CX296509
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: DRP1D_ARATH (Dynamin-related protein 1D OS=Arabidopsis thaliana GN=DRP1D PE=2 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 7.812e-32 Identity = 79/211 (37.44%), Postives = 126/211 (59.72%), Query Frame = 1 Query: 22 IRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLADRCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAG-QGALLLNILSKYSEAFSXMVEGKNEEMSTSELSGGARIHYIF 651 I +M+ SY+++P+CLILA++PAN D+A SDA+++A DP G RT G++TKLD+MD+GT+A +++ G+ L+ +VG+VNRSQ DI N + A E ++F + P Y LA R G LAK L+++L I++ +P + S I++ + + +E G AG Q +L + + + F ++G GGARI+ IF Sbjct: 163 IESMVRSYVEKPNCLILAISPANQDIATSDAMKLAKEVDPIGDRTFGVLTKLDLMDKGTNALDVINGRSYKLKYPWVGIVNRSQADINKNVDMMVARRKEREYFETSPDYGHLATRMGSEYLAKLLSKLLESVIRSRIPSILSLINNNIEELERELDQLGRPIAIDAGAQLYTILGMCRAFEKIFKEHLDGGR--------PGGARIYGIF 365
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: DRP1C_ARATH (Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.629e-29 Identity = 76/211 (36.02%), Postives = 117/211 (55.45%), Query Frame = 1 Query: 22 IRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLADRCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGE-ITESKAGQGALLLNILSKYSEAFSXMVEGKNEEMSTSELSGGARIHYIF 651 I M+ SY+++P+C+ILA++PAN D+A SDA+++A DP G RT G+ TKLDIMD+GTD ++L G+ L+ +VG+VNRSQ DI + A E+++F + P Y LA R G LAK L+Q L I+ +P + + I+ ++ + E G I Q +L + + F ++G GG RI+ +F Sbjct: 163 IENMVRSYVEKPNCIILAISPANQDIATSDAIKLAREVDPTGERTFGVATKLDIMDKGTDCLDVLEGRSYRLQHPWVGIVNRSQADINKRVDMIAARRKEQEYFETSPEYGHLASRMGSEYLAKLLSQHLETVIRQKIPSIVALINKSIDEINAELDRIGRPIAVDSGAQLYTILELCRAFDRVFKEHLDGGR--------PGGDRIYGVF 365
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: DRP1E_ARATH (Dynamin-related protein 1E OS=Arabidopsis thaliana GN=DRP1E PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.779e-29 Identity = 75/213 (35.21%), Postives = 122/213 (57.28%), Query Frame = 1 Query: 22 IRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLADRCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAG-QGALLLNILSKYSEAFSXMVEGKNEEMSTSELSGGARIHYIFQS 657 I +M+ +Y+ +P+C+ILA++PAN D+A SDA+++A DP G RT G++TKLD+MD+GT+A +L G+ L+ +VG+VNRSQ DI N + A E ++F + P Y LA + G LAK L++ L I+ +P + S I+ ++ + +E G AG Q +L + + + F ++G GG RI+ +F + Sbjct: 168 IESMVRTYVDKPNCIILAISPANQDIATSDAIKLAKDVDPTGERTFGVLTKLDLMDKGTNALEVLEGRSYRLQHPWVGIVNRSQADINKNVDMMLARRKEREYFDTSPDYGHLASKMGSEYLAKLLSKHLESVIRTRIPSILSLINKSIEELERELDRMGRPVAVDAGAQLYTILEMCRAFDKIFKEHLDGGR--------PGGDRIYGVFDN 372
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX2_RAT (Interferon-induced GTP-binding protein Mx2 OS=Rattus norvegicus GN=Mx2 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.405e-26 Identity = 70/202 (34.65%), Postives = 121/202 (59.90%), Query Frame = 1 Query: 4 ADTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG-EITESKAGQGALLLNILSKYSEAFSXMVEGK 594 AD +I+ +I +YI++ + L V P+N D+A ++AL +A DPDG RTIGI+TK D++DRGT+ + +++ V L+ GY+ V R Q+DI S+ +AL E+ FF+ P + L + + VP LA++L L+ HI LP L+++I + S ++E YG +I E + + L+ ++ +++ + +VEG+ Sbjct: 190 ADIGRQIKRLITNYIQKQETINLVVVPSNVDIATTEALSMAQKVDPDGDRTIGILTKPDLVDRGTEDKVVDVVRNLVCHLKKGYMIVKCRGQQDIQEQLSLAEALQKEQVFFKEHPQFRALLEDGKATVPCLAERLTMELISHICKSLPLLENQIKESHQSTSEELQKYGADIPEDENEKTLFLIEKINAFNQDITAIVEGE 391
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX1_HORSE (Interferon-induced GTP-binding protein Mx1 OS=Equus caballus GN=MX1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.405e-26 Identity = 68/202 (33.66%), Postives = 120/202 (59.41%), Query Frame = 1 Query: 4 ADTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG-EITESKAGQGALLLNILSKYSEAFSXMVEGK 594 AD +I+T+I YI++ + L V P+N D+A ++AL +A DP+G RTIGI+TK D++D+GT+ + +++ + L+ GY+ V R Q+DI S+ +AL E+ FF P + GL + R VP LA++L L+ HI LP L+++I + +++ E YG +I E + + L+ ++ +++ + V+G+ Sbjct: 192 ADIGRQIKTLIRKYIQRQETINLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEEQVVDVVRNLICHLKKGYMIVKCRGQQDIQDRLSLAEALQREKAFFEENPYFRGLLEEGRASVPCLAERLTTELITHISKSLPLLENQIKESYQNLSDELQKYGTDIPEDETEKTFFLIVKITTFNQNITSFVQGE 393
