CX296506

Overview
NameCX296506
Unique NameCX296506
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS_AEGTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Aegilops tauschii GN=RBCS PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.309e-54
Identity = 86/141 (60.99%), Postives = 110/141 (78.01%), Query Frame = 1
Query:   97 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519
            + A+ VAPF GLKS++  P ++++N       SNGGR++CM+VWP  G+KKFETLSYLPPLS E LLK++ YLIRS W+PCLEF  + G+++REH+ SPGYYDGRYWTMWKLPM+GC   TQV+ EV EV+KEYP  + RI
Sbjct:    8 SSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEGLLKQVDYLIRSKWVPCLEFR-KVGFIFREHNVSPGYYDGRYWTMWKLPMFGCPAPTQVIPEVEEVRKEYPDPYCRI 147          

HSP 2 Score: 40.0466 bits (92), Expect = 1.309e-54
Identity = 17/21 (80.95%), Postives = 19/21 (90.48%), Query Frame = 2
Query:  521 IGFDNKRQVQCISFIAAKPPG 583
            IGFDN RQVQ +SFIA+KPPG
Sbjct:  148 IGFDNMRQVQSVSFIASKPPG 168          
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS_MAIZE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 3.429e-52
Identity = 84/141 (59.57%), Postives = 111/141 (78.72%), Query Frame = 1
Query:   97 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519
            + A+ VAPF GLKS+++ P  ++++  + ++ SNGGR++CM+VWP  G KKFETLSYLPPLS + LLK++ YL+R+GWIPCLEF  + G+VYRE+  SP YYDGRYWTMWKLPM+GC DATQV KE+ E  K YP +F R+
Sbjct:    9 SSATAVAPFQGLKSTASLPVARRSSRSLGNV-SNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFS-KVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEAIKSYPDAFHRV 147          

HSP 2 Score: 39.2762 bits (90), Expect = 3.429e-52
Identity = 16/21 (76.19%), Postives = 18/21 (85.71%), Query Frame = 2
Query:  521 IGFDNKRQVQCISFIAAKPPG 583
            IGFDN +Q QC+SFIA KPPG
Sbjct:  148 IGFDNIKQTQCVSFIAYKPPG 168          
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS_PINTH (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 4.857e-51
Identity = 85/151 (56.29%), Postives = 114/151 (75.50%), Query Frame = 1
Query:   79 ANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITS----IASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519
            A  A    A++V+ FTGLKS++ FP++ K +N          SNGGRV+CM+VWPP G  KFETLSYLP L++E L+KE+ YL+R+ W+PCLEF+LE G + R+++RSPGYYDGRYW MWKLPM+GCT+A+QV+ EV E  K YP +F+R+
Sbjct:    2 ATGAGAGAATVVSAFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLE-GSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRV 151          

HSP 2 Score: 36.1946 bits (82), Expect = 4.857e-51
Identity = 16/19 (84.21%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  521 IGFDNKRQVQCISFIAAKP 577
            IGFDN RQVQCISFI  KP
Sbjct:  152 IGFDNVRQVQCISFIVHKP 170          
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS_LARLA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.370e-49
Identity = 87/168 (51.79%), Postives = 118/168 (70.24%), Query Frame = 1
Query:   40 MASSMIS----SATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITS----IASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519
            MASS+++    +A  A A  +    +++V+ FTGLKS + FP++K  +N          SNG RV+CM+VWPP   KKFETLSYLP L+ E L+KE+ YL+++ W+PCLEFE E G + R +  SPGYYDGRYW MWKLPM+GCT+A+QVL EV E  K YP++F+R+
Sbjct:    1 MASSIMALSSTAAVAAVAAPSKTGNSNVVSAFTGLKSMAQFPSSKTMSNAGAEWEQKTTSNGSRVRCMQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFE-EDGEIKRVYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRV 167          

HSP 2 Score: 36.1946 bits (82), Expect = 3.370e-49
Identity = 16/19 (84.21%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  521 IGFDNKRQVQCISFIAAKP 577
            IGFDN RQVQCISFI  KP
Sbjct:  168 IGFDNVRQVQCISFIVHKP 186          
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS1_PEA (Ribulose bisphosphate carboxylase small chain, chloroplastic (Fragment) OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 9.755e-49
Identity = 79/113 (69.91%), Postives = 93/113 (82.30%), Query Frame = 1
Query:  181 TSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519
            T I SNG RV+CM+VWPP G KKFETLSYLPPL+ + LLKE+ YL+R GW+PCLEFEL KG+VY EH++SP YYDGRYWTMWKLPM+G TD  QV+KEV EV   YP +FVR+
Sbjct:    2 TDITSNGERVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELLKGFVYGEHNKSPRYYDGRYWTMWKLPMFGTTDPAQVVKEVDEVVAAYPEAFVRV 114          

