CX296506
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS2_PETHY (Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic OS=Petunia hybrida GN=RBCS PE=3 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 5.642e-71 Identity = 115/160 (71.88%), Postives = 137/160 (85.62%), Query Frame = 1 Query: 40 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519 MASS++SSA VAT+ A AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRVQCM+VWPP G KK+ETLSYLP L+DE LLKEI YL+ GW+PCLEFE E G+VYRE+H SP YYDGRYWTMWKLPM+GCTDATQVL E+ E +K YP++++RI Sbjct: 1 MASSVMSSAAVATSTNA--AQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVQCMQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVYREYHASPRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRI 158 HSP 2 Score: 42.743 bits (99), Expect = 5.642e-71 Identity = 19/21 (90.48%), Postives = 19/21 (90.48%), Query Frame = 2 Query: 521 IGFDNKRQVQCISFIAAKPPG 583 IGFDN RQVQCISFIA KPPG Sbjct: 159 IGFDNVRQVQCISFIAYKPPG 179
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS1_SOLLC (Ribulose bisphosphate carboxylase small chain 1, chloroplastic OS=Solanum lycopersicum GN=RBCS-1 PE=2 SV=2) HSP 1 Score: 247.669 bits (631), Expect = 7.359e-71 Identity = 116/161 (72.05%), Postives = 141/161 (87.58%), Query Frame = 1 Query: 40 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNN-DITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519 MASS++SSA AT R+++AQASMVAPFTGLKS+++FP TKK NN DITS+ASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEFE E+G+VYRE++ SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP ++VRI Sbjct: 1 MASSIVSSAAAAT--RSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETERGFVYRENNSSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRI 159 HSP 2 Score: 39.6614 bits (91), Expect = 7.359e-71 Identity = 18/21 (85.71%), Postives = 18/21 (85.71%), Query Frame = 2 Query: 521 IGFDNKRQVQCISFIAAKPPG 583 IGFDN RQVQCISFIA KP G Sbjct: 160 IGFDNVRQVQCISFIAYKPEG 180
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS1B_ARATH (Ribulose bisphosphate carboxylase small chain 1B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1B PE=1 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 7.359e-71 Identity = 116/160 (72.50%), Postives = 134/160 (83.75%), Query Frame = 1 Query: 40 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519 MASSM+SSA V T S AQA+MVAPFTGLKSS++FP T+K NNDITSI SNGGRV CMKVWPP G KKFETLSYLP L+D L KE+ YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ QVLKEV E +KEYP +F+RI Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRI 156 HSP 2 Score: 40.817 bits (94), Expect = 7.359e-71 Identity = 18/20 (90.00%), Postives = 18/20 (90.00%), Query Frame = 2 Query: 521 IGFDNKRQVQCISFIAAKPP 580 IGFDN RQVQCISFIA KPP Sbjct: 157 IGFDNTRQVQCISFIAYKPP 176
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS3A_SOLLC (Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic OS=Solanum lycopersicum GN=RBCS-3A/3C PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 9.597e-71 Identity = 116/160 (72.50%), Postives = 138/160 (86.25%), Query Frame = 1 Query: 40 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519 MASS++SSA VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV CM+VWPP +KK+ETLSYLP LSDE LL EI YL+++GW+PCLEFE E G+VYRE+H+SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP ++VRI Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVYRENHKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRI 158 HSP 2 Score: 39.6614 bits (91), Expect = 9.597e-71 Identity = 18/21 (85.71%), Postives = 18/21 (85.71%), Query Frame = 2 Query: 521 IGFDNKRQVQCISFIAAKPPG 583 IGFDN RQVQCISFIA KP G Sbjct: 159 IGFDNVRQVQCISFIAYKPEG 179
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBSB_SOLTU (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Solanum tuberosum GN=RBCS-2B PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.252e-70 Identity = 114/160 (71.25%), Postives = 140/160 (87.50%), Query Frame = 1 Query: 40 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519 MASS++SSA VAT RA+ AQASMV PFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+VYRE+++SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RI Sbjct: 1 MASSIVSSAAVAT--RANGAQASMVGPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRI 158 HSP 2 Score: 39.6614 bits (91), Expect = 1.252e-70 Identity = 18/21 (85.71%), Postives = 18/21 (85.71%), Query Frame = 2 Query: 521 IGFDNKRQVQCISFIAAKPPG 583 IGFDN RQVQCISFIA KP G Sbjct: 159 IGFDNVRQVQCISFIAYKPEG 179
