CX296509

Overview
NameCX296509
Unique NameCX296509
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length663
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX_SOLSE (Interferon-induced GTP-binding protein Mx OS=Solea senegalensis GN=mx PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.785e-21
Identity = 64/174 (36.78%), Postives = 99/174 (56.90%), Query Frame = 1
Query:   19 RIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGEITESKAGQ 528
            +I+ +I  +I +   + L V   N DLA ++ALQ+A   DP+G RT+GI+TK D++D+GT+    ++L  +VI L+ GY+ V  R Q++IM   S+ +A+  E+ FF     +  L D  +  VP+LA+KL   LV HI+  LP L+ +I   L     E   YG    S A +
Sbjct:  160 QIKKLIHKFITKQETICLVVHACNVDLATTEALQMAQEEDPEGERTLGILTKPDLVDKGTEQMVIDILQNEVIHLKKGYMIVRCRGQQEIMQKVSLAEAIEREKAFFADHAHFCSLYDDGQATVPRLAEKLTLELVHHIEKSLPRLEEQIEEKLEQAQAELVRYGTGPPSDAAE 333          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX2_CANFA (Interferon-induced GTP-binding protein Mx2 OS=Canis familiaris GN=MX2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.785e-21
Identity = 63/201 (31.34%), Postives = 109/201 (54.23%), Query Frame = 1
Query:    7 DTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKE-HASYGEITESKAGQGALLLNILSKYSEAFSXMVEGK 594
            D   +I+ +I +YI++   + L V P N D+A ++AL +A   DP+G RTIG++TK D++DRGT+    N+       L+ GY+ V  R QE+I    S+ +A   E  FF++ P +  L +  +  VP LA++L + L+ HI   LP L+ +I  +      E H     I  ++A +   L+  +  +++    ++EG+
Sbjct:  240 DIGVQIKALIKNYIQKQETINLVVVPCNVDIATTEALSMAQEVDPNGDRTIGVLTKPDLVDRGTEKTVVNVAQNLTYHLQKGYMIVRCRGQEEITNQLSLAEATEKERMFFQTHPYFRALLEEGKATVPCLAERLTKELILHINKSLPLLEKQIRESHQRATDELHQCGDSIPSNEADKMFFLIEKIKLFNQDIDKLIEGE 440          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX_DICLA (Interferon-induced GTP-binding protein Mx OS=Dicentrarchus labrax GN=mx PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 4.750e-21
Identity = 59/165 (35.76%), Postives = 96/165 (58.18%), Query Frame = 1
Query:   19 RIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG 501
            +I+ +I  +I +   + L V P N D+A ++AL +A   DPDG RT+GI+TK D++D+GT+    +++  +VI L+ GY+ V  R Q++I    S+ +A+  E+ FF     ++ L +     VP+LA+KL   LV HI+  LP L+ +I   L+    E   YG
Sbjct:  160 QIKRLIQKFITKQETISLVVVPCNVDIATTEALNMAQRVDPDGERTLGILTKPDLVDKGTEETVVDIVHNEVIHLKKGYMIVKCRGQKEITEKVSLTEAIEREKAFFNDHVFFHTLYNDGHATVPKLAEKLTLELVHHIEKSLPRLEEQIEKKLIETQVELNKYG 324          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX1_ICTPU (Interferon-induced GTP-binding protein Mx1 OS=Ictalurus punctatus GN=mx1 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.358e-20
Identity = 58/165 (35.15%), Postives = 97/165 (58.79%), Query Frame = 1
Query:   19 RIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLADR--CGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG 501
            +I+ +I  +I +   + L V P+N D+A ++AL++A   DP+G RT+GI+TK D++D+GT+    +++  ++I L  GY+ V  R Q++IM   S+ +A   E+ FF+  P ++ L +     +P LA+KL   LV HI+  LP L+ +I   L     E   YG
Sbjct:  166 QIKRLIKKFITKQETINLVVVPSNVDIATTEALKMAQEVDPNGERTLGILTKPDLVDKGTEETVVSIIHNEIIYLTKGYMIVRCRGQKEIMDRVSLHEATEKEKDFFKDHPHFSTLYEEGMATIPNLAEKLTLELVHHIELSLPRLEEQIDIKLADSQAELDRYG 330          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX_ONCMY (Interferon-induced GTP-binding protein Mx OS=Oncorhynchus mykiss GN=mx PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.079e-20
