CX296496 | Citrus Genome Database

Overview


Name	CX296496
Unique Name	CX296496
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	732

Libraries


Library Name	Type
FerrChloL1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Ccv1_Contig10338	contig	Ccv1_Contig10338:644..1377.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CX296496 vs. ExPASy Swiss-Prot
Match: UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.000e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 2.000e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 563
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 70.8626 bits (172), Expect = 2.396e-14
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 3

Query:  564 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 674
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIP
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 37

HSP 4 Score: 26.9498 bits (58), Expect = 2.396e-14
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 2

Query:  680 QQRLIFAGKQLE 715
            QQRLIFAGKQLE
Sbjct:   40 QQRLIFAGKQLE 51

[Close]

BLAST of CX296496 vs. ExPASy Swiss-Prot
Match: UBIQ_BOVIN (Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.000e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 2.000e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 563
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 70.8626 bits (172), Expect = 2.396e-14
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 3

Query:  564 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 674
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIP
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 37

HSP 4 Score: 26.9498 bits (58), Expect = 2.396e-14
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 2

Query:  680 QQRLIFAGKQLE 715
            QQRLIFAGKQLE
Sbjct:   40 QQRLIFAGKQLE 51

[Close]

BLAST of CX296496 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.613e-34
Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.591 bits (366), Expect = 2.613e-34
Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 563
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 70.4774 bits (171), Expect = 3.113e-14
Identity = 34/37 (91.89%), Postives = 37/37 (100.00%), Query Frame = 3

Query:  564 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 674
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIP
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIP 37

HSP 4 Score: 26.9498 bits (58), Expect = 3.113e-14
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 2

Query:  680 QQRLIFAGKQLE 715
            QQRLIFAGKQLE
Sbjct:   40 QQRLIFAGKQLE 51

[Close]

BLAST of CX296496 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 3.412e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 2 Score: 145.206 bits (365), Expect = 3.412e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 563
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 3 Score: 70.8626 bits (172), Expect = 2.396e-14
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 3

Query:  564 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 674
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIP
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 37

HSP 4 Score: 26.9498 bits (58), Expect = 2.396e-14
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 2

Query:  680 QQRLIFAGKQLE 715
            QQRLIFAGKQLE
Sbjct:   40 QQRLIFAGKQLE 51

[Close]

BLAST of CX296496 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 4.456e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.821 bits (364), Expect = 4.456e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 563
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 69.707 bits (169), Expect = 5.257e-14
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 3

Query:  564 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 674
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIP
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIP 37

HSP 4 Score: 26.9498 bits (58), Expect = 5.257e-14
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 2

Query:  680 QQRLIFAGKQLE 715
            QQRLIFAGKQLE
Sbjct:   40 QQRLIFAGKQLE 51

[Close]

BLAST of CX296496 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 563
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 70.0922 bits (170), Expect = 1.395e-11
Identity = 39/57 (68.42%), Postives = 43/57 (75.44%), Query Frame = 3

Query:  564 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPQTSRG*SLLGNNL-RWKTLA 731
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIP   +     G  L   +TLA
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLA 57

[Close]

BLAST of CX296496 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 563
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 69.3218 bits (168), Expect = 6.832e-14
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 3

Query:  564 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 674
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIP
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIP 37

HSP 4 Score: 26.9498 bits (58), Expect = 6.832e-14
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 2

Query:  680 QQRLIFAGKQLE 715
            QQRLIFAGKQLE
Sbjct:   40 QQRLIFAGKQLE 51

[Close]

BLAST of CX296496 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 563
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 69.3218 bits (168), Expect = 6.820e-14
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 3

Query:  564 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 674
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIP
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIP 37

HSP 4 Score: 26.9498 bits (58), Expect = 6.820e-14
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 2

Query:  680 QQRLIFAGKQLE 715
            QQRLIFAGKQLE
Sbjct:   40 QQRLIFAGKQLE 51

[Close]

BLAST of CX296496 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 5.820e-34
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 563
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 69.3218 bits (168), Expect = 6.832e-14
Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 3

Query:  564 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 674
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIP
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIP 37

HSP 4 Score: 26.9498 bits (58), Expect = 6.832e-14
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 2

Query:  680 QQRLIFAGKQLE 715
            QQRLIFAGKQLE
Sbjct:   40 QQRLIFAGKQLE 51

[Close]

BLAST of CX296496 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.693e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  108 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 335
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 1.693e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  336 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 563
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 67.781 bits (164), Expect = 1.947e-13
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 3

Query:  564 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIP 674
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIP
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIP 37

HSP 4 Score: 26.9498 bits (58), Expect = 1.947e-13
Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 2

Query:  680 QQRLIFAGKQLE 715
            QQRLIFAGKQLE
Sbjct:   40 QQRLIFAGKQLE 51

The following BLAST results are available for this feature:

BLAST of CX296496 vs. ExPASy Swiss-Prot

BLAST of CX296496 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_CAMDR	2.000e-34	96.05	Ubiquitin OS=Camelus dromedarius PE=3 SV=2	[more]
UBIQ_BOVIN	2.000e-34	96.05	Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1	[more]
UBIQ_TETPY	2.613e-34	94.74	Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ...	[more]
UBIQ_SHEEP	3.412e-34	94.74	Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2	[more]
UBIQ_EIMBO	4.456e-34	94.74	Ubiquitin OS=Eimeria bovis PE=2 SV=1	[more]
UBIQ_TRYBB	5.820e-34	94.74	Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1	[more]
UBIQ_STRPU	5.820e-34	94.74	Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV...	[more]
UBIQ_ENCCU	5.820e-34	94.74	Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074...	[more]
UBIQ_DICDI	5.820e-34	94.74	Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1...	[more]
UBIQ_PHYIN	1.693e-33	93.42	Ubiquitin OS=Phytophthora infestans PE=1 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	C05141H04SK FerrChloL1 Citrus clementina cDNA clone C05141H04, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CX296496 ID=CX296496; Name=CX296496; organism=Citrus clementina; type=EST; length=732bp
ACGAGGCTCATCTTTGCCGGTAAAAACTAGAGGATGGACGCACACTTGCA
GACTACAACATCCAGAAGGAATCAACCCTTCATTTGGTCCTCCGTCTCAG
GGGTGGCATGCAGATTTTTGTGAAAACCCTGACTGGTAAGACTATAACTT
TGGAGGTTGAAAGCTCTGACACGATCGACAATGTCAAGGCCAAGATACAG
GACAAGGAGGGCATCCCACCTGATCAACAGAGGTTAATCTTTGCCGGCAA
ACAACTTGAAGATGGTCGTACTCTTGCTGACTACAACATCCAGAAGGAGT
CAACCCTCCATTTGGTGCTTCGTCTCCGTGGTGGCATGCAGATCTTTGTG
AAAACCCTCACCGGAAAAACAATTACTCTTGAGGTTGAAAGTTCTGACAC
CATCGACAACGTGAAAGCAAAAATTCAGGACAAGGAGGGTATCCCACCAG
ATCAGCAGAGGCTCATTTTTGCTGGAAAGCAGCTTGAAGATGGAAGGACT
CTTGCAGACTATAACATCCAGAAAGAATCCACTCTTCACTTGGTTCTTCG
CCTCCGTGGTGGTATGCAGATTTTTGTGAAGACACTCACTGGGAAAACCA
TCACATTGGAGGTTGAGAGTTCGGACACAATTGACAATGTGAAGGCTAAG
ATCCAGGATAAGGAGGGGATTCCCCAGACCAGCAGAGGTTGATCTTTGCT
GGGAAACAACTTGAGATGGAAGACTCTTGCTG