CX296468
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296468 vs. ExPASy Swiss-Prot
Match: RS9_RICAH (30S ribosomal protein S9 OS=Rickettsia akari (strain Hartford) GN=rpsI PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.744e-23 Identity = 59/104 (56.73%), Postives = 68/104 (65.38%), Query Frame = -2 Query: 342 KIHVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 653 KI VN K D YFP + +LRPF T T+ +DV CTV+GGGVSGQ GA+ GIS+AL PD LR G LTRDSRVVERKK G+ KARK Q+ KR Sbjct: 58 KIVVNKKTIDQYFPSETYVKTILRPFVLTNTIDQYDVICTVRGGGVSGQKGAILHGISKALDKSVPDFHTILRKGGLLTRDSRVVERKKYGQRKARKKTQFSKR 161
BLAST of CX296468 vs. ExPASy Swiss-Prot
Match: RS9_CAUCR (30S ribosomal protein S9 OS=Caulobacter crescentus GN=rpsI PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.744e-23 Identity = 57/103 (55.34%), Postives = 73/103 (70.87%), Query Frame = -2 Query: 342 IHVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 650 I +N ++ +VYF R + +P T LG +DV TV+G G+SGQ GA+R G+S+AL +EP LRP L+ GFLTRDSRVVERKK GKAKAR+SFQ+ KR Sbjct: 55 ITINGRDQEVYFARPVLRMMIAQPLEVTDRLGQFDVVVTVEGSGLSGQAGAIRHGLSKALTYYEPGLRPVLKPHGFLTRDSRVVERKKYGKAKARRSFQFSKR 157
BLAST of CX296468 vs. ExPASy Swiss-Prot
Match: RS9_CAUCN (30S ribosomal protein S9 OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=rpsI PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.744e-23 Identity = 57/103 (55.34%), Postives = 73/103 (70.87%), Query Frame = -2 Query: 342 IHVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 650 I +N ++ +VYF R + +P T LG +DV TV+G G+SGQ GA+R G+S+AL +EP LRP L+ GFLTRDSRVVERKK GKAKAR+SFQ+ KR Sbjct: 55 ITINGRDQEVYFARPVLRMMIAQPLEVTDRLGQFDVVVTVEGSGLSGQAGAIRHGLSKALTYYEPGLRPVLKPHGFLTRDSRVVERKKYGKAKARRSFQFSKR 157
BLAST of CX296468 vs. ExPASy Swiss-Prot
Match: RS9_BEII9 (30S ribosomal protein S9 OS=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rpsI PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.744e-23 Identity = 57/104 (54.81%), Postives = 72/104 (69.23%), Query Frame = -2 Query: 342 KIHVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 653 K+ VN + DVYF R L +P K + +D+ TV GGG+SGQ GAVR G+++AL N+EP+LR AL+ GFLTRDSR VERKK GK KAR+SFQ+ KR Sbjct: 56 KVTVNGRPLDVYFARPVLRMILQQPLGVAKRVDQYDLMVTVAGGGLSGQAGAVRHGLAKALVNYEPELRSALKKEGFLTRDSRTVERKKYGKKKARRSFQFSKR 159
BLAST of CX296468 vs. ExPASy Swiss-Prot
Match: RS9_AGRT5 (30S ribosomal protein S9 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rpsI PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.744e-23 Identity = 57/104 (54.81%), Postives = 71/104 (68.27%), Query Frame = -2 Query: 342 KIHVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 653 KI +N ++F YF + L +P G +D+ TV GGG+SGQ GAVR G+S+AL +EP LRP L+ GFLTRDSRVVERKK GKAKAR+SFQ+ KR Sbjct: 52 KIIINGRDFTTYFARPVLQMILQQPLVAAARAGQFDIIATVAGGGLSGQAGAVRHGVSKALTYFEPGLRPVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 155
