CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEF5 (Chaperone protein dnaJ OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.102e-21
Identity = 56/139 (40.29%), Postives = 78/139 (56.12%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYEVL V RG+SD ++K+AYR+LA+K+HPD+N G++ +   F E N AYEVLSDS  R  YD YG  G+   +           N  DI    FS FFGGG         +G D+   L+  LE+   G ++ +
Sbjct:    1 MAKRDYYEVLGVERGSSDAELKKAYRRLAMKHHPDRNPGDKASEDMFKEANEAYEVLSDSSKRAAYDQYGHAGV-DPSMGGGGGGFGGQNFSDIFGDVFSDFFGGGRGGSRGGAQRGSDLRYTLELNLEEAVRGTTVNI 138          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PELLD (Chaperone protein dnaJ OS=Pelodictyon luteolum (strain DSM 273) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.102e-21
Identity = 58/136 (42.65%), Postives = 77/136 (56.62%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA--XXXXXXXXXVNIQDIFSSF---FGGGPMEEDEKI----VKGDDVIVELDATLEDLYMG 624
            + YYEVL V R A  ++IK+AYRKLALKYHPDKN  N++A   F E+N AYEVLS+ + R  YD +G  G+   AA            +  DIFS+F   FGGG      +     + G D+ + L  TLE++  G
Sbjct:    3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKDAEDHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGGGGGQYGGGADFSDIFSAFNDMFGGGGGGSQRRRAASGIPGVDLKIRLKLTLEEIAKG 138          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_STACT (Chaperone protein dnaJ OS=Staphylococcus carnosus (strain TM300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.664e-21
Identity = 58/135 (42.96%), Postives = 76/135 (56.30%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLK-----QHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYEVL V + AS ++IK+AYRKL+ KYHPD NQ  E A ++F EI+ AYEVLSD   R  YD +G +G +     Q               +DIFSSFFGGG   +     KGDD+   +  T E+   G
Sbjct:    1 MAKRDYYEVLGVSKDASKDEIKKAYRKLSKKYHPDINQ-EEGAEEKFKEISEAYEVLSDENKRANYDQFGHDGPQGGFGGQGFGGGQDFGGFGGGFEDIFSSFFGGGAQRDPNVPRKGDDLQYTMTVTFEEAAFG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_KLEP7 (Chaperone protein dnaJ OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.664e-21
Identity = 49/132 (37.12%), Postives = 76/132 (57.58%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGG--GPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYE+L+D++ R  YD YG    +Q             +  DIF   FG   G     ++  +G D+   ++ TLE+   G
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEILTDAQKRAAYDQYGHAAFEQGGMGGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRG 132          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_KLEP3 (Chaperone protein dnaJ OS=Klebsiella pneumoniae (strain 342) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.664e-21
Identity = 49/132 (37.12%), Postives = 76/132 (57.58%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGG--GPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYE+L V + A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYE+L+D++ R  YD YG    +Q             +  DIF   FG   G     ++  +G D+   ++ TLE+   G
Sbjct:    1 MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEILTDAQKRAAYDQYGHAAFEQGGMGGGGGFGGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMELTLEEAVRG 132          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_ENTS8 (Chaperone protein dnaJ OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.664e-21
Identity = 51/137 (37.23%), Postives = 77/137 (56.20%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVN-------IQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A K YYE+L VP+ A + +IK+AY++LA+K+HPD+NQG++EA  +F EI  AYE+L+D++ R  YD YG    +Q             N         D+F   FGGG      +  +G D+   ++ TLE+   G
