CX296525
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB1_CHLTE (Probable chaperone protein clpB 1 OS=Chlorobium tepidum GN=clpB1 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.255e-21 Identity = 47/74 (63.51%), Postives = 61/74 (82.43%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEAV+A+S A++R+R G+ + RPI SFIF GPTGVGK+ELA+ LA Y F E+A+IR+DMSE+ME HTVS+L Sbjct: 146 QDEAVRAVSDAVKRSRAGMGDEKRPIGSFIFLGPTGVGKTELARTLAEYLFDDEDALIRIDMSEYMEAHTVSRL 219
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_RHIME (Chaperone protein clpB OS=Rhizobium meliloti GN=clpB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.639e-21 Identity = 46/74 (62.16%), Postives = 63/74 (85.14%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q +AV+A+S A+RR+R GL++PNRPI SFIF GPTGVGK+EL KALA + F E A++R+DMSE+ME+H+V++L Sbjct: 575 QGDAVQAVSRAVRRSRAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDETALMRIDMSEYMEKHSVARL 648
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_RALSO (Chaperone protein clpB OS=Ralstonia solanacearum GN=clpB PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.639e-21 Identity = 47/74 (63.51%), Postives = 61/74 (82.43%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEAV+ +S AIRR+R G+ + N+P SF+F GPTGVGK+EL KALA + F SEE +IR+DMSEFME+H+VS+L Sbjct: 576 QDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTELCKALAGFLFDSEEHLIRIDMSEFMEKHSVSRL 649
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: HSP78_SCHPO (Heat shock protein 78, mitochondrial OS=Schizosaccharomyces pombe GN=hsp78 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.140e-21 Identity = 46/74 (62.16%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEA+KAI+ A+R +R GL+N NRP+ASF+F GPTGVGK+ L KALA + F +++AMIR DMSEF E+HT+++L Sbjct: 507 QDEALKAIADAVRLSRAGLQNTNRPLASFLFLGPTGVGKTALTKALAEFLFDTDKAMIRFDMSEFQEKHTIARL 580
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_CAUCR (Chaperone protein clpB OS=Caulobacter crescentus GN=clpB PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.140e-21 Identity = 45/74 (60.81%), Postives = 63/74 (85.14%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEA++A+S A+RRAR GL++P++PI SF+F GPTGVGK+EL K+LA + F E A+ R+DMSE+ME+H+VS+L Sbjct: 571 QDEALEAVSDAVRRARAGLQDPSKPIGSFLFLGPTGVGKTELTKSLAEFLFADEAAITRMDMSEYMEKHSVSRL 644
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNE7 (Chaperone protein clpB 2 OS=Synechococcus elongatus (strain PCC 7942) GN=clpB2 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.140e-21 Identity = 47/74 (63.51%), Postives = 64/74 (86.49%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEAV A++ AIRRAR G+K+P+RPI SF+F GPTGVGK+ELA+ALA F +E+A+IR DMSE+ME++++S+L Sbjct: 585 QDEAVVAVAAAIRRARAGMKDPSRPIGSFLFLGPTGVGKTELARALANCLFDAEDALIRFDMSEYMEKNSISRL 658
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPE_STRPN (ATP-dependent Clp protease ATP-binding subunit clpE OS=Streptococcus pneumoniae GN=clpE PE=2 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 2.795e-21 Identity = 49/74 (66.22%), Postives = 60/74 (81.08%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QD+AV I+ AIRR RVGL PNRPI SF+F GPTGVGK+EL+K LA FGS ++MIR DMSE+ME+H+V+KL Sbjct: 455 QDDAVDKIAKAIRRNRVGLGTPNRPIGSFLFVGPTGVGKTELSKQLAIELFGSADSMIRFDMSEYMEKHSVAKL 528
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNPX (Chaperone protein clpB 2 OS=Synechococcus sp. (strain WH8102) GN=clpB2 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.768e-21 Identity = 48/74 (64.86%), Postives = 60/74 (81.08%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q EAV A++ AIRRAR G+K+P RP+ SF+F GPTGVGK+ELAKALA F EEA++RLDMSEFMER+ ++L Sbjct: 609 QVEAVAAVAAAIRRARAGMKDPRRPVGSFLFLGPTGVGKTELAKALATSLFDEEEALVRLDMSEFMERNASARL 682
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_GEOSL (Chaperone protein clpB OS=Geobacter sulfurreducens GN=clpB PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.227e-21 Identity = 45/74 (60.81%), Postives = 61/74 (82.43%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEA+ ++ AIRRAR GL +PNRPI SF+F GPTGVGK+E AKALA + F ++A++R+DMSE+ E+HTV++L Sbjct: 579 QDEALVLVANAIRRARSGLSDPNRPIGSFLFLGPTGVGKTETAKALAEFLFNDDQAIVRIDMSEYQEKHTVARL 652
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_BIFLO (Chaperone protein clpB OS=Bifidobacterium longum GN=clpB PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.132e-21 Identity = 45/74 (60.81%), Postives = 61/74 (82.43%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q EA+ A+S A+RR+R G+ +PNRP SF+F GPTGVGK+ELAKALA + F E+AM+R+DMSE+ME+ +VS+L Sbjct: 584 QKEAIAAVSDAVRRSRAGISDPNRPTGSFLFLGPTGVGKTELAKALADFLFDDEKAMVRIDMSEYMEKASVSRL 657 The following BLAST results are available for this feature:
BLAST of CX296525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 194
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296525 ID=CX296525; Name=CX296525; organism=Citrus clementina; type=EST; length=224bpback to top |