BLAST of CX296468 vs. ExPASy Swiss-Prot
Match: RS9_AGRVS (30S ribosomal protein S9 OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.278e-23 Identity = 60/104 (57.69%), Postives = 71/104 (68.27%), Query Frame = -2 Query: 342 KIHVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 653 KI VN ++F VYF + L +P G +DV TV GGG+SGQ GAVR GIS+AL +EP LR L+ GFLTRDSRVVERKK GKAKAR+SFQ+ KR Sbjct: 52 KITVNGRDFPVYFARPVLQMILQQPVVAAARTGQFDVIATVTGGGLSGQAGAVRHGISKALTYFEPGLRSVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 155
BLAST of CX296468 vs. ExPASy Swiss-Prot
Match: RS9_BARQU (30S ribosomal protein S9 OS=Bartonella quintana GN=rpsI PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.975e-23 Identity = 59/104 (56.73%), Postives = 71/104 (68.27%), Query Frame = -2 Query: 342 KIHVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 653 KI +N+KEFD YF R L +P +D+ TV GGG+SGQ GAVR GIS+AL +EP+ R L+ GFLTRDSRVVERKK GKAKAR+SFQ+ KR Sbjct: 58 KITINNKEFDKYFARPVLRMILRQPIVAINRDTQFDIIATVTGGGLSGQAGAVRHGISKALTYYEPEFRTILKKRGFLTRDSRVVERKKYGKAKARRSFQFSKR 161
BLAST of CX296468 vs. ExPASy Swiss-Prot
Match: RS9_STRGC (30S ribosomal protein S9 OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.886e-23 Identity = 55/104 (52.88%), Postives = 71/104 (68.27%), Query Frame = -2 Query: 342 KIHVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 653 KI VN K+ + Y P D R + +PF+ T T+G +DV V GGG GQ GA+R GI+RAL +PD R +L+ AG LTRD+R+VERKKPG KARK+ Q+ KR Sbjct: 27 KITVNKKDVEEYIPHADLRLVINQPFAVTSTVGQYDVFVNVNGGGYGGQAGAIRHGIARALLQVDPDFRDSLKRAGLLTRDARMVERKKPGLKKARKASQFSKR 130
BLAST of CX296468 vs. ExPASy Swiss-Prot
Match: RS9_RICRS (30S ribosomal protein S9 OS=Rickettsia rickettsii (strain Sheila Smith) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.886e-23 Identity = 57/104 (54.81%), Postives = 69/104 (66.35%), Query Frame = -2 Query: 342 KIHVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 653 KI VN K YFP + +L+PF TKT+ +D+ CTV+GGG+SGQ GA+ GIS+AL PD R LR G LTRDSRVVERKK G+ KARK Q+ KR Sbjct: 56 KIVVNKKTIAQYFPSETYVKTILQPFVLTKTIDQYDIICTVRGGGISGQKGAILHGISKALDKSAPDFRAILRKGGLLTRDSRVVERKKYGQRKARKKTQFSKR 159
BLAST of CX296468 vs. ExPASy Swiss-Prot
Match: RS9_RICRO (30S ribosomal protein S9 OS=Rickettsia rickettsii (strain Iowa) GN=rpsI PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.886e-23 Identity = 57/104 (54.81%), Postives = 69/104 (66.35%), Query Frame = -2 Query: 342 KIHVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 653 KI VN K YFP + +L+PF TKT+ +D+ CTV+GGG+SGQ GA+ GIS+AL PD R LR G LTRDSRVVERKK G+ KARK Q+ KR Sbjct: 56 KIVVNKKTIAQYFPSETYVKTILQPFVLTKTIDQYDIICTVRGGGISGQKGAILHGISKALDKSAPDFRAILRKGGLLTRDSRVVERKKYGQRKARKKTQFSKR 159 The following BLAST results are available for this feature:
BLAST of CX296468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296468 ID=CX296468; Name=CX296468; organism=Citrus clementina; type=EST; length=666bpback to top |