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS2_BRANA (Ribulose bisphosphate carboxylase small chain F1, chloroplastic OS=Brassica napus GN=RBCS F1 PE=3 SV=1) HSP 1 Score: 245.358 bits (625), Expect = 1.252e-70 Identity = 116/160 (72.50%), Postives = 135/160 (84.38%), Query Frame = 1 Query: 40 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519 MASSM+SSA V T S AQA+MVAPFTGLKSS+AFP T+K NNDITSIASNGGRV CMKVWPP G KKFETLSYLP L++ L KE+ YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ QVLKEV E + EYP++F+RI Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWPPVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRI 156 HSP 2 Score: 41.2022 bits (95), Expect = 1.252e-70 Identity = 18/20 (90.00%), Postives = 18/20 (90.00%), Query Frame = 2 Query: 521 IGFDNKRQVQCISFIAAKPP 580 IGFDN RQVQCISFIA KPP Sbjct: 157 IGFDNNRQVQCISFIAYKPP 176
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS2B_ARATH (Ribulose bisphosphate carboxylase small chain 2B, chloroplastic OS=Arabidopsis thaliana GN=RBCS-2B PE=2 SV=2) HSP 1 Score: 245.358 bits (625), Expect = 1.632e-70 Identity = 116/160 (72.50%), Postives = 132/160 (82.50%), Query Frame = 1 Query: 40 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519 MASSM SS V T S AQA+MVAPFTGLKSS++FP T+K NNDITSI SNGGRV CMKVWPP G KKFETLSYLP LSD L KE+ YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ QVLKEV E +KEYP +F+RI Sbjct: 1 MASSMFSSTAVVT----SPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRI 156 HSP 2 Score: 40.817 bits (94), Expect = 1.632e-70 Identity = 18/20 (90.00%), Postives = 18/20 (90.00%), Query Frame = 2 Query: 521 IGFDNKRQVQCISFIAAKPP 580 IGFDN RQVQCISFIA KPP Sbjct: 157 IGFDNTRQVQCISFIAYKPP 176
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS1_BRANA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Brassica napus GN=RBCS PE=2 SV=2) HSP 1 Score: 244.973 bits (624), Expect = 1.632e-70 Identity = 116/160 (72.50%), Postives = 134/160 (83.75%), Query Frame = 1 Query: 40 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519 MASSM+SSA V T S AQA+MVAPFTGLKSSSAFP T+K NNDITSI SNGGRV CMKVWPP G KKFETLSYLP L++ L KE+ YL+R+ WIPC+EFELE G+VYREH +PGYYDGRYWTMWKLP++GCTD+ QVLKEV E + EYP++F+RI Sbjct: 1 MASSMLSSAAVVT----SPAQATMVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRI 156 HSP 2 Score: 41.2022 bits (95), Expect = 1.632e-70 Identity = 18/20 (90.00%), Postives = 18/20 (90.00%), Query Frame = 2 Query: 521 IGFDNKRQVQCISFIAAKPP 580 IGFDN RQVQCISFIA KPP Sbjct: 157 IGFDNNRQVQCISFIAYKPP 176
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBSC_SOLTU (Ribulose bisphosphate carboxylase small chain 2C, chloroplastic OS=Solanum tuberosum GN=RBCS-2C PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 2.129e-70 Identity = 114/160 (71.25%), Postives = 140/160 (87.50%), Query Frame = 1 Query: 40 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519 MASS++SSA VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+VYRE+++SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RI Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSTASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRI 158 HSP 2 Score: 39.6614 bits (91), Expect = 2.129e-70 Identity = 18/21 (85.71%), Postives = 18/21 (85.71%), Query Frame = 2 Query: 521 IGFDNKRQVQCISFIAAKPPG 583 IGFDN RQVQCISFIA KP G Sbjct: 159 IGFDNVRQVQCISFIAYKPEG 179
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBSA_SOLTU (Ribulose bisphosphate carboxylase small chain 2A, chloroplastic OS=Solanum tuberosum GN=RBCS-2A PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 2.129e-70 Identity = 114/160 (71.25%), Postives = 140/160 (87.50%), Query Frame = 1 Query: 40 MASSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519 MASS++SSA VAT R + AQASMVAPFTGLKS+++FP ++K N DITSIASNGGRV+CM+VWPP +KK+ETLSYLP LSDE LLKE+ YL+++GW+PCLEFE E G+VYRE+++SPGYYDGRYWTMWKLPM+GCTDATQVL EV E +K YP +++RI Sbjct: 1 MASSVMSSAAVAT--RGNGAQASMVAPFTGLKSAASFPVSRKQNLDITSIASNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVYRENNKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRI 158 HSP 2 Score: 39.6614 bits (91), Expect = 2.129e-70 Identity = 18/21 (85.71%), Postives = 18/21 (85.71%), Query Frame = 2 Query: 521 IGFDNKRQVQCISFIAAKPPG 583 IGFDN RQVQCISFIA KP G Sbjct: 159 IGFDNVRQVQCISFIAYKPEG 179 The following BLAST results are available for this feature:
BLAST of CX296506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 120
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296506 ID=CX296506; Name=CX296506; organism=Citrus clementina; type=EST; length=709bpback to top |