CX296454
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGC_SYNP6 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=glgC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.569e-33 Identity = 67/121 (55.37%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 10 SVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 S+IGEGC++K C + +SV+G+RS I +I+D LLMGAD+YET R A G VP+GIG S I+RAI+DKNA IG NV+IVN D V+EA RE G+ I+SGIV ++K A+IP T+I Sbjct: 310 SIIGEGCILKQCTVQNSVLGIRSRIEADCVIQDALLMGADFYETSELRHQNRANGKVPMGIGSGSTIRRAIVDKNAHIGQNVQIVNKDHVEEADREDLGFMIRSGIVVVVKGAVIPDNTVI 430
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGC_SYNE7 (Glucose-1-phosphate adenylyltransferase OS=Synechococcus elongatus (strain PCC 7942) GN=glgC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.569e-33 Identity = 67/121 (55.37%), Postives = 88/121 (72.73%), Query Frame = 1 Query: 10 SVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 S+IGEGC++K C + +SV+G+RS I +I+D LLMGAD+YET R A G VP+GIG S I+RAI+DKNA IG NV+IVN D V+EA RE G+ I+SGIV ++K A+IP T+I Sbjct: 310 SIIGEGCILKQCTVQNSVLGIRSRIEADCVIQDALLMGADFYETSELRHQNRANGKVPMGIGSGSTIRRAIVDKNAHIGQNVQIVNKDHVEEADREDLGFMIRSGIVVVVKGAVIPDNTVI 430
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGC_CYAP8 (Glucose-1-phosphate adenylyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=glgC PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.569e-33 Identity = 62/122 (50.82%), Postives = 95/122 (77.87%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 +S++ EGC++K+C+IH+S++G+R+ I IEDT+LMGADYYE+ + R A +G +P+GIG+ S I+RAI+DKNARIG NV IVN +++ E+ +E G++I++GIV I+K+A I GT+I Sbjct: 308 ESMVSEGCILKDCRIHNSILGIRTRIEANCTIEDTMLMGADYYESPSLRESKAQEGKIPMGIGEGSTIRRAIVDKNARIGRNVTIVNKENIDESNQEESGFYIRNGIVVILKNATIADGTVI 429
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGL3_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 3, chloroplastic/amyloplastic OS=Solanum tuberosum GN=AGPS3 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 1.275e-32 Identity = 65/122 (53.28%), Postives = 89/122 (72.95%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 DS++ G + NC + HSVVG+RS I ++DT+++GADYYETDA+ R A+G VP+GIG+N+ IK IIDKNARIG NV I NS+ VQEA R ++G+++ SGI I K++ IP GT+I Sbjct: 362 DSIVSHGIFLTNCFVEHSVVGIRSRIGTNVHLKDTVMLGADYYETDAEIRSQLAEGKVPLGIGENTRIKDCIIDKNARIGKNVVIANSEGVQEADRSSEGFYMASGITVISKNSTIPDGTVI 483
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGL1_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic OS=Arabidopsis thaliana GN=ADG2 PE=1 SV=3) HSP 1 Score: 137.502 bits (345), Expect = 2.175e-32 Identity = 62/122 (50.82%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 DS+I G + NC I HS+VG+RS + ++DT+++GADYYET+A+ L A+G+VPIGIG+N+ I+ IIDKNAR+G NV I NS+ +QEA R +DG++I+SGI I+K+++I G +I Sbjct: 401 DSIISHGSFLTNCLIEHSIVGIRSRVGSNVQLKDTVMLGADYYETEAEVAALLAEGNVPIGIGENTKIQECIIDKNARVGKNVIIANSEGIQEADRSSDGFYIRSGITVILKNSVIKDGVVI 522