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX3_RAT (Interferon-induced GTP-binding protein Mx3 OS=Rattus norvegicus GN=Mx3 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.427e-25 Identity = 69/202 (34.16%), Postives = 121/202 (59.90%), Query Frame = 1 Query: 4 ADTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG-EITESKAGQGALLLNILSKYSEAFSXMVEGK 594 +D +I+ +I +YI++ + L V P+N D+A ++AL +A DPDG RTIGI+TK D++DRGT+ + +++ V L+ GY+ V R Q+DI S+ +AL E+ FF+ P + L + + VP LA++L L+ HI LP L+++I + S ++E YG +I E + + L+ ++ +++ + +VEG+ Sbjct: 190 SDIGRQIKRLITNYIQKQETINLVVVPSNVDIATTEALSMAQEVDPDGDRTIGILTKPDLVDRGTEDKVVDVVRNLVCHLKKGYMIVKCRGQQDIQEQLSLAEALQKEQVFFKEHPQFRALLEDGKATVPCLAERLTMELISHICKSLPLLENQIKESHQSTSEELQKYGADIPEDENEKTLFLIEKINAFNQDITAIVEGE 391
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX2_MOUSE (Interferon-induced GTP-binding protein Mx2 OS=Mus musculus GN=Mx2 PE=2 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.061e-24 Identity = 68/202 (33.66%), Postives = 121/202 (59.90%), Query Frame = 1 Query: 4 ADTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG-EITESKAGQGALLLNILSKYSEAFSXMVEGK 594 AD +I+ +I +YI++ + L V P+N D+A ++AL +A DP+G RTIGI+TK D++DRGT+ + +++ V L+ GY+ V R Q+DI S+ +AL E+ FF+ P + L + + VP LA++L L+ HI LP L+++I + S ++E YG +I E + + L+ ++ +++ + +V+G+ Sbjct: 185 ADIGRQIKRLIKTYIQKQETINLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDRGTEDKVVDVVRNLVYHLKKGYMIVKCRGQQDIQEQLSLTEALQNEQIFFKEHPHFRVLLEDGKATVPCLAERLTAELISHICKSLPLLENQIKESHQSASEELQKYGMDIPEDDSEKTFFLIEKINAFNQDITALVQGE 386
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX1_CANFA (Interferon-induced GTP-binding protein Mx1 OS=Canis familiaris GN=MX1 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.061e-24 Identity = 69/202 (34.16%), Postives = 114/202 (56.44%), Query Frame = 1 Query: 4 ADTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG-EITESKAGQGALLLNILSKYSEAFSXMVEGK 594 AD + + +I YI + + L V P N D+A ++AL +A DPDG RTIGI+TK D++DRGT+ + ++ V L+ GY+ V R Q+DI S+ +AL E+ FF P + L + R VP LA+KL L+ HI LP L+++I + +E YG ++ E + + L++ L+ +++ S +++G+ Sbjct: 188 ADIGRQTKQLIRKYILKQETINLVVVPCNVDIATTEALSMAQEVDPDGDRTIGILTKPDLVDRGTEGKVVDVAQNLVCHLKKGYMIVKCRGQQDIQDQVSLAEALQKEKDFFEDHPHFRVLLEEGRATVPNLAEKLTSELITHICKTLPLLENQIKENHEKITEELQKYGSDVPEDEHEKMFFLIDKLNAFNQDISSLIQGE 389
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX1_PONAB (Interferon-induced GTP-binding protein Mx1 OS=Pongo abelii GN=MX1 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.691e-24 Identity = 65/202 (32.18%), Postives = 120/202 (59.41%), Query Frame = 1 Query: 4 ADTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG-EITESKAGQGALLLNILSKYSEAFSXMVEGK 594 AD +I+T+I YI++ + L V P+N D+A ++AL +A DP+G RTIGI+TK D++D+GT+ + +++ V L+ GY+ V R Q++I S+ +AL E+ FF P + L + + VP LA+KL L+ HI LP L+++I + + +E YG ++ E + + L++ ++ +++ + +++G+ Sbjct: 192 ADIGYKIKTLIKKYIQRQETISLVVVPSNVDIATTEALSMAQEVDPEGDRTIGILTKPDLVDKGTEDKVVDVVRNLVFHLKKGYMIVKCRGQQEIQDQLSLSEALQREKIFFEDHPYFRDLLEEGKATVPCLAEKLTSELITHICKSLPLLENQIRESHQRITEELQKYGVDVPEDENEKMFFLIDKINAFNQDITALIQGE 393
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX1_PIG (Interferon-induced GTP-binding protein Mx1 OS=Sus scrofa GN=MX1 PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.691e-24 Identity = 69/205 (33.66%), Postives = 118/205 (57.56%), Query Frame = 1 Query: 7 DTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTD------ARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG-EITESKAGQGALLLNILSKYSEAFSXMVEGK 594 D E +I+++I YI + + L V P N D+A ++AL++A DP+G RTIGI+TK D++D+GT+ ARNL V L+ GY+ V R Q+DI S+ AL E+ FF + + L + R +P LA++L L+ HI LP L+++I + + +E YG +I E ++G+ L++ + ++ + +++G+ Sbjct: 194 DIEYQIKSLIKKYICKQETINLVVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDKGTEDKIVDVARNL----VFHLKKGYMIVKCRGQQDIQEQLSLAKALQKEQAFFENHAHFRDLLEEGRATIPCLAERLTSELIMHICKTLPLLENQIKESHQKITEELQKYGSDIPEDESGKMFFLIDKIDAFNSDITALIQGE 394 The following BLAST results are available for this feature:
BLAST of CX296509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296509 ID=CX296509; Name=CX296509; organism=Citrus clementina; type=EST; length=663bpback to top |