CX296509

Overview
NameCX296509
Unique NameCX296509
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length663
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: DYN1_CAEEL (Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV=3)

HSP 1 Score: 194.126 bits (492), Expect = 5.385e-49
Identity = 105/222 (47.30%), Postives = 145/222 (65.32%), Query Frame = 1
Query:    4 ADTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLADRCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGA-LLLNILSKYSEAFSXMVEGKNEEM-STSELSGGARIHYIFQSIF 663
            AD E +IR MI+++I + +CLILAVTPANSDLA SDAL++A   DP G RTIG++TKLD+MD GTDAR +L  K+  LR GYVGVVNR Q+DI+  + I+ AL AE KFF S P Y  +ADR G   L   LNQ L  HI+  LP L+  +   + ++ K+ A Y     +  G+    LL ++++++      +EG + ++ ST+ELSGGARI+ +F   F
Sbjct:  152 ADIEQQIRDMILTFINRETCLILAVTPANSDLATSDALKLAKEVDPQGLRTIGVLTKLDLMDEGTDAREILENKLFTLRRGYVGVVNRGQKDIVGRKDIRAALDAERKFFISHPSYRHMADRLGTSYLQHTLNQQLTNHIRDTLPTLRDSLQKKMFAMEKDVAEYKNYQPNDPGRKTKALLQMVTQFNADIERSIEGSSAKLVSTNELSGGARINRLFHERF 373          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: DNM1L_DANRE (Dynamin-1-like protein OS=Danio rerio GN=dnm1l PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.501e-46
Identity = 98/219 (44.75%), Postives = 144/219 (65.75%), Query Frame = 1
Query:    7 DTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLADRCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGALLLNILSKYSEAFSXMVEGKNEEMSTSELSGGARIHYIFQSIF 663
            D E +IR +I+ YI  P+ +ILAVT AN+D+A S+AL++A   DPDG RT+ ++TKLD+MD GTDA ++L+G+VIP++LG +GVVNRSQ DI   +S+ D++  E  F + +  Y  LA+R G   LA+ LN++L+ HI+  LP LK+RI+          +SYGE  E      A LL +++K++  +   +EG  + + T+EL GGARI YIF   F
Sbjct:  160 DIELQIRELILKYISNPNSIILAVTAANTDMATSEALKVAREVDPDGRRTLAVVTKLDLMDAGTDAMDVLMGRVIPVKLGLIGVVNRSQLDINNKKSVADSIRDEHGFLQKK--YPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLSAQYQSLLSSYGEPVED---MSATLLQLITKFATEYCNTIEGTAKYIETAELCGGARICYIFHETF 373          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: DNM1L_RAT (Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm1l PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.573e-46
Identity = 99/219 (45.21%), Postives = 145/219 (66.21%), Query Frame = 1
Query:    7 DTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLADRCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGALLLNILSKYSEAFSXMVEGKNEEMSTSELSGGARIHYIFQSIF 663
            D E +IR +I+ +I  P+ +ILAVT AN+D+A S+AL+I+   DPDG RT+ +ITKLD+MD GTDA ++L+G+VIP++LG +GVVNRSQ DI   +S+ D++  E  F + +  Y  LA+R G   LA+ LN++L+ HI+  LP LK+RI+           SYGE  + K+   A LL +++K++  +   +EG  + + TSEL GGARI YIF   F
Sbjct:  174 DIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRDEYAFLQKK--YPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKS---ATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETF 387          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: DNM1L_MOUSE (Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 5.573e-46
Identity = 99/219 (45.21%), Postives = 145/219 (66.21%), Query Frame = 1
Query:    7 DTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLADRCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGALLLNILSKYSEAFSXMVEGKNEEMSTSELSGGARIHYIFQSIF 663
            D E +IR +I+ +I  P+ +ILAVT AN+D+A S+AL+I+   DPDG RT+ +ITKLD+MD GTDA ++L+G+VIP++LG +GVVNRSQ DI   +S+ D++  E  F + +  Y  LA+R G   LA+ LN++L+ HI+  LP LK+RI+           SYGE  + K+   A LL +++K++  +   +EG  + + TSEL GGARI YIF   F
Sbjct:  167 DIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRDEYAFLQKK--YPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKS---ATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETF 380          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: DNM1L_HUMAN (Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 5.573e-46
