH LL +G+ ++ NK+D K +E ++E+ + K Y +K P V Sbjct: 8 RNKPHCNIGTIGHVDHGKTTLTAAITITLAELGGGKAVAYDQ---------------IDKAPEEKERGITISTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVNAADGPMP-------QTREHILLGRQVGIPAIVVYLNKVDQVDDKDMIELVEEEIRELLTSYK---YPGDKTPIV 171
BLAST of CX296450 vs. ExPASy Swiss-Prot
Match: EFTU_PELPD (Elongation factor Tu OS=Pelobacter propionicus (strain DSM 2379) GN=tuf1 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 62/189 (32.80%), Postives = 92/189 (48.68%), Query Frame = 3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 641 + K H+NI IGHVD GK+T T + L G + + F++ +D ERERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK D + + + E+ L + + +P V Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITKVLAGKGQAEFKAFDQ---------------IDNAPEERERGITIATAHVEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVYLNKADMVD---DEELLELVELEIRELLSSYDFPGDDIPIV 171
BLAST of CX296450 vs. ExPASy Swiss-Prot
Match: EFTU_MYCVP (Elongation factor Tu OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 71/201 (35.32%), Postives = 107/201 (53.23%), Query Frame = 3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK-RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPIS---GFEGD 665 + K H+NI IGHVD GK+T T I K + +++ ++N+ R+F +D ER+RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + + EV L ++ E+ P V +S EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYP----DLNESRAFDQ---IDNAPEERQRGITINISHVEYQTDKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKADMVD---DEELIELVEMEVRELLAAQDFD-EEAPVVKVSALKALEGD 183
BLAST of CX296450 vs. ExPASy Swiss-Prot
Match: EFTU_MYCA9 (Elongation factor Tu OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 68/199 (34.17%), Postives = 101/199 (50.75%), Query Frame = 3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGD 665 + K H+NI IGHVD GK+T T I K + +++ EA+ ++ +D E+ RGITI+I+ +++T K + +DAPGH D+IKNMITG +Q D A+L++ +T G QTREH LLA +GV ++ NK D + + V+E+ S G N V + EGD Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTA-------AITKVLHDKYPDLNEASAFDQ--------IDNAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTREHVLLARQVGVPYILVALNKSDMVDDEELLELVEMEVRELLSSQDFDGDNAPVVRVSALKALEGD 184
BLAST of CX296450 vs. ExPASy Swiss-Prot
Match: EFTU_MOOTA (Elongation factor Tu OS=Moorella thermoacetica (strain ATCC 39073) GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 62/189 (32.80%), Postives = 94/189 (49.74%), Query Frame = 3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 641 + K H+N+ IGHVD GK+T T + + L V +++ +DK ERERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G QTREH LLA +GV ++ NK+D + + EV L + + +++P V Sbjct: 8 RTKPHVNVGTIGHVDHGKTTLTAAITFCLAKAGGAVPTAYDQ---------------IDKAPEERERGITIATAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPYIVVFLNKVDQVD---DPELLELVEMEVRELLTEYEFPGDEIPIV 171
BLAST of CX296450 vs. ExPASy Swiss-Prot
Match: EFTU_FLAFE (Elongation factor Tu OS=Flavobacterium ferrugineum GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 64/189 (33.86%), Postives = 97/189 (51.32%), Query Frame = 3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 641 +EK H+NI IGHVD GK+T T + L +K A+ K +D E+ERGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ ++ G QT+EH LLA +GV +M+ NK+D + + + EV L K G++ + P + Sbjct: 8 REKPHVNIGTIGHVDHGKTTLTAAITDILS----------KKGLAQAKKYD-----EIDGAPEEKERGITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAASDGPMP-------QTKEHILLAAQVGVPKMVVFLNKVDLVD---DEELLELVEIEVREELTKRGFDGDNTPII 171
BLAST of CX296450 vs. ExPASy Swiss-Prot
Match: EFTU_EXISA (Elongation factor Tu OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 60/161 (37.27%), Postives = 85/161 (52.80%), Query Frame = 3 Query: 69 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMD 536 MGKEK H+N+ IGHVD GK+T T + L + +F++ +D ERERGITI A ++ET K + +D PGH D++KNMITG +Q D A+L++ +T G QTREH LL+ +GV ++ NK+D Sbjct: 1 MGKEKFDRSKPHVNVGTIGHVDHGKTTLTAAISAVLSKAQGKAATKFDQ---------------IDGAPEERERGITIATAHIEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGPMP-------QTREHILLSRQVGVPYIVVFMNKVD 139
BLAST of CX296450 vs. ExPASy Swiss-Prot
Match: EFTU_EUBE2 (Elongation factor Tu OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.186e-20 Identity = 71/215 (33.02%), Postives = 101/215 (46.98%), Query Frame = 3 Query: 75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFE---------GDNMIERSTTL 692 + K H NI IGHVD GK+T T I K + ER A + +DK ERERGITI A ++ET K + +D PGH D++KNMITG +Q D +L++ +T G QTREH LLA +GV ++ NK D D ++E+ L + G+ + P + S + GD ++E T+ Sbjct: 8 RTKPHCNIGTIGHVDHGKTTLTA-------AITKTLHERLGTGEAVAFEN-------IDKAPEERERGITISTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDAGILVVAATDGVM-------AQTREHILLARQVGVPYIVVFMNKCDMVDDPELLELVDMEIREL---LNEYGFPGDDTPIIQGSALKALEDPNSEWGDKILELMHTI 198 The following BLAST results are available for this feature:
BLAST of CX296450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296450 ID=CX296450; Name=CX296450; organism=Citrus clementina; type=EST; length=705bpback to top |