CX296525
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_LISMF (Chaperone protein clpB OS=Listeria monocytogenes serotype 4b (strain F2365) GN=clpB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.355e-22 Identity = 49/74 (66.22%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QD+AV+ +S A+ RAR G+K+P RPI SFIF GPTGVGK+ELAKALA F SE+ MIR+DMSE+ME+H+VS+L Sbjct: 579 QDDAVQLVSDAVLRARAGIKDPKRPIGSFIFLGPTGVGKTELAKALAFNMFDSEDHMIRIDMSEYMEKHSVSRL 652
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_LISIN (Chaperone protein clpB OS=Listeria innocua GN=clpB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.355e-22 Identity = 49/74 (66.22%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QD+AV+ +S A+ RAR G+K+P RPI SFIF GPTGVGK+ELAKALA F SE+ MIR+DMSE+ME+H+VS+L Sbjct: 579 QDDAVQLVSDAVLRARAGIKDPKRPIGSFIFLGPTGVGKTELAKALAYNMFDSEDHMIRIDMSEYMEKHSVSRL 652
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_ENTFA (Chaperone protein clpB OS=Enterococcus faecalis GN=clpB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.355e-22 Identity = 48/74 (64.86%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEAV A+S A+ R+R GL++PNRP+ SF+F GPTGVGK+ELAKALA F SE+ M+R+DMSE+ME+H VS+L Sbjct: 576 QDEAVDAVSDAVIRSRAGLQDPNRPLGSFLFLGPTGVGKTELAKALAEDLFDSEDHMVRIDMSEYMEKHAVSRL 649
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_BORPE (Chaperone protein clpB OS=Bordetella pertussis GN=clpB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.355e-22 Identity = 48/74 (64.86%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEAV+ +S AIRR+R GL +P+RP SF+F GPTGVGK+EL +ALA + F SEE MIR+DMSEFME+H+V++L Sbjct: 579 QDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARL 652
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_BORPA (Chaperone protein clpB OS=Bordetella parapertussis GN=clpB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.355e-22 Identity = 48/74 (64.86%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEAV+ +S AIRR+R GL +P+RP SF+F GPTGVGK+EL +ALA + F SEE MIR+DMSEFME+H+V++L Sbjct: 579 QDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARL 652
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_BORBR (Chaperone protein clpB OS=Bordetella bronchiseptica GN=clpB PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.355e-22 Identity = 48/74 (64.86%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QDEAV+ +S AIRR+R GL +P+RP SF+F GPTGVGK+EL +ALA + F SEE MIR+DMSEFME+H+V++L Sbjct: 579 QDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARL 652
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVY (Chaperone protein clpB OS=Vibrio vulnificus (strain YJ016) GN=clpB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.255e-21 Identity = 46/74 (62.16%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q EAV+ ++ AIRR+R GL +PN+PI SF+F GPTGVGK+EL K LA + F SE+AM+R+DMSEFME+H+V++L Sbjct: 573 QKEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDMSEFMEKHSVARL 646
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_VIBVU (Chaperone protein clpB OS=Vibrio vulnificus GN=clpB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.255e-21 Identity = 46/74 (62.16%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 Q EAV+ ++ AIRR+R GL +PN+PI SF+F GPTGVGK+EL K LA + F SE+AM+R+DMSEFME+H+V++L Sbjct: 573 QKEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCKTLANFMFDSEDAMVRIDMSEFMEKHSVARL 646
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_STAES (Chaperone protein clpB OS=Staphylococcus epidermidis (strain ATCC 12228) GN=clpB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.255e-21 Identity = 48/74 (64.86%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QD+AV +S A+ RAR G+K+PNRPI SF+F GPTGVGK+ELAK+LA+ F SE+ MIR+DMSE+ME+H VS+L Sbjct: 577 QDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLASSLFDSEKHMIRIDMSEYMEKHAVSRL 650
BLAST of CX296525 vs. ExPASy Swiss-Prot
Match: CLPB_STAEQ (Chaperone protein clpB OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=clpB PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.255e-21 Identity = 48/74 (64.86%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 3 QDEAVKAISPAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVSKL 224 QD+AV +S A+ RAR G+K+PNRPI SF+F GPTGVGK+ELAK+LA+ F SE+ MIR+DMSE+ME+H VS+L Sbjct: 577 QDKAVDLVSDAVVRARAGIKDPNRPIGSFLFLGPTGVGKTELAKSLASSLFDSEKHMIRIDMSEYMEKHAVSRL 650 The following BLAST results are available for this feature:
BLAST of CX296525 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 194
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Sequences
The
following sequences are available for this feature:
EST sequence >CX296525 ID=CX296525; Name=CX296525; organism=Citrus clementina; type=EST; length=224bpback to top |