Sbjct:    1 MAKKDYYEILGVPKTADEREIKKAYKRLAMKFHPDRNQGDKEAEAKFKEIKEAYEILTDAQKRAAYDQYGHAAFEQGGMGGGGFGGGFGNGADFSDIFGDVFGDIFGGG---RGRRASRGADLRYNMELTLEEAVRG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_EDWI9 (Chaperone protein dnaJ OS=Edwardsiella ictaluri (strain 93-146) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.664e-21
Identity = 52/135 (38.52%), Postives = 76/135 (56.30%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ-----HAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A K YYE+L V R A + +IK+AY++LA+KYHPD+NQG++EA  +F EI  AYE+L+D++ R  YD YG    +Q                     D+F   FGGG     ++  +G D+   +D TLE+   G
Sbjct:    1 MAKKDYYEILGVSREADEREIKKAYKRLAMKYHPDRNQGDKEAEDKFKEIKEAYEILTDAQKRAAYDQYGHAAFEQGGMGGGGGGFGGGADFSDIFGDVFGDIFGGG---RRQRAARGADLRYNMDLTLEEAVRG 132          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEP1 (Chaperone protein dnaJ OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.703e-21
Identity = 54/136 (39.71%), Postives = 77/136 (56.62%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + YYEVL V RGA++  +K+AYR+LA+KYHPD+N G++E+  +F E N AYEVLSD+  R  +D YG  G+   +           N  DI    FS FFGGG         +G D+   L+  LE+   G ++ +
Sbjct:    4 RDYYEVLGVERGATEADLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDASKRAAFDQYGHAGV-DPSMGGGGAGFGGANFSDIFGDVFSDFFGGGRGGGRGGAQRGSDLRYTLELNLEEAVRGTTVSI 138          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEST (Chaperone protein dnaJ OS=Pseudomonas stutzeri GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20
Identity = 56/140 (40.00%), Postives = 78/140 (55.71%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL-KQHAAXXXXXXXXXVNIQDI----FSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + +YEVL V RGAS+ ++K+AYR+LA+K+HPD+N G++ A + F E N AYEVLSD   R  YD YG  G+  Q  A          N  DI    FS FF GG         +G D+   L+  LE+   G ++ +
Sbjct:    1 MAKRDFYEVLGVERGASEAELKKAYRRLAMKHHPDRNPGDKAAEEAFKEANEAYEVLSDPSKRAAYDQYGHAGVDPQMGAGAGGAGYGGANFSDIFGDVFSDFFSGGRGGSRGGAQRGSDLRYTLELDLEEAVRGTTVTI 140          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSEE4 (Chaperone protein dnaJ OS=Pseudomonas entomophila (strain L48) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20
Identity = 56/140 (40.00%), Postives = 79/140 (56.43%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDI----FSSFFGGG-PMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + +YEVL V RGAS+  +K+AYR+LA+KYHPD+N G++E+  +F E N AYEVLSD+  R  YD YG  G+   +           N  DI    FS FFGGG          +G D+   L+  LE+   G ++ +
Sbjct:    1 MAKRDFYEVLGVERGASEGDLKKAYRRLAMKYHPDRNPGDKESEDKFKEANEAYEVLSDTSKRAAYDQYGHAGV-DPSMGGGGAGFGGANFSDIFGDVFSDFFGGGRGGSRSGGAQRGSDLRYTLELNLEEAVRGTTVSI 139          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PSEF55.102e-2140.29Chaperone protein dnaJ OS=Pseudomonas fluorescens ... [more]
DNAJ_PELLD5.102e-2142.65Chaperone protein dnaJ OS=Pelodictyon luteolum (st... [more]
DNAJ_STACT6.664e-2142.96Chaperone protein dnaJ OS=Staphylococcus carnosus ... [more]
DNAJ_KLEP76.664e-2137.12Chaperone protein dnaJ OS=Klebsiella pneumoniae su... [more]
DNAJ_KLEP36.664e-2137.12Chaperone protein dnaJ OS=Klebsiella pneumoniae (s... [more]
DNAJ_ENTS86.664e-2137.23Chaperone protein dnaJ OS=Enterobacter sakazakii (... [more]
DNAJ_EDWI96.664e-2138.52Chaperone protein dnaJ OS=Edwardsiella ictaluri (s... [more]
DNAJ_PSEP18.703e-2139.71Chaperone protein dnaJ OS=Pseudomonas putida (stra... [more]
DNAJ_PSEST1.137e-2040.00Chaperone protein dnaJ OS=Pseudomonas stutzeri GN=... [more]
DNAJ_PSEE41.137e-2040.00Chaperone protein dnaJ OS=Pseudomonas entomophila ... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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