HSP 2 Score: 33.4982 bits (75), Expect = 9.755e-49
Identity = 15/19 (78.95%), Postives = 16/19 (84.21%), Query Frame = 2
Query:  521 IGFDNKRQVQCISFIAAKP 577
            IGF+N RQVQCISFIA  P
Sbjct:  115 IGFNNVRQVQCISFIAHTP 133          
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS_SACHY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Saccharum hybrid GN=RBCS PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 3.050e-47
Identity = 79/135 (58.52%), Postives = 103/135 (76.30%), Query Frame = 1
Query:   97 AQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYP 501
            + A+  APF GLKS+++ P  +++   +  + SNGGR++CM+VWP  G KKFETLSYLPPL+ E LLK++ YL+R+ W+PCLEF  E G+VYRE+  SP YYDGRYWTMWKLPM+GCTDA+QV KE+ E    YP
Sbjct:    8 SSATAAAPFQGLKSTASLPVARRSTTSLAKV-SNGGRIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQVDYLLRNNWVPCLEFSKE-GFVYRENSTSPCYYDGRYWTMWKLPMFGCTDASQVYKELQEAIASYP 140          

HSP 2 Score: 30.8018 bits (68), Expect = 3.050e-47
Identity = 13/21 (61.90%), Postives = 16/21 (76.19%), Query Frame = 2
Query:  521 IGFDNKRQVQCISFIAAKPPG 583
            +GFDN RQ Q ++FIA KP G
Sbjct:  146 LGFDNIRQTQWLTFIAYKPAG 166          
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS1_SPIOL (Ribulose bisphosphate carboxylase small chain OS=Spinacia oleracea GN=RBCS PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.467e-43
Identity = 70/100 (70.00%), Postives = 83/100 (83.00%), Query Frame = 1
Query:  217 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVR 516
            M+VWPP GLKKFETLSYLPPL+ E LL E++YL+  GWIP LEFE++ G+VYREH +SPGYYDGRYWTMWKLPM+G TD  QV+ EV EV+K  P +FVR
Sbjct:    1 MQVWPPLGLKKFETLSYLPPLTTEQLLAEVNYLLVKGWIPPLEFEVKDGFVYREHDKSPGYYDGRYWTMWKLPMFGGTDPAQVVNEVEEVKKAPPDAFVR 100          

HSP 2 Score: 39.6614 bits (91), Expect = 1.467e-43
Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 2
Query:  518 FIGFDNKRQVQCISFIAAKPPG 583
            FIGF++KR+VQCISFIA KP G
Sbjct:  101 FIGFNDKREVQCISFIAYKPAG 122          
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS3_WHEAT (Ribulose bisphosphate carboxylase small chain clone 512 (Fragment) OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.866e-40
Identity = 62/86 (72.09%), Postives = 76/86 (88.37%), Query Frame = 1
Query:  262 SYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519
            +YLPPLS EALLK++ YLIRS W+PCLEF  + G+++REH+ SPGYYDGRYWTMWKLPM+GCTDATQV+ EV EV+KEYP ++VRI
Sbjct:    1 AYLPPLSTEALLKQVDYLIRSKWVPCLEFS-KVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVINEVEEVKKEYPDAYVRI 85          

HSP 2 Score: 42.743 bits (99), Expect = 1.866e-40
Identity = 18/21 (85.71%), Postives = 19/21 (90.48%), Query Frame = 2
Query:  521 IGFDNKRQVQCISFIAAKPPG 583
            IGFDN RQVQC+SFIA KPPG
Sbjct:   86 IGFDNMRQVQCVSFIAFKPPG 106          
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS_MARPA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.971e-40
Identity = 73/151 (48.34%), Postives = 98/151 (64.90%), Query Frame = 1
Query:   46 SSMISSATVATANRASLAQASMVAPFTGLKSSSAFPATKKTNNDITSIASNGGRVQCMKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFELEKGWVYREHHRSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEY 498
            +S+++SA V T   AS A  +  +    +++          +   T   +NG RV CM+VW P    KFETLSYLPPLS +AL K+I Y+I+SGW PC+EF+++ G V RE    PGYYDGRYWTMWKLPM+GCTD+  VL+E+ E +K Y
Sbjct:    2 ASVVASAAVVTPFAASAASTTKSSQIVSVQAGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQ-GTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLY 151          

