CX296454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGS_BETVU (Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic (Fragment) OS=Beta vulgaris GN=AGPB1 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 2.471e-52 Identity = 103/122 (84.43%), Postives = 110/122 (90.16%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 DSVIGEGCVIKNCKIHHSV+GLRSCISEGAIIEDTLLMGADYYETDADR+FLAAKGSVPIGIG NARIGD+VKI+NSD+VQEAARETDGYFIKSGIVTIIKDA+IPSGT+I Sbjct: 380 DSVIGEGCVIKNCKIHHSVIGLRSCISEGAIIEDTLLMGADYYETDADRKFLAAKGSVPIGIG------------NARIGDDVKIINSDNVQEAARETDGYFIKSGIVTIIKDAMIPSGTVI 489
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGC_ANAVT (Glucose-1-phosphate adenylyltransferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgC PE=3 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 5.910e-38 Identity = 70/122 (57.38%), Postives = 100/122 (81.97%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 +S+IGEGC++KNC+I HSV+G+RS I G +IE++LLMGAD+Y+ +R+ KG +P+GIG ++ I+RAIIDKNARIG +VKI+N D+VQEA RE+ G++I+SGIV ++K+A+I GTII Sbjct: 308 ESIIGEGCILKNCRIQHSVLGVRSRIETGCVIEESLLMGADFYQASVERQCSIDKGDIPVGIGPDTIIRRAIIDKNARIGHDVKIINKDNVQEADRESQGFYIRSGIVVVLKNAVITDGTII 429
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGC_ANASP (Glucose-1-phosphate adenylyltransferase OS=Anabaena sp. (strain PCC 7120) GN=glgC PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.008e-37 Identity = 70/122 (57.38%), Postives = 100/122 (81.97%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 +S+IGEGC++KNC+I HSV+G+RS I G +IE++LLMGAD+Y+ +R+ KG +P+GIG ++ I+RAIIDKNARIG +VKI+N D+VQEA RE+ G++I+SGIV ++K+A+I GTII Sbjct: 308 ESIIGEGCILKNCRIQHSVLGVRSRIETGCMIEESLLMGADFYQASVERQCSIDKGDIPVGIGPDTIIRRAIIDKNARIGHDVKIINKDNVQEADRESQGFYIRSGIVVVLKNAVITDGTII 429
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGC_CYAA5 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain ATCC 51142) GN=glgC PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 2.246e-37 Identity = 69/122 (56.56%), Postives = 100/122 (81.97%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 +S+I EGC+IK+C+IH+SV+G+RS I ++ED+LLMGADYYE+ R+ L +G +P+GIGK S I+RAI+DKNARIG NV IVN ++++E+ RE DG++I++GIV +IK+A+IP GT+I Sbjct: 308 ESMISEGCMIKDCRIHNSVLGIRSRIETDCVVEDSLLMGADYYESLETRQSLLDQGKIPVGIGKGSTIRRAIVDKNARIGQNVTIVNKENIEESNREDDGFYIRNGIVVVIKNAVIPDGTVI 429
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGC_NOSP7 (Glucose-1-phosphate adenylyltransferase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=glgC PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 2.933e-37 Identity = 69/122 (56.56%), Postives = 98/122 (80.33%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 +S+IGEGC++KNC+I HSV+G+RS I G +IE++LLMGAD+Y+ +R+ + +P+GIG ++ I+ AIIDKNARIG +VKIVN D+VQEA RE G++I+SGIV ++K+A+IP GTII Sbjct: 308 ESIIGEGCILKNCRIQHSVLGVRSRIESGCVIEESLLMGADFYQASVERQCSLIENDIPVGIGTDTIIRGAIIDKNARIGHDVKIVNKDNVQEAERENQGFYIRSGIVVVLKNAVIPDGTII 429
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGC_SYNPW (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain WH7803) GN=glgC PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 7.224e-36 Identity = 63/122 (51.64%), Postives = 97/122 (79.51%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 DS+IGEG ++K+C IHHSV+G+RS + + +++D+LLMG+D++E+ ++R L +G +P+G+GK + +KRAI+DKNARIG NV IVN D V+EA R G++I++GIV ++K+A IP GT+I Sbjct: 310 DSIIGEGSILKSCSIHHSVLGVRSRVEDEVVLQDSLLMGSDFFESSSERAVLRERGGIPLGVGKGTTVKRAILDKNARIGSNVTIVNKDHVEEADRPEHGFYIRNGIVVVVKNASIPDGTVI 431
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP7 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 7424) GN=glgC PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 7.224e-36 Identity = 68/122 (55.74%), Postives = 93/122 (76.23%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 +S+I EGC++K+C+IHHSV+G+RS + IED++LMGADYYE+ R+ + G VP GIG + I+RAIIDKNARIG NV I+N D ++EA RE +G+ I+SGIV +IK+A IP GT+I Sbjct: 308 ESMISEGCILKDCRIHHSVLGIRSRVESDCTIEDSMLMGADYYESSTKRKAVLEAGKVPQGIGAGTTIRRAIIDKNARIGRNVLIINKDRIEEAEREDEGFLIRSGIVVVIKNATIPDGTVI 429
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP4 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=glgC PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.745e-35 Identity = 66/122 (54.10%), Postives = 97/122 (79.51%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 +S+IGEGC++KNC+I HSV+G+RS I G +I++ LLMGAD+Y+ A+R SVP+GIG ++ ++RAI+DKNA IG NVKIVN D V+EA RE++G++I++GIV ++K+A+IP T+I Sbjct: 308 ESIIGEGCILKNCQIQHSVLGVRSRIESGCVIDNALLMGADFYQPFAERDHKIKNNSVPLGIGADTIVRRAIVDKNACIGRNVKIVNKDHVEEANRESEGFYIRNGIVVVLKNAVIPDNTVI 429
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGC_SYNP2 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=glgC PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.682e-35 Identity = 67/122 (54.92%), Postives = 94/122 (77.05%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 +S+I EGC+IKNC+IHHSV+G+R+ + IEDT++MGADYY+ R+ +G PIGIG+ + I+RAIIDKNARIG NV IVN ++V+E+ RE GY+I+SGI ++K+A+IP GT+I Sbjct: 308 ESMISEGCIIKNCRIHHSVLGIRTRVEADCTIEDTMIMGADYYQPYEKRQDCLRRGKPPIGIGEGTTIRRAIIDKNARIGKNVMIVNKENVEESNREELGYYIRSGITVVLKNAVIPDGTVI 429
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGC_SYNY3 (Glucose-1-phosphate adenylyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=glgC PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 1.043e-34 Identity = 69/122 (56.56%), Postives = 93/122 (76.23%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 +S+IGEGC+IK C+IHHSV+G+RS I IEDTL+MG D+YE+ ++R L A+G + GIG + I+RAIIDKNARIG NV IVN ++VQEA RE G++I++GIV +IK+ I GT+I Sbjct: 318 ESMIGEGCMIKQCRIHHSVLGIRSRIESDCTIEDTLVMGNDFYESSSERDTLKARGEIAAGIGSGTTIRRAIIDKNARIGKNVMIVNKENVQEANREELGFYIRNGIVVVIKNVTIADGTVI 439 The following BLAST results are available for this feature:
BLAST of CX296454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296454 ID=CX296454; Name=CX296454; organism=Citrus clementina; type=EST; length=429bpback to top |