Identity = 59/165 (35.76%), Postives = 96/165 (58.18%), Query Frame = 1
Query:   19 RIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG 501
            +I+ +I  +I +   + L V P N D+A ++AL++A   DP+G RT+GI+TK D++D+GT+    +++  +VI L  GY+ V  R Q++IM   S+ +A   E+ FF+     + L D     +P+LA+KL   LV HI+  LP L+ +I + L     E   YG
Sbjct:  161 QIKRLIRKFIMKQETISLVVVPCNVDIATTEALKMAQEVDPEGERTLGILTKPDLVDKGTEETVVDIVHNEVIHLTKGYMIVKCRGQKEIMERVSLTEATEREKAFFKEHAHLSTLYDEGHATIPKLAEKLTLELVHHIEKSLPRLEEQIEAKLSETHAELERYG 325          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX_CTEID (Interferon-induced GTP-binding protein Mx OS=Ctenopharyngodon idella GN=mx PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.021e-20
Identity = 58/169 (34.32%), Postives = 94/169 (55.62%), Query Frame = 1
Query:    7 DTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG 501
            D E +I+ +I  YIK+   + L V PAN D+A ++ALQ+A   D  G RT+GI+TK D++D+G +      +  +VI L+ GY+ V  R Q+DI     + +AL  E  FF     +  L +  +  +P LA++L + LV+HI   LP L+ ++   L    ++  + G
Sbjct:  169 DIEKQIKDLIEKYIKRQETISLVVVPANIDIATTEALQMASKVDSTGQRTLGILTKPDLVDKGMEETVVRTVNNQVIQLKKGYMIVKCRGQQDINEKLDLVEALEKERHFFDEHAHFRSLLEEGKATIPLLAERLTKELVEHITKTLPQLQKQLEMKLEKTTEDLRALG 337          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MXC_DANRE (Interferon-induced GTP-binding protein MxC OS=Danio rerio GN=mxc PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.252e-20
Identity = 58/170 (34.12%), Postives = 96/170 (56.47%), Query Frame = 1
Query:    7 DTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTD--ARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYGE 504
            D E +I+ +I  +IK+   + L V PAN D+A ++AL++A   DP G RT+ I+TK D++DRG +      +  +VI L  GY+ V  R Q+DI    ++ +AL  E +FF   P ++ L +  +  +P L ++L + LV+HI   +P L+++I   L    +     GE
Sbjct:  166 DIEKQIKDLIEKFIKRQETISLVVVPANIDIATTEALKMASTVDPTGQRTLCILTKPDLVDRGMEDTVVRTVNNEVIRLEKGYMIVKCRGQQDINDKLNLVEALEKERRFFDEHPQFSSLLEDGKATIPLLGQRLTEELVEHIAKNVPRLQNQIEMKLQKTFERLKVLGE 335          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX_LARCR (Interferon-induced GTP-binding protein Mx OS=Larimichthys crocea GN=mx PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.959e-20
Identity = 58/165 (35.15%), Postives = 96/165 (58.18%), Query Frame = 1
Query:   19 RIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG 501
            +I+ +I  +IK+   + L V P N D+A ++AL++A   DPDG RT+ I+TK D++ +GT+    +++  +VI L+ GY+ V  R Q++I    S+ +A+  E+ FF+    ++ L +     VP+LA+KL   LV HI+  LP L+ +I   L     E   YG
Sbjct:  160 QIKRLIQKFIKKQETINLVVVPCNMDIATTEALKMAQEVDPDGERTLVILTKPDLVKKGTEETVIDIVHNEVIHLKKGYMIVKCRGQKEITEKVSLPEAIEREKAFFKDHAYFHTLYNDGHATVPKLAEKLTLGLVHHIERSLPRLEEQIEEKLEQTRAELERYG 324          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX2_PIG (Interferon-induced GTP-binding protein Mx2 OS=Sus scrofa GN=MX2 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.170e-19
Identity = 63/201 (31.34%), Postives = 107/201 (53.23%), Query Frame = 1
Query:    7 DTEARIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTD--ARNLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIKAILPGLKSRISSALVSVAKEHASYG-EITESKAGQGALLLNILSKYSEAFSXMVEGK 594