HSP 2 Score: 32.3426 bits (72), Expect = 6.971e-40
Identity = 13/19 (68.42%), Postives = 15/19 (78.95%), Query Frame = 2
Query:  521 IGFDNKRQVQCISFIAAKP 577
            +GFDN RQVQC SFI  +P
Sbjct:  160 LGFDNTRQVQCASFIVHQP 178          
BLAST of CX296506 vs. ExPASy Swiss-Prot
Match: RBS_EUGGR (Ribulose bisphosphate carboxylase small chains, chloroplastic OS=Euglena gracilis GN=RBCS1 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 5.452e-29
Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = 1
Query:  217 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFEL-EKGWVYREHH-----RSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519
            MKVW P   KKFET SYLPPLSD  + K++  +I  G  PCLEF   E  ++  ++       + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP  +VR+
Sbjct:  854 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL 960          

HSP 2 Score: 26.9498 bits (58), Expect = 5.452e-29
Identity = 10/21 (47.62%), Postives = 15/21 (71.43%), Query Frame = 2
Query:  521 IGFDNKRQVQCISFIAAKPPG 583
            + FD+ +QVQ ISF+  +P G
Sbjct:  960 LAFDSVKQVQVISFVVQRPSG 980          

HSP 3 Score: 120.168 bits (300), Expect = 9.240e-29
Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = 1
Query:  217 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFEL-EKGWVYREHH-----RSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519
            MKVW P   KKFET SYLPPLSD  + K++  +I  G  PCLEF   E  ++  ++       + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP  +VR+
Sbjct:  135 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL 241          

HSP 4 Score: 120.168 bits (300), Expect = 9.240e-29
Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = 1
Query:  217 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFEL-EKGWVYREHH-----RSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519
            MKVW P   KKFET SYLPPLSD  + K++  +I  G  PCLEF   E  ++  ++       + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP  +VR+
Sbjct:  279 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL 385          

HSP 5 Score: 120.168 bits (300), Expect = 9.240e-29
Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = 1
Query:  217 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFEL-EKGWVYREHH-----RSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519
            MKVW P   KKFET SYLPPLSD  + K++  +I  G  PCLEF   E  ++  ++       + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP  +VR+
Sbjct:  566 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL 672          

HSP 6 Score: 120.168 bits (300), Expect = 9.240e-29
Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = 1
Query:  217 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFEL-EKGWVYREHH-----RSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519
            MKVW P   KKFET SYLPPLSD  + K++  +I  G  PCLEF   E  ++  ++       + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP  +VR+
Sbjct:  709 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL 815          

HSP 7 Score: 120.168 bits (300), Expect = 9.240e-29
Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = 1
Query:  217 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFEL-EKGWVYREHH-----RSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519
            MKVW P   KKFET SYLPPLSD  + K++  +I  G  PCLEF   E  ++  ++       + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP  +VR+
Sbjct:  997 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL 1103          

HSP 8 Score: 26.1794 bits (56), Expect = 9.240e-29
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  527 FDNKRQVQCISFIAAKPPG 583
            FD+ +QVQ ISF+  +P G
Sbjct:  244 FDSVKQVQVISFVVQRPSG 262          

HSP 9 Score: 26.1794 bits (56), Expect = 9.240e-29
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  527 FDNKRQVQCISFIAAKPPG 583
            FD+ +QVQ ISF+  +P G
Sbjct:  388 FDSVKQVQVISFVVQRPSG 406          

HSP 10 Score: 26.1794 bits (56), Expect = 9.240e-29
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  527 FDNKRQVQCISFIAAKPPG 583
            FD+ +QVQ ISF+  +P G
Sbjct:  675 FDSVKQVQVISFVVQRPSG 693          

HSP 11 Score: 26.1794 bits (56), Expect = 9.240e-29
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  527 FDNKRQVQCISFIAAKPPG 583
            FD+ +QVQ ISF+  +P G
Sbjct:  818 FDSVKQVQVISFVVQRPSG 836          

HSP 12 Score: 26.1794 bits (56), Expect = 9.240e-29
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  527 FDNKRQVQCISFIAAKPPG 583
            FD+ +QVQ ISF+  +P G
Sbjct: 1106 FDSVKQVQVISFVVQRPSG 1124          

