CX296527

Overview
NameCX296527
Unique NameCX296527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length688
Libraries
Library NameType
FerrChloL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PELCD (Chaperone protein dnaJ OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20
Identity = 55/138 (39.86%), Postives = 75/138 (54.35%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVN---IQDIFSSFFG---GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            + YYEVL V R AS+ +IK+AYRKLA+KYHPDKN G++ A  +F EI+ AY +LSD++ R IYD YG  GL                    +D+F   FG   GG   +  +  +GDD+   L    E+   G   K+
Sbjct:    4 RDYYEVLGVHRNASETEIKKAYRKLAIKYHPDKNAGDKAAEDKFKEISEAYSILSDTQQRVIYDQYGHAGLNGGGGGGGSYSSGGFGGTPFEDLFGDIFGDIFGGRGSQRSRGRRGDDLRYNLSINFEEAAFGLETKI 141          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCGA (Chaperone protein dnaJ OS=Mycoplasma gallisepticum GN=dnaJ PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20
Identity = 50/111 (45.05%), Postives = 67/111 (60.36%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXV------------NIQDIFSSFFGGG 540
            + YYE+L+V R A+ + IK+A+RKLA+KYHPD+N+ + +A ++F E+N AYEVLSD E R +YDTYG EGL              V               D+FS FFGGG
Sbjct:    5 RDYYEILEVSRSATQQDIKKAFRKLAMKYHPDRNK-DSDAEEKFKEVNEAYEVLSDEEKRKLYDTYGHEGLNASGFHQGGFNPYDVFNSVFSGFDFEGGFGDVFSQFFGGG 114          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_ANATD (Chaperone protein dnaJ OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.137e-20
Identity = 58/143 (40.56%), Postives = 78/143 (54.55%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGL-KQHAAXXXXXXXXXV----------NIQDIFSSFFGGGPM-----EEDEKIVKGDDVIVELDATLEDLYMG 624
            K YYE+L VPR A++E+IKRAYR+LA +YHPD N GN+EA ++F EIN AYEVLSD E R +YD +G      ++ A                    +  DIF   F G  +        E   KG D+ V+L+ TL++   G
Sbjct:    5 KDYYEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPEKRKLYDQFGHAAFDPKYGAQGSGGFSGGFGGGFADFDFGSFGDIFEDLFEGFDIFGTSRRRKEAPRKGADIYVDLELTLKESVFG 147          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNJA1_DICDI (DnaJ homolog subfamily A member 1 homolog OS=Dictyostelium discoideum GN=dnaja1 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 61/173 (35.26%), Postives = 92/173 (53.18%), Query Frame = 1
Query:  232 VIAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQG--NEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ---HAAXXXXXXXXXVNIQDIFSSFFG--------------------------------GGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            ++  K YYE L V    +++++K+AYRK+A+KYHPDKNQG   + A  +F +I+ AYEVLSD E R +YD+YG EG+K+   HA+          + +D+FS FFG                                GG     +K  KG+D+  E++ +LE+LY G  +K+
