CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 58/135 (42.96%), Postives = 77/135 (57.04%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPM-----EEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            YYE+L VP+ AS E +K+AY+K A+K HPDK    E    +F E+ +AYEVLSD E R IYD YGE+ LK+                DIF SFFGG P          +  +G+DV+  L  +LEDL+ G + K+
Sbjct:   14 YYEILGVPKDASPEDLKKAYKKAAIKNHPDKGGDPE----KFKELAHAYEVLSDPEKREIYDQYGEDALKEGMGGGGGMHDPF----DIFQSFFGGSPFGGVGSSRGRRQRRGEDVVHPLKVSLEDLFTGTTKKL 140          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_THISH (Chaperone protein dnaJ OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 49/136 (36.03%), Postives = 82/136 (60.29%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNI-QDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYE+L V + AS+ ++K+A+R+LA+K+HPD+N G++E+ ++F E   AYE+L+D + R  YD +G  G+   A           +I +DIF   FGGG      ++ +G D+   L+ TLE+   G  +K+
Sbjct:    1 MAKRDYYEILGVAKNASEAELKKAFRRLAMKHHPDRNPGDKESEEKFKEAKEAYEILTDPQKRAAYDQFGHAGVDPSAGGGARGGASFSDIFEDIFGDIFGGG-RGGGSRVYRGSDLQYNLELTLEEAVFGTEVKI 135          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SALPK (Chaperone protein dnaJ OS=Salmonella paratyphi A (strain AKU_12601) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 51/132 (38.64%), Postives = 77/132 (58.33%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVN--IQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+D++ R  YD YG    +Q             +    D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFNGGADFSDIFGDVFGDIFGGG--RGRQRAARGADLRYNMDLTLEEAVRG 130          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SALPA (Chaperone protein dnaJ OS=Salmonella paratyphi A GN=dnaJ PE=2 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 51/132 (38.64%), Postives = 77/132 (58.33%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVN--IQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+D++ R  YD YG    +Q             +    D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFNGGADFSDIFGDVFGDIFGGG--RGRQRAARGADLRYNMDLTLEEAVRG 130          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEPG (Chaperone protein dnaJ OS=Pseudomonas putida (strain GB-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 55/136 (40.44%), Postives = 77/136 (56.62%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + YYEVL V RGAS+  +K+AYR+LA+KYHPD+N G++E+  +F E N AYEVLSD+  R  +D YG  G+   +           N  DI    FS FFGGG         +G D+   L+  LE+   G ++ +
Sbjct:    4 RDYYEVLGVERGASEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDASKRAAFDQYGHAGV-DPSMGGGGAGFGGANFSDIFGDVFSDFFGGGRGGGRGGAQRGSDLRYTLELNLEEAVRGTTVSI 138          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_NITSB (Chaperone protein dnaJ OS=Nitratiruptor sp. (strain SB155-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 58/137 (42.34%), Postives = 79/137 (57.66%), Query Frame = 1
Query:  250 YYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFG-------GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            YYE+L+V R AS E+IK+AYRKLALKYHPD+N  N EA ++F  IN AY+VLSD E R +YD YG+ GL ++            +I D F S FG       G     DEK     D+ +E++ + ++   G   +V
Sbjct:    6 YYELLEVDRNASFEEIKKAYRKLALKYHPDRNPDNPEAEEKFKLINEAYQVLSDEEKRALYDQYGKAGL-ENQGFSGFNQKSFDDIMDFFESVFGETFGGGFGSRRRSDEKYPL--DLSIEMEISFQEALFGTQKEV 139          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CHRVO (Chaperone protein dnaJ OS=Chromobacterium violaceum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 54/132 (40.91%), Postives = 75/132 (56.82%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA--AXXXXXXXXXVNIQDIFSSFFGGGPMEED---EKIVKGDDVIVELDATLEDLYMG 624
            + YY+VL V R ASD+ IK+AYRKLA+KYHPD+N  ++EA  +F E+  AYE+LSDS+ R  YD +G  G+   A             +  DIFS  FGGG          + +G D+   ++ TLE+   G
Sbjct:    4 RDYYDVLGVNRDASDDDIKKAYRKLAMKYHPDRNPDSKEAEDKFKEVKEAYEILSDSQKRGAYDQFGHAGVDPQAGMGGGGQGFGGFGDFADIFSDIFGGGRGGSGGGRSNVYRGADLRYNMEITLEEAARG 135          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CAMJD (Chaperone protein dnaJ OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 50/97 (51.55%), Postives = 66/97 (68.04%), Query Frame = 1
Query:  247 SYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHA-AXXXXXXXXXVNIQDIFSSFFG 534
            SYYE+L++ + A  E IK+AYRK+ALKYHPD+NQG++EA  +F  +N AYEVLS+ E R IYD YG++ LK               ++ DIFSSFFG
Sbjct:    4 SYYEILEITQNADKETIKKAYRKMALKYHPDRNQGDKEAEDKFKLVNEAYEVLSNDEKRAIYDRYGKDALKGGGFGSNSSGFGGFEDLGDIFSSFFG 100          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_ACISJ (Chaperone protein dnaJ OS=Acidovorax sp. (strain JS42) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.907e-21
Identity = 52/138 (37.68%), Postives = 79/138 (57.25%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGN--EEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQ----DIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + +YEVL VP+ ASD++IK+AYRKLA+KYHPD+NQG+  + A ++F E   AYE+LSD++ R  YD YG  G+  +                   DIF   FGG       ++ +G+D+   ++ TLE+   G   ++
Sbjct:    4 RDFYEVLGVPKNASDDEIKKAYRKLAMKYHPDRNQGDAAKPAEEKFKEAKEAYEILSDAQKRAAYDQYGHAGVDPNMRGGMGGAEGFGGFAEAFGDIFGDMFGGARGRGGRQVYRGNDLSYAMEITLEEAAKGKEAQI 141          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_SALAR (Chaperone protein dnaJ OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.102e-21
Identity = 52/132 (39.39%), Postives = 77/132 (58.33%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVN--IQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYEVL V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYEVL+D++ R  YD YG    +Q             +    D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKRDYYEVLGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKAAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFNGGADFSDIFGDVFGDIFGGG--RGRQRAARGADLRYNMDLTLEEAVRG 130          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNJH_ATRNU3.907e-2142.96DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ_THISH3.907e-2136.03Chaperone protein dnaJ OS=Thioalkalivibrio sp. (st... [more]
DNAJ_SALPK3.907e-2138.64Chaperone protein dnaJ OS=Salmonella paratyphi A (... [more]
DNAJ_SALPA3.907e-2138.64Chaperone protein dnaJ OS=Salmonella paratyphi A G... [more]
DNAJ_PSEPG3.907e-2140.44Chaperone protein dnaJ OS=Pseudomonas putida (stra... [more]
DNAJ_NITSB3.907e-2142.34Chaperone protein dnaJ OS=Nitratiruptor sp. (strai... [more]
DNAJ_CHRVO3.907e-2140.91Chaperone protein dnaJ OS=Chromobacterium violaceu... [more]
DNAJ_CAMJD3.907e-2151.55Chaperone protein dnaJ OS=Campylobacter jejuni sub... [more]
DNAJ_ACISJ3.907e-2137.68Chaperone protein dnaJ OS=Acidovorax sp. (strain J... [more]
DNAJ_SALAR5.102e-2139.39Chaperone protein dnaJ OS=Salmonella arizonae (str... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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