CX296484
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_THEEB (Elongation factor Tu OS=Thermosynechococcus elongatus (strain BP-1) GN=tuf PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.946e-15 Identity = 36/58 (62.07%), Postives = 48/58 (82.76%), Query Frame = -1 Query: 401 VSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 574 ++S +D + ++MVMPGDR+KM VELI P+A EQGMRF+IREGG+T+GAGV+ IIE Sbjct: 352 ITSFTSDDGSAAEMVMPGDRIKMTVELIQPIAIEQGMRFAIREGGRTIGAGVVSKIIE 409
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_EUGGR (Elongation factor Tu, chloroplastic OS=Euglena gracilis GN=tufA PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.946e-15 Identity = 37/59 (62.71%), Postives = 49/59 (83.05%), Query Frame = -1 Query: 401 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 577 ++ S +D D ++MVMPGDR+KM VELI P+A E+GMRF+IREGG+TVGAGV+ SII+ Sbjct: 351 KIESFRSDNDNPAQMVMPGDRIKMKVELIQPIAIEKGMRFAIREGGRTVGAGVVLSIIQ 409
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_SYNJB (Elongation factor Tu OS=Synechococcus sp. GN=tuf PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.847e-15 Identity = 37/58 (63.79%), Postives = 47/58 (81.03%), Query Frame = -1 Query: 401 VSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 574 +SS D ++ +MVMPGDRVKM VELI P+A EQGMRF+IREGG+TVGAGV+ I++ Sbjct: 352 ISSFTADDGSQPEMVMPGDRVKMTVELIQPIAIEQGMRFAIREGGRTVGAGVVSKILK 409
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_MESVI (Elongation factor Tu, chloroplastic OS=Mesostigma viride GN=tufA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.563e-15 Identity = 35/59 (59.32%), Postives = 48/59 (81.36%), Query Frame = -1 Query: 401 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 577 ++ S D ++++MVMPGDRVKMVV LI P+A E+GMRF+IREGG+TVGAG++ I+E Sbjct: 352 KIDSFKADDGSDTQMVMPGDRVKMVVSLIQPIAIEKGMRFAIREGGRTVGAGIVSEILE 410
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_LEPTE (Elongation factor Tu, chloroplastic OS=Leptosira terrestris GN=tufA PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.563e-15 Identity = 35/58 (60.34%), Postives = 48/58 (82.76%), Query Frame = -1 Query: 404 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSII 577 ++ + TD D ++MVMPGDR+KM VELI P+A E+GMRF+IREGG+TVGAGV+ +I+ Sbjct: 351 KIETFRTDDDQPTQMVMPGDRIKMEVELIQPIAIEKGMRFAIREGGRTVGAGVVSAIV 408
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_CHLVU (Elongation factor Tu, chloroplastic OS=Chlorella vulgaris GN=tufA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.571e-15 Identity = 34/58 (58.62%), Postives = 48/58 (82.76%), Query Frame = -1 Query: 404 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSII 577 ++ S D + ++MVMPGDR+KM+VELI P+A E+GMRF+IREGG+TVGAGV+ +I+ Sbjct: 351 KIESFRADDNTATQMVMPGDRIKMIVELIQPIAIEKGMRFAIREGGRTVGAGVVSTIV 408
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_OLTVI (Elongation factor Tu, chloroplastic OS=Oltmannsiellopsis viridis GN=tufA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.119e-14 Identity = 36/58 (62.07%), Postives = 48/58 (82.76%), Query Frame = -1 Query: 404 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSII 577 ++ S + D + S+MVMPGDRVKM+VELI P+A E+GMRF+IREGG+TVGAGV+ I+ Sbjct: 352 KIESFVADDGSASQMVMPGDRVKMLVELINPIAVEKGMRFAIREGGRTVGAGVVSEIL 409
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_CYACA (Elongation factor Tu, chloroplastic OS=Cyanidium caldarium GN=tufA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.462e-14 Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = -1 Query: 401 VSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 574 +S TD ++MV+PGDR+KM VELI PVA EQGMRF+IREGG+TVGAG++ I++ Sbjct: 353 ISQFTTDDGGSAEMVLPGDRIKMTVELIHPVAIEQGMRFAIREGGRTVGAGIVSKILD 410
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_TRIEI (Elongation factor Tu OS=Trichodesmium erythraeum (strain IMS101) GN=tuf PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.494e-14 Identity = 35/58 (60.34%), Postives = 46/58 (79.31%), Query Frame = -1 Query: 401 VSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 574 + S D + ++MVMPGDR+KM V+LI PVA EQGMRF+IREGG+T+GAGV+ I+E Sbjct: 352 IESFTADDGSVAEMVMPGDRIKMTVQLINPVAIEQGMRFAIREGGRTIGAGVVSKIVE 409
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_SYNJA (Elongation factor Tu OS=Synechococcus sp. (strain JA-3-3Ab) GN=tuf PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.494e-14 Identity = 35/58 (60.34%), Postives = 47/58 (81.03%), Query Frame = -1 Query: 401 VSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 574 ++S D ++ +MVMPGDRV+M VELI P+A EQGMRF+IREGG+TVGAGV+ I++ Sbjct: 352 ITSFTADDGSKPEMVMPGDRVRMTVELIQPIAIEQGMRFAIREGGRTVGAGVVSKILK 409 The following BLAST results are available for this feature:
BLAST of CX296484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296484 ID=CX296484; Name=CX296484; organism=Citrus clementina; type=EST; length=577bpback to top |