HSP 13 Score: 120.168 bits (300), Expect = 3.455e-28
Identity = 55/107 (51.40%), Postives = 72/107 (67.29%), Query Frame = 1
Query:  217 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFEL-EKGWVYREHH-----RSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519
            MKVW P   KKFET SYLPPLSD  + K++  +I  G  PCLEF   E  ++  ++       + GYYD RYWTMWKLPM+GCTDA+QVL+E+ E ++ YP  +VR+
Sbjct: 1141 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL 1247          

HSP 14 Score: 118.242 bits (295), Expect = 3.455e-28
Identity = 54/107 (50.47%), Postives = 71/107 (66.36%), Query Frame = 1
Query:  217 MKVWPPTGLKKFETLSYLPPLSDEALLKEISYLIRSGWIPCLEFEL-EKGWVYREHH-----RSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 519
            MKVW P   KKFET SYLPPLSD  + K++  +I  G  PCLEF   E  ++  ++       + GYYD  YWTMWKLPM+GCTDA+QVL+E+ E ++ YP  +VR+
Sbjct:  422 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNHYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL 528          

HSP 15 Score: 26.1794 bits (56), Expect = 3.455e-28
Identity = 10/19 (52.63%), Postives = 14/19 (73.68%), Query Frame = 2
Query:  527 FDNKRQVQCISFIAAKPPG 583
            FD+ +QVQ ISF+  +P G
Sbjct:  531 FDSVKQVQVISFVVQRPSG 549          

HSP 16 Score: 24.2534 bits (51), Expect = 3.455e-28
Identity = 9/17 (52.94%), Postives = 13/17 (76.47%), Query Frame = 2
Query:  527 FDNKRQVQCISFIAAKP 577
            FD+ +QVQ ISF+  +P
Sbjct: 1250 FDSVKQVQVISFVVQRP 1266          
The following BLAST results are available for this feature:
BLAST of CX296506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 120
Match NameE-valueIdentityDescription
RBS_AEGTA1.309e-5460.99Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_MAIZE3.429e-5259.57Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_PINTH4.857e-5156.29Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_LARLA3.370e-4951.79Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS1_PEA9.755e-4969.91Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_SACHY3.050e-4758.52Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS1_SPIOL1.467e-4370.00Ribulose bisphosphate carboxylase small chain OS=S... [more]
RBS3_WHEAT1.866e-4072.09Ribulose bisphosphate carboxylase small chain clon... [more]
RBS_MARPA6.971e-4048.34Ribulose bisphosphate carboxylase small chain, chl... [more]
RBS_EUGGR5.452e-2951.40Ribulose bisphosphate carboxylase small chains, ch... [more]

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Properties
Property NameValue
Genbank descriptionC05142A05SK FerrChloL1 Citrus clementina cDNA clone C05142A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296506 ID=CX296506; Name=CX296506; organism=Citrus clementina; type=EST; length=709bp
GAGGCCTCGTGCCGAATTCGGCACGAGGAGCAAGTACCAATGGCTTCCTC
AATGATCTCATCGGCCACCGTTGCCACCGCGAACCGCGCCAGCCTTGCTC
AGGCCAGCATGGTCGCCCCCTTCACCGGCCTCAAGTCTTCTTCTGCTTTC
CCAGCAACCAAGAAGACCAACAATGACATTACTTCCATTGCAAGCAACGG
CGGAAGAGTCCAATGCATGAAGGTGTGGCCACCAACTGGCTTGAAGAAGT
TCGAGACTCTCTCATACCTCCCGCCACTGTCCGATGAAGCTTTGCTCAAG
GAAATCAGTTACCTTATCCGCTCCGGCTGGATTCCCTGCTTGGAATTCGA
GTTGGAGAAAGGATGGGTGTACCGTGAGCACCACAGGTCACCAGGATACT
ACGATGGACGCTACTGGACAATGTGGAAGCTGCCCATGTATGGGTGCACA
GATGCAACCCAGGTTTTGAAGGAGGTTGGGGAGGTCCAGAAGGAATACCC
ACATTCATTCGTCCGAATTTATCGGATTTGACAACAAGCGTCAAGTGCAG
TGCATCAGTTTCATTGCTGCCAAGCCACCAGGCGTCTAGGTTCCCAATTA
AATTTGTGTAACCACCCATGCAATATTGTTGATTATTATTATGTGTAACC
CCCATAATGATCATTCGATCAATGGGGGTTCGGTTTGCGTTTAATTTGTA
CTTAGGCTG
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