CX296484
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_SYNP6 (Elongation factor Tu OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=tuf PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 9.476e-14 Identity = 33/58 (56.90%), Postives = 46/58 (79.31%), Query Frame = -1 Query: 401 VSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 574 +S D + ++MV+PGDR+KM VELI P+A EQGMRF+IREGG+T+GAGV+ I++ Sbjct: 352 ISDFTADDGSAAEMVIPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGAGVVSKILQ 409
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_SYNE7 (Elongation factor Tu OS=Synechococcus elongatus (strain PCC 7942) GN=tuf PE=3 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 9.476e-14 Identity = 33/58 (56.90%), Postives = 46/58 (79.31%), Query Frame = -1 Query: 401 VSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 574 +S D + ++MV+PGDR+KM VELI P+A EQGMRF+IREGG+T+GAGV+ I++ Sbjct: 352 ISDFTADDGSAAEMVIPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGAGVVSKILQ 409
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_SYNY3 (Elongation factor Tu OS=Synechocystis sp. (strain PCC 6803) GN=tuf PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.238e-13 Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = -1 Query: 401 VSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 574 + S D + +MVMPGDR+KM VELI P+A EQGMRF+IREGG+T+GAGV+ I++ Sbjct: 342 IKSYTADDGSAVEMVMPGDRIKMTVELINPIAIEQGMRFAIREGGRTIGAGVVSKILK 399
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_GRATL (Elongation factor Tu, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=tufA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.238e-13 Identity = 34/58 (58.62%), Postives = 45/58 (77.59%), Query Frame = -1 Query: 401 VSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 574 ++ D + ++MVMPGDR+KM ELI P+A EQGMRF+IREGG+TVGAGV+ I+E Sbjct: 352 ITQFTADDGSAAEMVMPGDRIKMSAELINPIAIEQGMRFAIREGGRTVGAGVVSKILE 409
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_PROM2 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9215) GN=tuf PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.616e-13 Identity = 34/59 (57.63%), Postives = 47/59 (79.66%), Query Frame = -1 Query: 401 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 577 ++++ +D + +MVMPGDR+KM ELI PVA EQGMRF+IREGG+T+GAGV+ II+ Sbjct: 341 QITAFTSDDGSNVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIK 399
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_EMIHU (Elongation factor Tu, chloroplastic OS=Emiliania huxleyi GN=tufA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.616e-13 Identity = 34/52 (65.38%), Postives = 43/52 (82.69%), Query Frame = -1 Query: 401 DKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 556 D + ++MVMPGDR+KM ELI P+A EQGMRF+IREGG+TVGAGV+ I+E Sbjct: 356 DDGSAAEMVMPGDRIKMTAELINPIAIEQGMRFAIREGGRTVGAGVVSKILE 407
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_PROMA (Elongation factor Tu OS=Prochlorococcus marinus GN=tuf PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.111e-13 Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = -1 Query: 401 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 577 ++++ D + +MVMPGDR+KM ELI PVA EQGMRF+IREGG+T+GAGV+ II+ Sbjct: 341 QITAFTADDGSSVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIK 399
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_PROM4 (Elongation factor Tu OS=Prochlorococcus marinus (strain MIT 9211) GN=tuf PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.111e-13 Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = -1 Query: 401 RVSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 577 ++++ D + +MVMPGDR+KM ELI PVA EQGMRF+IREGG+T+GAGV+ II+ Sbjct: 341 QITAFTADDGSNVEMVMPGDRIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIK 399
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_NOSP7 (Elongation factor Tu OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=tuf PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.111e-13 Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = -1 Query: 401 VSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 574 + + +D+ E +MVMPGDR+KM VELI +A EQGMRF+IREGG+T+GAGV+ II+ Sbjct: 352 IKAYTSDEGKEVEMVMPGDRIKMTVELINAIAIEQGMRFAIREGGRTIGAGVVSKIIK 409
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_GUITH (Elongation factor Tu, chloroplastic OS=Guillardia theta GN=tufA PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.111e-13 Identity = 33/58 (56.90%), Postives = 46/58 (79.31%), Query Frame = -1 Query: 401 VSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 574 ++ +D + ++MVMPGDR+KM +LI P+A E+GMRF+IREGG+TVGAGV+ IIE Sbjct: 351 IAQFTSDDGSTAEMVMPGDRIKMTAQLIHPIAIEKGMRFAIREGGRTVGAGVVSKIIE 408 The following BLAST results are available for this feature:
BLAST of CX296484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296484 ID=CX296484; Name=CX296484; organism=Citrus clementina; type=EST; length=577bpback to top |