CX296525
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_BACTN (Chaperone protein clpB OS=Bacteroides thetaiotaomicron GN=clpB PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.387e-20 Identity = 45/74 (60.81%), Postives = 60/74 (81.08%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEA++A++ A+RR+R GL++P RPI SFIF G TGVGK+ELAKALA + F E M R+DMSE+ E+H+VS+L Sbjct: 571 QDEAIEAVADAVRRSRAGLQDPKRPIGSFIFLGTTGVGKTELAKALAEFLFDDESMMTRIDMSEYQEKHSVSRL 644
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPE_BACSU (ATP-dependent Clp protease ATP-binding subunit clpE OS=Bacillus subtilis GN=clpE PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.812e-20 Identity = 44/74 (59.46%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q+ AV+ ++ A+RR+R GLK+ NRP+ SF+F GPTGVGK+EL+K LA FG+++A+IRLDMSE+ME+H VSK+ Sbjct: 414 QEAAVQKVAKAVRRSRAGLKSKNRPVGSFLFVGPTGVGKTELSKTLADELFGTKDAIIRLDMSEYMEKHAVSKI 487
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPC_MYCTU (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium tuberculosis GN=clpC PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.812e-20 Identity = 45/74 (60.81%), Postives = 61/74 (82.43%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q++AVKA+S AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L Sbjct: 521 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRL 594
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPC_MYCLE (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium leprae GN=clpC PE=3 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 1.812e-20 Identity = 45/74 (60.81%), Postives = 61/74 (82.43%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q++AVKA+S AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L Sbjct: 521 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRL 594
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPC_MYCBO (Probable ATP-dependent Clp protease ATP-binding subunit OS=Mycobacterium bovis GN=clpC PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.812e-20 Identity = 45/74 (60.81%), Postives = 61/74 (82.43%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q++AVKA+S AIRR R GLK+P RP SFIF+GP+GVGK+EL+KALA + FG ++A+I++DM EF +R T S+L Sbjct: 521 QEDAVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRL 594
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_CORDI (Chaperone protein clpB OS=Corynebacterium diphtheriae GN=clpB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.812e-20 Identity = 45/74 (60.81%), Postives = 59/74 (79.73%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q EAV A+S A+RRAR G+ +PNRP SF+F GPTGVGK+ELAKALA + F + AM+R+DMSE+ E+H V++L Sbjct: 574 QSEAVVAVSDAVRRARAGVADPNRPTGSFLFLGPTGVGKTELAKALAEFMFDDDRAMVRIDMSEYGEKHAVARL 647
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_CHLPN (Chaperone protein clpB OS=Chlamydia pneumoniae GN=clpB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.812e-20 Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q AV A+S +IR ARVGL +P RP+ F+F GPTGVGK+ELAKALA F EEAM+R DMSE+ME+H++SKL Sbjct: 573 QPFAVSAVSDSIRAARVGLNDPQRPLGVFLFLGPTGVGKTELAKALADLLFNKEEAMVRFDMSEYMEKHSISKL 646
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_STRCO (Chaperone protein clpB OS=Streptomyces coelicolor GN=clpB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.090e-20 Identity = 43/74 (58.11%), Postives = 61/74 (82.43%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q +AV+A+S A+RR+R G+ +P+RP SF+F GPTGVGK+ELAKALA + F E AM+R+DMSE+ E+H+V++L Sbjct: 577 QTQAVRAVSDAVRRSRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMSEYSEKHSVARL 650
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_MYCPE (Chaperone protein clpB OS=Mycoplasma penetrans GN=clpB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.090e-20 Identity = 42/74 (56.76%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEA+K +S + + RVG+ NPNRPI SF+F GPTGVGK+E+AK+LA F +E+A++R++MSE+ME+H++S+L Sbjct: 427 QDEALKLVSDTVLKNRVGINNPNRPIGSFLFVGPTGVGKTEVAKSLAENLFNTEKAIVRINMSEYMEKHSISRL 500
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_DESVH (Chaperone protein clpB OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=clpB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 3.090e-20 Identity = 46/74 (62.16%), Postives = 59/74 (79.73%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q+EAV A+S A+ RAR GL +P+RPI SFIF GPTGVGK+EL K LA F +EE ++RLDMSE+ME+H V++L Sbjct: 578 QEEAVDAVSEAVLRARAGLSDPSRPIGSFIFLGPTGVGKTELCKTLAEALFDTEENIVRLDMSEYMEKHAVARL 651 The following BLAST results are available for this feature:
BLAST of CX296525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 194
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296525 ID=CX296525; Name=CX296525; organism=Citrus clementina; type=EST; length=224bpback to top |