Sbjct:    1 MVKEKEYYERLGVKPDCTEDELKKAYRKMAVKYHPDKNQGPGKDAAEAKFKDISEAYEVLSDPEKRKMYDSYGSEGMKESGFHAS----------SAEDLFSHFFGAGGGGGGFSFGGGGGDDFGGFSFGNMGGMGGMGGMGGGHKKRRKGEDIEHEMNRSLEELYNGKLVKI 163          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_PSYIN (Chaperone protein dnaJ OS=Psychromonas ingrahamii (strain 37) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 48/138 (34.78%), Postives = 79/138 (57.25%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPM---EEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A +  YEVL + R A+++++K+AY++LA+KYHPD+  GN+E   +F E+  AYE+L+DS+ +  YD YG +G+ Q                DIF   FGGG        ++  +G D+   ++ TLE+   G S ++
Sbjct:    1 MAKRDCYEVLGISRDATEKEVKKAYKRLAMKYHPDRTSGNDELEVKFKEVKEAYEILNDSQKKAAYDQYGHDGVNQQGRGGFDNSDFGDQFGDIFGDIFGGGRRGGGGGGQRPQQGSDLRYNMELTLEEAVRGISKEI 138          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_NEIG1 (Chaperone protein dnaJ OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 54/135 (40.00%), Postives = 76/135 (56.30%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEE-----GLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            ++ + +Y  L V R A+D++IK+AYRKLA+KYHPD+N  N+EA ++F E+  AYE LSD E R +YD YG       G                +  DIFS  FGGG     +   +G+DV V ++ TLE+   G
Sbjct:    1 MSNQDFYATLGVARAATDDEIKKAYRKLAMKYHPDRNPDNKEAEEKFKEVQKAYETLSDKEKRAMYDQYGHAAFEGGGQGGFGGFGGFGGAQGFDFGDIFSQMFGGG-SGRAQPDYQGEDVQVGIEITLEEAAKG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_ERWT9 (Chaperone protein dnaJ OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 49/142 (34.51%), Postives = 79/142 (55.63%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQ-------HAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMGGSLKV 639
            +A + YYE+L V + A + +IK+AY++LA+K+HPD+NQG++E+  +F EI  AYE+L+D + R  YD YG    +Q       H               D+F   FGGG     ++  +G D+   ++ TLE+   G S ++
Sbjct:    1 MAKRDYYEILGVAKSADEREIKKAYKRLAMKFHPDRNQGDKESEGKFKEIKEAYEILTDGQKRAAYDQYGHAAFEQGGMGGGGHGGFGGGGADFSDIFGDVFGDIFGGG--RRQQRAARGADLRYNMELTLEEAVRGVSKEI 140          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_CHLTE (Chaperone protein dnaJ OS=Chlorobium tepidum GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 63/178 (35.39%), Postives = 89/178 (50.00%), Query Frame = 1
Query:  244 KSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAAXXXXXXXXXV-NIQDIFSSF------------FGGGPMEEDEKI-----------------VKGDDVIVELDATLEDLYMGGSLKVWREKML*ASPRQRRCN 687
            + YYE+L V R A  ++IK+AYRKLALKYHPDKN  N+EA ++F E+N AYEVLS+ + R  YD +G  G+   AA           +I DIFS+F             GG P    E +                 ++G D+ + L  TLE++  G    +  +K++      R CN
Sbjct:    3 RDYYEILGVARSADKDEIKKAYRKLALKYHPDKNPDNKEAEEKFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAASGSGPGGAGYGDINDIFSAFNDMFSGGGGRARTGGSPFSGFEDVFSGGFSGSGSGRRRSAGIQGTDLKIRLKLTLEEIAKGVEKTIKIKKLV----TCRECN 176          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_BORPD (Chaperone protein dnaJ OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 54/134 (40.30%), Postives = 77/134 (57.46%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGEEGLKQHAA---XXXXXXXXXVNIQDIFSSFFGG-GPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYEVL V + A+D+++K+AYRKLA+K+HPD+N  N++A ++F EI  AYEVL D + R  YD YG  G+  +AA                DIF   FGG G      ++ +G D+   L+ TLE    G