Identity = 99/219 (45.21%), Postives = 145/219 (66.21%), Query Frame = 1
Query:    7 DTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLADRCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGALLLNILSKYSEAFSXMVEGKNEEMSTSELSGGARIHYIFQSIF 663
            D E +IR +I+ +I  P+ +ILAVT AN+D+A S+AL+I+   DPDG RT+ +ITKLD+MD GTDA ++L+G+VIP++LG +GVVNRSQ DI   +S+ D++  E  F + +  Y  LA+R G   LA+ LN++L+ HI+  LP LK+RI+           SYGE  + K+   A LL +++K++  +   +EG  + + TSEL GGARI YIF   F
Sbjct:  161 DIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRDEYAFLQKK--YPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKS---ATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETF 374          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: DNM1L_BOVIN (Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.573e-46
Identity = 99/219 (45.21%), Postives = 145/219 (66.21%), Query Frame = 1
Query:    7 DTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLADRCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGALLLNILSKYSEAFSXMVEGKNEEMSTSELSGGARIHYIFQSIF 663
            D E +IR +I+ +I  P+ +ILAVT AN+D+A S+AL+I+   DPDG RT+ +ITKLD+MD GTDA ++L+G+VIP++LG +GVVNRSQ DI   +S+ D++  E  F + +  Y  LA+R G   LA+ LN++L+ HI+  LP LK+RI+           SYGE  + K+   A LL +++K++  +   +EG  + + TSEL GGARI YIF   F
Sbjct:  174 DIELQIRELILRFISNPNSIILAVTAANTDMATSEALKISREVDPDGRRTLAVITKLDLMDAGTDAMDVLMGRVIPVKLGIIGVVNRSQLDINNKKSVTDSIRDEYAFLQKK--YPSLANRNGTKYLARTLNRLLMHHIRDCLPELKTRINVLAAQYQSLLNSYGEPVDDKS---ATLLQLITKFATEYCNTIEGTAKYIETSELCGGARICYIFHETF 387          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: SDLCA_SOYBN (Dynamin-related protein 12A OS=Glycine max PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.549e-35
Identity = 83/214 (38.79%), Postives = 130/214 (60.75%), Query Frame = 1
Query:   22 IRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLADRCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGAL--LLNILSKYSEAFSXMVEGKNEEMSTSELSGGARIHYIFQS 657
            I  M+ SYI++P+C+ILA++PAN DLA SDA++I+   DP G RTIG++TK+D+MD+GTDA ++L G+   L+  ++GVVNRSQ+DI  N  +  A   E ++F S P Y  LA+R G   LAK L++ L   IK+ +PG++S I+  +  +  E    G+   + AG G L  ++ I   + + F   ++G           GG +I+ +F +
Sbjct:  162 IEDMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPTGDRTIGVLTKIDLMDKGTDAVDILEGRAYRLKFPWIGVVNRSQQDINKNVDMIAARRREREYFNSTPEYKHLANRMGSEHLAKMLSKHLETVIKSKIPGIQSLINKTIAELEAELTRLGKPVAADAG-GKLYAIMEICRSFDQIFKDHLDGVR--------PGGDKIYNVFDN 366          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: SDL5A_SOYBN (Dynamin-related protein 5A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.549e-35
Identity = 83/214 (38.79%), Postives = 130/214 (60.75%), Query Frame = 1
Query:   22 IRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLADRCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQGAL--LLNILSKYSEAFSXMVEGKNEEMSTSELSGGARIHYIFQS 657
            I  M+ SYI++P+C+ILA++PAN DLA SDA++I+   DP G RTIG++TK+D+MD+GTDA ++L G+   L+  ++GVVNRSQ+DI  N  +  A   E ++F S P Y  LA+R G   LAK L++ L   IK+ +PG++S I+  +  +  E    G+   + AG G L  ++ I   + + F   ++G           GG +I+ +F +
Sbjct:  162 IEDMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPTGDRTIGVLTKIDLMDKGTDAVDILEGRAYRLKFPWIGVVNRSQQDINKNVDMIAARRREREYFNSTPEYKHLANRMGSEHLAKMLSKHLETVIKSKIPGIQSLINKTIAELEAELTRLGKPVAADAG-GKLYAIMEICRSFDQIFKDHLDGVR--------PGGDKIYNVFDN 366          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: DRP1A_ARATH (Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3)