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGL1_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 1 (Fragment) OS=Solanum tuberosum GN=AGPS1 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 2.841e-32 Identity = 61/122 (50.00%), Postives = 91/122 (74.59%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 D++I GC +++C + HS+VG RS + G ++DT +MGADYY+T+++ L A+G VPIGIG+N+ I++ IIDKNA+IG NV I+N D VQEA R +G++I+SGI+ I++ A I GT+I Sbjct: 349 DAIISHGCFLRDCSVEHSIVGERSRLDCGVELKDTFMMGADYYQTESEIASLLAEGKVPIGIGENTKIRKCIIDKNAKIGKNVSIINKDGVQEADRPEEGFYIRSGIIIILEKATIRDGTVI 470
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGL1_WHEAT (Glucose-1-phosphate adenylyltransferase large subunit (Fragment) OS=Triticum aestivum GN=AGA.1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.410e-31 Identity = 61/122 (50.00%), Postives = 89/122 (72.95%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 DS+I GC + C++ HSVVG+RS I ++DT+++GAD+YETD +R A+G VPIGIG+N+ I+ IIDKNARIG NV I N++ VQEA R ++G+ I+SGI ++K+++I G +I Sbjct: 180 DSIISHGCFLDKCRVEHSVVGIRSRIGSNVHLKDTVMLGADFYETDMERGDQLAEGKVPIGIGENTSIQNCIIDKNARIGKNVTIANAEGVQEADRASEGFHIRSGITVVLKNSVIADGLVI 301
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGL2_SOLTU (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic/amyloplastic OS=Solanum tuberosum GN=AGPS2 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 5.357e-31 Identity = 59/122 (48.36%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 D++I GC ++ C I HS+VG+RS + G +DT++MGADYY+T+ + L A+G VPIG+G N+ I+ IIDKNA+IG +V I+N + V+EA R +G++I+SGI I+K+A I GT+I Sbjct: 398 DAIISHGCFLRECNIQHSIVGVRSRLDYGVEFKDTMMMGADYYQTECEIASLLAEGKVPIGVGPNTKIQNCIIDKNAKIGKDVVILNKEGVEEADRSAEGFYIRSGITVIMKNATIKDGTVI 519
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGL2_ARATH (Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic OS=Arabidopsis thaliana GN=APL2 PE=2 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 9.138e-31 Identity = 56/119 (47.06%), Postives = 86/119 (72.27%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSG 363 DS++ GC ++ C + HS+VG+RS + G ++DT++MGAD+Y+T+A+ L A+G VP+G+G+N+ IK IIDKNA+IG NV I N+D V+E R +G+ I+SGI ++K+A I G Sbjct: 397 DSIVSHGCFLRECSVQHSIVGIRSRLESGVELQDTMMMGADFYQTEAEIASLLAEGKVPVGVGQNTKIKNCIIDKNAKIGKNVVIANADGVEEGDRPEEGFHIRSGITVVLKNATIRDG 515
BLAST of CX296454 vs. ExPASy Swiss-Prot
Match: GLGL1_BETVU (Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic OS=Beta vulgaris GN=AGPS1 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.193e-30 Identity = 58/122 (47.54%), Postives = 88/122 (72.13%), Query Frame = 1 Query: 7 DSVIGEGCVIKNCKIHHSVVGLRSCISEGAIIEDTLLMGADYYETDADRRFLAAKGSVPIGIGKNSHIKRAIIDKNARIGDNVKIVNSDSVQEAARETDGYFIKSGIVTIIKDALIPSGTII 372 DS++ GC ++ I HS+VG+RS + G +DT++MGADYY+T+++ L A+G VP+G+G+N+ IK IIDKNA+IG +V I N+D V+EA R +G++I+SGI I+K+A I G +I Sbjct: 401 DSIVSHGCFLQESSIQHSIVGVRSRLESGVEFQDTMMMGADYYQTESEIASLLAEGKVPVGVGQNTKIKNCIIDKNAKIGKDVVIANTDGVEEADRPNEGFYIRSGITIILKNATIQDGLVI 522 The following BLAST results are available for this feature:
BLAST of CX296454 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296454 ID=CX296454; Name=CX296454; organism=Citrus clementina; type=EST; length=429bpback to top |