CX296525
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB2_ANASP (Chaperone protein clpB 2 OS=Anabaena sp. (strain PCC 7120) GN=clpB2 PE=3 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 1.751e-23 Identity = 49/74 (66.22%), Postives = 65/74 (87.84%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEAV A++ AI+R+R GL +PNRP ASF+F GPTGVGK+ELAKALA+Y F +E+A++R+DMSE+ME+H VS+L Sbjct: 579 QDEAVTAVADAIQRSRAGLADPNRPTASFVFLGPTGVGKTELAKALASYMFDTEDALVRIDMSEYMEKHAVSRL 652
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPC_STAHJ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus haemolyticus (strain JCSC1435) GN=clpC PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.287e-23 Identity = 52/74 (70.27%), Postives = 63/74 (85.14%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q++AV +IS A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG E+AMIR+DMSEFME+H VS+L Sbjct: 513 QNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEEDAMIRVDMSEFMEKHAVSRL 586
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_RHOBA (Chaperone protein clpB OS=Rhodopirellula baltica GN=clpB PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 2.287e-23 Identity = 51/74 (68.92%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEAV A+S A+RR+R GL++PNRPI SF+F GPTGVGK+EL KALA F E AM+R+DMSEFMERH+VS+L Sbjct: 596 QDEAVTAVSDAVRRSRSGLQDPNRPIGSFLFLGPTGVGKTELCKALAEVMFDDESAMVRIDMSEFMERHSVSRL 669
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_COXBU (Chaperone protein clpB OS=Coxiella burnetii GN=clpB PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.287e-23 Identity = 48/74 (64.86%), Postives = 64/74 (86.49%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEAV A++ AIRR+R GL +PNRP+ SF+F GPTGVGK+EL KALA + F +E+AM+R+DMSEFME+H+V++L Sbjct: 575 QDEAVNAVANAIRRSRAGLSDPNRPVGSFLFLGPTGVGKTELCKALAVFLFDTEDAMVRIDMSEFMEKHSVARL 648
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_RHILO (Chaperone protein clpB OS=Rhizobium loti GN=clpB PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.986e-23 Identity = 49/74 (66.22%), Postives = 64/74 (86.49%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q EAV+A+S A+RRAR GL++PNRPI SFIF GPTGVGK+EL KALA++ F + AM+R+DMSEFME+H+V++L Sbjct: 573 QGEAVQAVSKAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALASFLFDDDSAMVRIDMSEFMEKHSVARL 646
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_MEIRU (Chaperone protein clpB OS=Meiothermus ruber GN=clpB PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 2.986e-23 Identity = 50/74 (67.57%), Postives = 63/74 (85.14%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEA+ A++ AIRRAR GLK+PNRPI SF+F GPTGVGK+ELAK LAA F +EE M+R+DMSE+ E+HTV++L Sbjct: 563 QDEAIVAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAASLFDTEENMVRIDMSEYQEKHTVARL 636
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPE_LACLM (ATP-dependent Clp protease ATP-binding subunit clpE OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpE PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 3.900e-23 Identity = 53/74 (71.62%), Postives = 61/74 (82.43%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEAV IS AIRR+RVGL PNRPI SF+F GPTGVGK+ELAK LA FGS E+MIR DMSE+ME+H+V+KL Sbjct: 449 QDEAVDKISKAIRRSRVGLGKPNRPIGSFLFVGPTGVGKTELAKQLAKELFGSSESMIRFDMSEYMEKHSVAKL 522
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPC_STAES (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpC PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.900e-23 Identity = 51/74 (68.92%), Postives = 63/74 (85.14%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q++AV +IS A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++AMIR+DMSEFME+H VS+L Sbjct: 513 QNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRL 586
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPC_STAEQ (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpC PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 3.900e-23 Identity = 51/74 (68.92%), Postives = 63/74 (85.14%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q++AV +IS A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++AMIR+DMSEFME+H VS+L Sbjct: 513 QNDAVNSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRL 586
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_XYLFT (Chaperone protein clpB OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=clpB PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 5.094e-23 Identity = 47/74 (63.51%), Postives = 63/74 (85.14%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEA+K +S A+RR+R GL +PNRP SF+F GPTGVGK+EL KALA + F S++AM+R+DMSEFME+H+V++L Sbjct: 573 QDEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDAMVRIDMSEFMEKHSVARL 646 The following BLAST results are available for this feature:
BLAST of CX296525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 194
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296525 ID=CX296525; Name=CX296525; organism=Citrus clementina; type=EST; length=224bpback to top |