HSP 1 Score: 140.198 bits (352), Expect = 9.228e-33
Identity = 77/213 (36.15%), Postives = 128/213 (60.09%), Query Frame = 1
Query:   22 IRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLADRCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGE-ITESKAGQGALLLNILSKYSEAFSXMVEGKNEEMSTSELSGGARIHYIFQS 657
            I  M+ SYI++P+C+ILA++PAN DLA SDA++I+   DP G RT G++TK+D+MD+GTDA  +L G+   L+  +VGVVNRSQ DI  N  +  A   E ++F +   Y  LA++ G   LAK L++ L + IK+ +PG++S I+  ++ +  E +  G+ I     G+   ++ I   + + F   ++G          +GG +++ +F +
Sbjct:  162 IENMVRSYIEKPNCIILAISPANQDLATSDAIKISREVDPSGDRTFGVLTKIDLMDKGTDAVEILEGRSFKLKYPWVGVVNRSQADINKNVDMIAARKREREYFSNTTEYRHLANKMGSEHLAKMLSKHLERVIKSRIPGIQSLINKTVLELETELSRLGKPIAADAGGKLYSIMEICRLFDQIFKEHLDGVR--------AGGEKVYNVFDN 366          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: DRP1B_ARATH (Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.056e-32
Identity = 78/215 (36.28%), Postives = 128/215 (59.53%), Query Frame = 1
Query:   22 IRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLADRCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGE-ITESKAGQGALLLNILSKYSEAFSXMVEGKNEEMSTSELSGGARIHYIFQSIF 663
            I  M+ S+I++P+C+ILA++PAN DLA SDA++I+   DP G RT G++TK+D+MD+GT+A ++L G+   LR  +VGVVNRSQ DI  +  +  A   E  +F++ P Y  L +R G   L K L++ L   IK+ +PGL+S I+  +  +  E +  G+ +     G+  +++ I   + + F   ++G          SGG +I+ +F + F
Sbjct:  162 IENMVRSFIEKPNCIILAISPANQDLATSDAIKISREVDPKGDRTFGVLTKIDLMDQGTNAVDILEGRGYKLRYPWVGVVNRSQADINKSVDMIAARRRERDYFQTSPEYRHLTERMGSEYLGKMLSKHLEVVIKSRIPGLQSLITKTISELETELSRLGKPVAADAGGKLYMIMEICRAFDQTFKEHLDGTR--------SGGEKINSVFDNQF 368          
The following BLAST results are available for this feature:
BLAST of CX296509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
DYN1_CAEEL5.385e-4947.30Dynamin OS=Caenorhabditis elegans GN=dyn-1 PE=1 SV... [more]
DNM1L_DANRE2.501e-4644.75Dynamin-1-like protein OS=Danio rerio GN=dnm1l PE=... [more]
DNM1L_RAT5.573e-4645.21Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm... [more]
DNM1L_MOUSE5.573e-4645.21Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE... [more]
DNM1L_HUMAN5.573e-4645.21Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE... [more]
DNM1L_BOVIN5.573e-4645.21Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2... [more]
SDLCA_SOYBN7.549e-3538.79Dynamin-related protein 12A OS=Glycine max PE=1 SV... [more]
SDL5A_SOYBN7.549e-3538.79Dynamin-related protein 5A OS=Glycine max PE=2 SV=... [more]
DRP1A_ARATH9.228e-3336.15Dynamin-related protein 1A OS=Arabidopsis thaliana... [more]
DRP1B_ARATH2.056e-3236.28Dynamin-related protein 1B OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionC05142A12SK FerrChloL1 Citrus clementina cDNA clone C05142A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296509 ID=CX296509; Name=CX296509; organism=Citrus clementina; type=EST; length=663bp
GAGGCTGATACTGAAGCACGAATTAGAACGATGATTATGTCATATATCAA
GCAACCAAGTTGTCTAATTCTTGCAGTTACACCGGCAAATTCAGATTTGG
CAAACTCAGATGCCCTTCAAATTGCTGGAATTGCTGATCCGGATGGTTAT
AGAACCATAGGCATAATCACAAAGTTGGATATTATGGACAGAGGTACTGA
TGCCCGTAATTTGTTACTCGGAAAAGTGATTCCGCTTCGGCTTGGTTATG
TTGGTGTTGTGAATAGGAGTCAGGAGGATATTATGTTCAACCGGAGTATC
AAGGATGCACTAGTGGCTGAGGAAAAGTTCTTCCGTAGTCGCCCTGTATA
TAATGGTCTAGCAGATCGTTGTGGTGTTCCTCAGTTGGCAAAGAAGTTGA
ACCAGATTCTTGTACAACATATCAAGGCTATACTTCCTGGGTTGAAGTCA
CGCATTAGCTCTGCATTAGTTTCTGTTGCAAAGGAGCATGCAAGCTACGG
GGAAATCACAGAATCAAAGGCTGGTCAGGGAGCTCTACTCCTGAATATTC
TTTCTAAATACTCCGAAGCATTTTCTTNCATGGTGGAGGGAAAGAATGAA
GAAATGTCAACATCTGAGCTTTCTGGCGGGGCACGAATTCACTATATTTT
TCAGTCAATCTTT
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