            D   +I+ +I  YI++   + L V P N D+A ++AL++A   DP+G RTIGI+TK D++D G +    N++      L+ GY+ V  R Q++I+   S+ +A   E  FF S P +  L +  +  VP+LA++L   L+ HI   LP L S+I     S  +E    G  +  + A +   L+  +  +++    + EG+
Sbjct:  236 DIGLQIKALIRKYIQEQQTINLVVVPCNVDIATTEALRMAQEVDPEGDRTIGILTKPDLVDTGAEKVVLNVMQNLTYHLKKGYMIVKCRGQQEILNKLSLAEATKREIAFFHSHPHFRILLEEGKATVPRLAERLTVELIGHISKSLPLLFSQIKEIHQSATEELRLCGASVPSNDADKMFFLIEKIKVFNQDIENLAEGE 436          
BLAST of CX296509 vs. ExPASy Swiss-Prot
Match: MX_PERFL (Interferon-induced GTP-binding protein Mx (Fragment) OS=Perca fluviatilis GN=mx PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.404e-19
Identity = 54/140 (38.57%), Postives = 87/140 (62.14%), Query Frame = 1
Query:   19 RIRTMIMSYIKQPSCLILAVTPANSDLANSDALQIAGIADPDGYRTIGIITKLDIMDRGTDAR--NLLLGKVIPLRLGYVGVVNRSQEDIMFNRSIKDALVAEEKFFRSRPVYNGLAD--RCGVPQLAKKLNQILVQHIK 426
            +I+ +I  +IK+   + L V P N D+A ++AL++A   DPDG RT+GI+TK D++D+GT+    +++  +VIPL+ GY+ V  R Q+DI    S+ +A+  E+ FF     +  L +     VP+LA+KL   LV HI+
Sbjct:  162 QIKRLIQKFIKRQETISLVVVPCNVDIATTEALKMAQEVDPDGERTLGILTKPDLVDKGTEETVVDIVHNEVIPLKKGYMIVRCRGQKDITDKVSLTEAIEREKAFFNDHVHFQTLYNDGHATVPKLAEKLTLELVHHIE 301          
The following BLAST results are available for this feature:
BLAST of CX296509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
MX_SOLSE2.785e-2136.78Interferon-induced GTP-binding protein Mx OS=Solea... [more]
MX2_CANFA2.785e-2131.34Interferon-induced GTP-binding protein Mx2 OS=Cani... [more]
MX_DICLA4.750e-2135.76Interferon-induced GTP-binding protein Mx OS=Dicen... [more]
MX1_ICTPU2.358e-2035.15Interferon-induced GTP-binding protein Mx1 OS=Icta... [more]
MX_ONCMY3.079e-2035.76Interferon-induced GTP-binding protein Mx OS=Oncor... [more]
MX_CTEID4.021e-2034.32Interferon-induced GTP-binding protein Mx OS=Cteno... [more]
MXC_DANRE5.252e-2034.12Interferon-induced GTP-binding protein MxC OS=Dani... [more]
MX_LARCR8.959e-2035.15Interferon-induced GTP-binding protein Mx OS=Larim... [more]
MX2_PIG1.170e-1931.34Interferon-induced GTP-binding protein Mx2 OS=Sus ... [more]
MX_PERFL3.404e-1938.57Interferon-induced GTP-binding protein Mx (Fragmen... [more]

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Properties
Property NameValue
Genbank descriptionC05142A12SK FerrChloL1 Citrus clementina cDNA clone C05142A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296509 ID=CX296509; Name=CX296509; organism=Citrus clementina; type=EST; length=663bp
GAGGCTGATACTGAAGCACGAATTAGAACGATGATTATGTCATATATCAA
GCAACCAAGTTGTCTAATTCTTGCAGTTACACCGGCAAATTCAGATTTGG
CAAACTCAGATGCCCTTCAAATTGCTGGAATTGCTGATCCGGATGGTTAT
AGAACCATAGGCATAATCACAAAGTTGGATATTATGGACAGAGGTACTGA
TGCCCGTAATTTGTTACTCGGAAAAGTGATTCCGCTTCGGCTTGGTTATG
TTGGTGTTGTGAATAGGAGTCAGGAGGATATTATGTTCAACCGGAGTATC
AAGGATGCACTAGTGGCTGAGGAAAAGTTCTTCCGTAGTCGCCCTGTATA
TAATGGTCTAGCAGATCGTTGTGGTGTTCCTCAGTTGGCAAAGAAGTTGA
ACCAGATTCTTGTACAACATATCAAGGCTATACTTCCTGGGTTGAAGTCA
CGCATTAGCTCTGCATTAGTTTCTGTTGCAAAGGAGCATGCAAGCTACGG
GGAAATCACAGAATCAAAGGCTGGTCAGGGAGCTCTACTCCTGAATATTC
TTTCTAAATACTCCGAAGCATTTTCTTNCATGGTGGAGGGAAAGAATGAA
GAAATGTCAACATCTGAGCTTTCTGGCGGGGCACGAATTCACTATATTTT
TCAGTCAATCTTT
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