CX296484
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_KOSOT (Elongation factor Tu OS=Kosmotoga olearia (strain TBF 19.5.1) GN=tuf PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.048e-12 Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = -1 Query: 401 VSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 574 V+ + D +MVMPGD V M VELI PVA E+GMRF++REGG+TVGAGV+ IIE Sbjct: 342 VTGELVDLPEGVEMVMPGDNVVMTVELIYPVAIEKGMRFAVREGGRTVGAGVVSEIIE 399
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_CYCME (Elongation factor Tu, chloroplastic OS=Cyclotella meneghiniana GN=tufA PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.048e-12 Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = -1 Query: 401 VSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 574 + D + +MVMPGDR+KM ELI PVA E+GMRF IREGG+T+GAGV+ I++ Sbjct: 352 IDQFTADDGSIVEMVMPGDRIKMTAELIYPVAIEEGMRFVIREGGRTIGAGVVSKIVK 409
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_SCEOB (Elongation factor Tu, chloroplastic OS=Scenedesmus obliquus GN=tufA PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.981e-12 Identity = 31/51 (60.78%), Postives = 44/51 (86.27%), Query Frame = -1 Query: 401 KDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 553 ++ +KM MPGDR+++ V+LI PVA E+GMRF+IREGG+TVGAGV+ +I+E Sbjct: 368 EEHSNKMAMPGDRIEVTVQLIYPVAVEKGMRFAIREGGRTVGAGVVTNILE 418
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU2_ROSCS (Elongation factor Tu 2 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=tuf2 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.981e-12 Identity = 30/46 (65.22%), Postives = 43/46 (93.48%), Query Frame = -1 Query: 401 KMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 538 +MVMPGD ++M+VELI+PVA E+G+RF+IREGG+TVGAGV+ +I++ Sbjct: 356 EMVMPGDNIEMLVELIVPVAIEEGLRFAIREGGRTVGAGVVSAIVD 401
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU1_ROSCS (Elongation factor Tu 1 OS=Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN=tuf1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.981e-12 Identity = 30/46 (65.22%), Postives = 43/46 (93.48%), Query Frame = -1 Query: 401 KMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 538 +MVMPGD ++M+VELI+PVA E+G+RF+IREGG+TVGAGV+ +I++ Sbjct: 356 EMVMPGDNIEMLVELIVPVAIEEGLRFAIREGGRTVGAGVVSAIVD 401
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU1_HALHL (Elongation factor Tu 1 OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=tuf1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.981e-12 Identity = 32/47 (68.09%), Postives = 40/47 (85.11%), Query Frame = -1 Query: 401 SKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 541 ++MVMPGD VKM V+LI P+A E G+RF+IREGG+TVGAGV+ IIE Sbjct: 350 TEMVMPGDNVKMTVQLIAPIAMEDGLRFAIREGGRTVGAGVVSKIIE 396
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_THEM4 (Elongation factor Tu OS=Thermosipho melanesiensis (strain BI429 / DSM 12029) GN=tuf PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.200e-12 Identity = 33/58 (56.90%), Postives = 46/58 (79.31%), Query Frame = -1 Query: 401 VSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 574 V+ + + A +MVMPGD V+M ++LI PVA E+GMRF+IREGG+TVGAGV+ +I+E Sbjct: 343 VTGELIEFPAGVEMVMPGDNVEMTIKLIYPVAIEEGMRFAIREGGRTVGAGVVTAIVE 400
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_SPIPL (Elongation factor Tu OS=Spirulina platensis GN=tuf PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.200e-12 Identity = 31/57 (54.39%), Postives = 42/57 (73.68%), Query Frame = -1 Query: 404 VSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSII 574 + D + +MV+PGDR+ M V+LI P+A EQGMRF+IREGG+TVGAGV+ I+ Sbjct: 353 IDEFTADDGSTPEMVIPGDRINMTVQLICPIAIEQGMRFAIREGGRTVGAGVVAKIL 409
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_PHATR (Elongation factor Tu, chloroplastic OS=Phaeodactylum tricornutum GN=tufA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.200e-12 Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = -1 Query: 401 VSSIMTDKDAESKMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 574 ++ D + +MVMPGDR+KM E I PVA E GMRF+IREGG+T+GAGV+ I++ Sbjct: 352 ITQFTADDGSVVEMVMPGDRIKMTAEFIYPVAIEAGMRFAIREGGRTIGAGVVSKIVK 409
BLAST of CX296484 vs. ExPASy Swiss-Prot
Match: EFTU_DICNV (Elongation factor Tu OS=Dichelobacter nodosus (strain VCS1703A) GN=tuf PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.200e-12 Identity = 31/46 (67.39%), Postives = 41/46 (89.13%), Query Frame = -1 Query: 401 KMVMPGDRVKMVVELIMPVACEQGMRFSIREGGKTVGAGVIQSIIE 538 +MVMPGD VKM+V+LI P+A ++G+RF+IREGG+TVGAGV+ IIE Sbjct: 351 EMVMPGDNVKMIVQLIHPIAMDEGLRFAIREGGRTVGAGVVAKIIE 396 The following BLAST results are available for this feature:
BLAST of CX296484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 360
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296484 ID=CX296484; Name=CX296484; organism=Citrus clementina; type=EST; length=577bpback to top |