CX296525
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_XANCP (Chaperone protein clpB OS=Xanthomonas campestris pv. campestris GN=clpB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.653e-23 Identity = 49/74 (66.22%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q+EA+K +S A+RR+R GL +PNRP SF+F GPTGVGK+EL KALA + F S EAMIR+DMSEFME+H+VS+L Sbjct: 573 QEEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTELCKALADFLFDSTEAMIRIDMSEFMEKHSVSRL 646
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_LACLM (Chaperone protein clpB OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=clpB PE=2 SV=3) HSP 1 Score: 105.916 bits (263), Expect = 6.653e-23 Identity = 50/74 (67.57%), Postives = 64/74 (86.49%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEAV+A+S AI RAR G+++PNRP+ SF+F GPTGVGK+ELAKALA F SEE M+R+DMSE+ME+H+VS+L Sbjct: 576 QDEAVEAVSDAIIRARAGIQDPNRPLGSFLFLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEYMEKHSVSRL 649
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_LACLA (Chaperone protein clpB OS=Lactococcus lactis subsp. lactis GN=clpB PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.653e-23 Identity = 50/74 (67.57%), Postives = 64/74 (86.49%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEAV+A+S AI RAR G+++PNRP+ SF+F GPTGVGK+ELAKALA F SEE M+R+DMSE+ME+H+VS+L Sbjct: 576 QDEAVEAVSDAIIRARAGIQDPNRPLGSFLFLGPTGVGKTELAKALAENLFDSEEHMVRIDMSEYMEKHSVSRL 649
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPE_LACLA (ATP-dependent Clp protease ATP-binding subunit clpE OS=Lactococcus lactis subsp. lactis GN=clpE PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.689e-23 Identity = 52/74 (70.27%), Postives = 61/74 (82.43%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEAV I+ AIRR+RVGL PNRPI SF+F GPTGVGK+ELAK LA FGS E+MIR DMSE+ME+H+V+KL Sbjct: 449 QDEAVDKIAKAIRRSRVGLGKPNRPIGSFLFVGPTGVGKTELAKQLAKELFGSSESMIRFDMSEYMEKHSVAKL 522
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPC_STAS1 (ATP-dependent Clp protease ATP-binding subunit clpC OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=clpC PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.689e-23 Identity = 51/74 (68.92%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q +AV +IS A+RRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA FG ++AMIR+DMSEFME+H VS+L Sbjct: 513 QKDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGEDDAMIRVDMSEFMEKHAVSRL 586
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_OCEIH (Chaperone protein clpB OS=Oceanobacillus iheyensis GN=clpB PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.689e-23 Identity = 51/74 (68.92%), Postives = 60/74 (81.08%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q EAV A++ AIRRAR GLK+P RPI SFIF GPTGVGK+ELA+ALA F E+AMIR+DMSE+MERH S+L Sbjct: 516 QSEAVNAVAKAIRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAEVMFADEDAMIRIDMSEYMERHATSRL 589
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB2_SYNY3 (Chaperone protein clpB 2 OS=Synechocystis sp. (strain PCC 6803) GN=clpB2 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.689e-23 Identity = 50/74 (67.57%), Postives = 63/74 (85.14%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEAV A++ AI+R+R GL +PNRP ASFIF GPTGVGK+ELAKALA F +EEA++R+DMSE+ME+H VS+L Sbjct: 579 QDEAVTAVAEAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDMSEYMEKHAVSRL 652
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_XYLFA (Chaperone protein clpB OS=Xylella fastidiosa GN=clpB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.482e-22 Identity = 46/74 (62.16%), Postives = 63/74 (85.14%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q+EA+K +S A+RR+R GL +PNRP SF+F GPTGVGK+EL KALA + F S++AM+R+DMSEFME+H+V++L Sbjct: 573 QEEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTELCKALAEFLFDSQDAMVRIDMSEFMEKHSVARL 646
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_VIBPA (Chaperone protein clpB OS=Vibrio parahaemolyticus GN=clpB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.482e-22 Identity = 48/74 (64.86%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q EAV +S AIRR+R GL +PNRPI SF+F GPTGVGK+EL K LA++ F SE+AM+R+DMSEFME+H+V++L Sbjct: 573 QSEAVAVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLASFMFDSEDAMVRIDMSEFMEKHSVARL 646
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_RHOPA (Chaperone protein clpB OS=Rhodopseudomonas palustris GN=clpB PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.482e-22 Identity = 49/74 (66.22%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q EAV A+S A+RRAR GL++PNRP+ SF+F GPTGVGK+EL KALA Y F E AM+R+DMSEFME+H+V++L Sbjct: 574 QFEAVHAVSTAVRRARAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRIDMSEFMEKHSVARL 647 The following BLAST results are available for this feature:
BLAST of CX296525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 194
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296525 ID=CX296525; Name=CX296525; organism=Citrus clementina; type=EST; length=224bpback to top |