Sbjct:    1 MAKRDYYEVLGVAKNATDDELKKAYRKLAMKHHPDRNPDNKDAEEKFKEIKEAYEVLGDEQKRAAYDRYGHAGVDPNAAGMGGAGMGGGFADAFGDIFGEIFGGAGGRRGGAQVYRGADLKYALEITLEQAAHG 134          
BLAST of CX296527 vs. ExPASy Swiss-Prot
Match: DNAJ_ACIAD (Chaperone protein dnaJ OS=Acinetobacter sp. (strain ADP1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.485e-20
Identity = 56/133 (42.11%), Postives = 78/133 (58.65%), Query Frame = 1
Query:  235 IAGKSYYEVLQVPRGASDEQIKRAYRKLALKYHPDKNQGNEEANKRFAEINNAYEVLSDSETRNIYDTYGE---EGLKQHAAXXXXXXXXXVNIQDIFSSFFGGGPMEEDEKIVKGDDVIVELDATLEDLYMG 624
            +A + YYEVL V + ASD++IK+AYRKLA+KYHPD+N  N EA  +F E + AYEVLSDSE R++YD  G    EG                   DIF   FGGG  ++ ++  +G D+   ++ +LE+   G
Sbjct:    1 MAKRDYYEVLGVSKTASDDEIKKAYRKLAMKYHPDRNPDNAEAEDKFKEASEAYEVLSDSEKRSMYDRMGHNAFEGGGGGGFGGFSAEDIFSQFGDIFGGAFGGGGRQQ-QRQRRGSDLRYVMELSLEEAVRG 132          
The following BLAST results are available for this feature:
BLAST of CX296527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_PELCD1.137e-2039.86Chaperone protein dnaJ OS=Pelobacter carbinolicus ... [more]
DNAJ_MYCGA1.137e-2045.05Chaperone protein dnaJ OS=Mycoplasma gallisepticum... [more]
DNAJ_ANATD1.137e-2040.56Chaperone protein dnaJ OS=Anaerocellum thermophilu... [more]
DNJA1_DICDI1.485e-2035.26DnaJ homolog subfamily A member 1 homolog OS=Dicty... [more]
DNAJ_PSYIN1.485e-2034.78Chaperone protein dnaJ OS=Psychromonas ingrahamii ... [more]
DNAJ_NEIG11.485e-2040.00Chaperone protein dnaJ OS=Neisseria gonorrhoeae (s... [more]
DNAJ_ERWT91.485e-2034.51Chaperone protein dnaJ OS=Erwinia tasmaniensis (st... [more]
DNAJ_CHLTE1.485e-2035.39Chaperone protein dnaJ OS=Chlorobium tepidum GN=dn... [more]
DNAJ_BORPD1.485e-2040.30Chaperone protein dnaJ OS=Bordetella petrii (strai... [more]
DNAJ_ACIAD1.485e-2042.11Chaperone protein dnaJ OS=Acinetobacter sp. (strai... [more]

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Properties
Property NameValue
Genbank descriptionC05142E07SK FerrChloL1 Citrus clementina cDNA clone C05142E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX296527 ID=CX296527; Name=CX296527; organism=Citrus clementina; type=EST; length=688bp
GAGGCCTCGTCCCGAATTCGGCACGAGGCAGCAACGACTTCTGAATTGAC
AGATAAAAATTAAAAAGAAAAAAATTATTGTAATCTCAGAATTTTGCTAA
GATCTGAAAATTAAACCCTAGATTCTAAGTTTCGGAGAGGCATTAAACTC
TCTCCTCTTGTTGATCTATTAATGGCGCATCGGCGAGCAAGGCTGTTGTT
CCTATTGTGCGCACTTTGTTACGCCCTCAACGTCATTGCGGGGAAGAGCT
ACTATGAAGTATTGCAAGTGCCGAGGGGAGCATCGGACGAGCAGATCAAA
AGAGCGTATAGAAAGCTGGCATTGAAGTATCATCCTGATAAAAACCAGGG
GAATGAAGAAGCTAATAAGCGATTTGCTGAGATTAACAATGCGTATGAGG
TGTTATCGGATAGCGAAACGAGGAATATATATGATACATATGGAGAAGAG
GGACTGAAACAGCATGCTGCTGGTGGAGGCAGAGGTGGAGGGATGGGAGT
TAACATTCAAGACATTTTCAGCTCTTTCTTTGGTGGAGGTCCAATGGAAG
AGGATGAGAAAATTGTGAAGGGTGATGATGTTATTGTTGAACTGGATGCA
ACATTGGAAGATTTATACATGGGAGGTTCCCTAAAGGTATGGAGAGAGAA
AATGTTATAAGCCAGCCCCAGGCAAAGGCGCTGTAACT
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